ncbi-blast+-legacy - i386

Documentation

Binaries

libxcompress.so

compile units

includes

compress.cpp

unassigned

stream.cpp

unassigned

streambuf.cpp

ncbidiag.inl

unassigned

stream_util.cpp

unassigned

bzip2.cpp

ncbidiag.inl

unassigned

zlib.cpp

ncbidiag.inl

unassigned

unassigned

reader_zlib.cpp

unassigned

tar.cpp

ncbidiag.inl

unassigned

archive.cpp

unassigned

archive_.cpp

unassigned

miniz.c

archive_zip.cpp

libraries


manual

libgeneral.so

compile units

includes

unassigned

Date.cpp

Dbtag.cpp

Date_std.cpp

Int_fuzz.cpp

Name_std.cpp

Object_id.cpp

Person_id.cpp

User_field.cpp

User_object.cpp

typeinfo.inl

objistr.inl

Date_.cpp

Int_fuzz_.cpp

Object_id_.cpp

Person_id_.cpp

User_field_.cpp

Name_std_.cpp

Dbtag_.cpp

Date_std_.cpp

User_object_.cpp

typeref.inl

continfo.inl

typeinfo.inl

NCBI_General_module.cpp

classinfo.inl

unassigned

uoconv.cpp

ncbidiag.inl

typeinfo.inl

choice.inl

objectiter.inl

objectinfo.inl

continfo.inl

memberid.inl

item.inl

memberlist.inl

classinfob.inl

libraries


manual

libseqmasks_io.so

compile units

includes

mask_cmdline_args.cpp

unassigned

mask_bdb_reader.cpp

unassigned

mask_fasta_reader.cpp

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mask_writer.cpp

unassigned

mask_writer_fasta.cpp

unassigned

mask_writer_int.cpp

unassigned

mask_writer_tab.cpp

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mask_writer_seqloc.cpp

unassigned

mask_writer_blastdb_maskinfo.cpp

libraries


manual

libxalgodustmask.so

compile units

includes

unassigned

symdust.cpp

libraries


manual

libgenome_collection.so

compile units

includes

unassigned

GC_Assemblies.cpp

typeinfo.inl

objectinfo.inl

GC_AssemblyDesc.cpp

GC_AssemblySet.cpp

GC_AssemblyUnit.cpp

GC_DbTagAlias.cpp

GC_External_Seqid.cpp

GC_Genome.cpp

GC_GenomicPart.cpp

GC_Project.cpp

GC_Query.cpp

GC_Replicon.cpp

GC_Scaf_stats.cpp

GC_SeqIdAlias.cpp

GC_Sequence.cpp

GC_SequenceStats.cpp

GC_TaggedSequences.cpp

GC_TypedSeqId.cpp

GC_Assembly.cpp

ncbimtx.inl

memberid.inl

item.inl

GC_Assembly_.cpp

GC_GenomicPart_.cpp

GC_Scaf_stats_.cpp

GC_TypedSeqId_.cpp

typeref.inl

continfo.inl

typeinfo.inl

GC_SeqIdAlias_.cpp

GC_DbTagAlias_.cpp

GC_Replicon_.cpp

GC_Query_.cpp

GC_Project_.cpp

GC_External_Seqid_.cpp

GC_Assemblies_.cpp

GC_AssemblyDesc_.cpp

GC_AssemblySet_.cpp

GC_AssemblyUnit_.cpp

GC_Genome_.cpp

GC_Sequence_.cpp

GC_SequenceStats_.cpp

GC_TaggedSequences_.cpp

GC_SequenceRole_.cpp

NCBI_GenomeCollection_module.cpp

classinfo.inl

libraries


manual

libblast_services.so

compile units

includes

unassigned

blast_services.cpp

ncbidiag.inl

ncbimtx.inl

libraries


manual

libtest_boost.so

compile units

includes

unassigned

test_boost.cpp

ncbidiag.inl

libraries


manual

libseqsplit.so

compile units

includes

ID2S_Bioseq_Ids.cpp

ID2S_Bioseq_Info.cpp

ID2S_Bioseq_place_Info.cpp

ID2S_Bioseq_set_Ids.cpp

ID2S_Bioseqs_Info.cpp

ID2S_Chunk.cpp

ID2S_Chunk_Content.cpp

ID2S_Chunk_Data.cpp

ID2S_Chunk_Info.cpp

ID2S_Feat_type_Info.cpp

ID2S_Gi_Interval.cpp

ID2S_Gi_Ints.cpp

ID2S_Gi_Range.cpp

ID2S_Interval.cpp

ID2S_Seq_annot_Info.cpp

ID2S_Seq_annot_place_Info.cpp

ID2S_Seq_assembly_Info.cpp

ID2S_Seq_descr_Info.cpp

ID2S_Seq_feat_Ids_Info.cpp

ID2S_Seq_id_Interval.cpp

ID2S_Seq_id_Ints.cpp

ID2S_Seq_loc.cpp

ID2S_Sequence_Piece.cpp

ID2S_Split_Info.cpp

ID2S_Bioseq_Info_.cpp

ID2S_Chunk_Content_.cpp

ID2S_Gi_Interval_.cpp

ID2S_Gi_Range_.cpp

ID2S_Interval_.cpp

ID2S_Seq_loc_.cpp

ID2S_Seq_id_Interval_.cpp

ID2S_Seq_descr_Info_.cpp

ID2S_Seq_assembly_Info_.cpp

ID2S_Bioseqs_Info_.cpp

ID2S_Bioseq_place_Info_.cpp

ID2S_Feat_type_Info_.cpp

ID2S_Bioseq_set_Ids_.cpp

typeref.inl

continfo.inl

typeinfo.inl

ID2S_Seq_annot_place_Info_.cpp

ID2S_Bioseq_Ids_.cpp

ID2S_Chunk_.cpp

ID2S_Chunk_Data_.cpp

ID2S_Chunk_Info_.cpp

ID2S_Gi_Ints_.cpp

ID2S_Seq_annot_Info_.cpp

ID2S_Seq_feat_Ids_Info_.cpp

ID2S_Seq_id_Ints_.cpp

ID2S_Sequence_Piece_.cpp

ID2S_Split_Info_.cpp

ID2S_Seq_map_Info_.cpp

ID2S_Seq_data_Info_.cpp

ID2S_Chunk_Id_.cpp

NCBI_Seq_split_module.cpp

classinfo.inl

libraries


manual

libseqdb.so

compile units

includes

unassigned

seqdb.cpp

ncbidiag.inl

unassigned

seqdbbitset.cpp

unassigned

seqdbfilter.cpp

unassigned

seqdbatlas.cpp

ncbimtx.inl

unassigned

seqdbalias.cpp

ncbimtx.inl

unassigned

seqdbcommon.cpp

unassigned

seqdbfile.cpp

ncbimtx.inl

unassigned

seqdbimpl.cpp

ncbimtx.inl

unassigned

seqdbvol.cpp

ncbimtx.inl

unassigned

seqdbvolset.cpp

ncbimtx.inl

unassigned

seqdboidlist.cpp

ncbimtx.inl

unassigned

seqdbisam.cpp

ncbimtx.inl

unassigned

seqdbtax.cpp

ncbimtx.inl

ncbidiag.inl

seqdbgilistset.cpp

ncbimtx.inl

seqdbexpert.cpp

unassigned

seqdbblob.cpp

unassigned

seqdbcol.cpp

ncbimtx.inl

unassigned

seqdbgimask.cpp

ncbimtx.inl

unassigned

seqdbobj.cpp

libraries


manual

libid2.so

compile units

includes

ID2S_Reply_Get_Chunk.cpp

ID2S_Reply_Get_Split_Info.cpp

ID2S_Request_Get_Chunks.cpp

ID2_Blob_Id.cpp

ID2_Blob_Seq_id.cpp

ID2_Blob_Seq_ids.cpp

ID2_Error.cpp

ID2_Get_Blob_Details.cpp

ID2_Param.cpp

ID2_Params.cpp

ID2_Reply.cpp

ID2_Reply_Data.cpp

ID2_Reply_Get_Blob.cpp

ID2_Reply_Get_Blob_Id.cpp

ID2_Reply_Get_Blob_Seq_ids.cpp

ID2_Reply_Get_Package.cpp

ID2_Reply_Get_Seq_id.cpp

ID2_Reply_ReGet_Blob.cpp

ID2_Request.cpp

ID2_Request_Get_Blob_Id.cpp

ID2_Request_Get_Blob_Info.cpp

ID2_Request_Get_Packages.cpp

ID2_Request_Get_Seq_id.cpp

ID2_Request_Packet.cpp

ID2_Request_ReGet_Blob.cpp

ID2_Seq_id.cpp

ID2_Blob_Id_.cpp

ID2_Seq_id_.cpp

ID2_Request_ReGet_Blob_.cpp

ID2_Request_Get_Seq_id_.cpp

ID2_Request_Get_Blob_Info_.cpp

ID2_Request_.cpp

ID2_Reply_ReGet_Blob_.cpp

ID2_Reply_Get_Blob_Seq_ids_.cpp

ID2_Reply_Get_Blob_.cpp

ID2_Reply_Data_.cpp

ID2_Get_Blob_Details_.cpp

ID2_Blob_Seq_id_.cpp

ID2S_Request_Get_Chunks_.cpp

ID2S_Reply_Get_Split_Info_.cpp

ID2S_Reply_Get_Chunk_.cpp

typeref.inl

continfo.inl

typeinfo.inl

ID2_Reply_Get_Package_.cpp

ID2_Error_.cpp

ID2_Blob_Seq_ids_.cpp

ID2_Param_.cpp

ID2_Params_.cpp

ID2_Reply_.cpp

ID2_Reply_Get_Blob_Id_.cpp

ID2_Reply_Get_Seq_id_.cpp

ID2_Request_Get_Blob_Id_.cpp

ID2_Request_Get_Packages_.cpp

ID2_Request_Packet_.cpp

ID2_Blob_State_.cpp

NCBI_ID2Access_module.cpp

classinfo.inl

libraries


manual

libseqcode.so

compile units

includes

Seq_code_set.cpp

Seq_code_table.cpp

Seq_map_table.cpp

unassigned

typeref.inl

continfo.inl

typeinfo.inl

Seq_map_table_.cpp

Seq_code_table_.cpp

Seq_code_set_.cpp

Seq_code_type_.cpp

NCBI_SeqCode_module.cpp

classinfo.inl

libraries


manual

libxobjutil.so

compile units

includes

unassigned

weight.cpp

unassigned

sequence.cpp

typeinfo.inl

objectinfo.inl

ncbidiag.inl

memberid.inl

item.inl

unassigned

feature.cpp

typeinfo.inl

ncbidiag.inl

unassigned

seqtitle.cpp

typeinfo.inl

objectinfo.inl

memberid.inl

item.inl

unassigned

create_defline.cpp

ncbidiag.inl

unassigned

obj_sniff.cpp

ncbidiag.inl

objectinfo.inl

typeinfo.inl

objistr.inl

unassigned

seq_loc_util.cpp

typeinfo.inl

objectinfo.inl

memberid.inl

item.inl

unassigned

seq_align_util.cpp

unassigned

seq_trimmer.cpp

typeinfo.inl

unassigned

bioseqgaps_ci.cpp

libraries


manual

libxnetblastcli.so

compile units

includes

unassigned

blastclient.cpp

ncbidiag.inl

ncbimtx.inl

unassigned

blastclient_.cpp

ncbimtx.inl

ncbidiag.inl

libraries


manual

libpub.so

compile units

includes

Pub.cpp

Pub_equiv.cpp

Pub_set.cpp

Pub_.cpp

Pub_set_.cpp

typeref.inl

typeinfo.inl

continfo.inl

Pub_equiv_.cpp

NCBI_Pub_module.cpp

classinfo.inl

libraries


manual

libxobjread.so

compile units

includes

unassigned

read_util.cpp

unassigned

format_guess_ex.cpp

ncbidiag.inl

unassigned

acc_pattern.cpp

unassigned

agp_read.cpp

unassigned

agp_seq_entry.cpp

unassigned

agp_util.cpp

agp_validate_reader.cpp

unassigned

aln_reader.cpp

ncbidiag.inl

unassigned

bed_reader.cpp

unassigned

cigar.cpp

unassigned

fasta.cpp

ncbidiag.inl

unassigned

fasta_aln_builder.cpp

unassigned

getfeature.cpp

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gff_reader.cpp

typeinfo.inl

objectinfo.inl

ncbidiag.inl

memberid.inl

item.inl

unassigned

reader_data.cpp

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microarray_reader.cpp

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ncbidiag.inl

phrap.cpp

unassigned

reader_base.cpp

ncbidiag.inl

unassigned

readfeat.cpp

typeinfo.inl

objectinfo.inl

ncbidiag.inl

memberid.inl

item.inl

unassigned

rm_reader.cpp

ncbidiag.inl

unassigned

wiggle_reader.cpp

ncbidiag.inl

unassigned

gff3_sofa.cpp

unassigned

gff3_reader.cpp

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gtf_reader.cpp

unassigned

gff2_data.cpp

unassigned

gff2_reader.cpp

typeinfo.inl

objectinfo.inl

memberid.inl

item.inl

unassigned

gvf_reader.cpp

ncbidiag.inl

unassigned

vcf_reader.cpp

unassigned

best_feat_finder.cpp

unassigned

source_mod_parser.cpp

ncbimtx.inl

unassigned

fasta_exception.cpp

unassigned

agp_converter.cpp

typeinfo.inl

objostr.inl

unassigned

message_listener.cpp

unassigned

line_error.cpp

libraries


manual

libxconnect.so

compile units

includes

ncbi_lbsm.c

ncbi_lbsm_ipc.c

ncbi_lbsmd.c

ncbi_ansi_ext.c

ncbi_buffer.c

ncbi_types.c

ncbi_priv.c

ncbi_core.c

ncbi_util.c

ncbi_socket.c

ncbi_strerror.c

ncbi_connutil.c

ncbi_connection.c

ncbi_connector.c

ncbi_socket_connector.c

ncbi_file_connector.c

ncbi_http_connector.c

ncbi_memory_connector.c

ncbi_heapmgr.c

ncbi_server_info.c

ncbi_service.c

ncbi_host_info.c

ncbi_dispd.c

ncbi_service_connector.c

ncbi_sendmail.c

ncbi_ftp_connector.c

ncbi_lb.c

ncbi_local.c

ncbi_base64.c

ncbi_version.c

unassigned

ncbi_socket_cxx.cpp

unassigned

ncbi_core_cxx.cpp

ncbidiag.inl

unassigned

email_diag_handler.cpp

unassigned

ncbi_conn_streambuf.cpp

ncbidiag.inl

unassigned

ncbi_conn_stream.cpp

unassigned

ncbi_conn_test.cpp

ncbi_misc.cpp

ncbi_namedpipe.cpp

ncbidiag.inl

ncbi_namedpipe_connector.cpp

unassigned

ncbi_pipe.cpp

ncbidiag.inl

ncbi_pipe_connector.cpp

unassigned

ncbi_conn_reader_writer.cpp

unassigned

ncbi_userhost.cpp

ncbidiag.inl

libraries


manual

libsequtil.so

compile units

includes

unassigned

sequtil.cpp

unassigned

sequtil_convert.cpp

unassigned

sequtil_convert_imp.cpp

unassigned

sequtil_manip.cpp

sequtil_tables.cpp

sequtil_shared.cpp

libraries


manual

libxser.so

compile units

includes

hookdata.cpp

unassigned

hookdatakey.cpp

typeinfo.cpp

objectinfo.inl

typeinfo.inl

objcopy.inl

unassigned

objectinfo.cpp

objectinfo.inl

typeref.inl

continfo.inl

ptrinfo.inl

classinfob.inl

stdtypes.inl

choice.inl

typeinfo.inl

member.inl

item.inl

variant.inl

objectiter.inl

memberlist.inl

classinfo.inl

unassigned

objectiter.cpp

typeref.inl

continfo.inl

objectiter.inl

member.inl

item.inl

variant.inl

choice.inl

memberlist.inl

classinfob.inl

classinfo.inl

memberid.inl

objectinfo.inl

unassigned

objstack.inl

objectio.cpp

typeref.inl

continfo.inl

item.inl

objectinfo.inl

objistr.inl

typeinfo.inl

objectiter.inl

objectio.inl

objostr.inl

memberlist.inl

classinfob.inl

classinfo.inl

objcopy.inl

typeref.cpp

typeref.inl

typemap.cpp

unassigned

objistr.inl

stdtypes.cpp

objcopy.inl

objostr.inl

stdtypes.inl

enumerated.cpp

stdtypes.inl

typeinfo.inl

objcopy.inl

ptrinfo.cpp

typeref.inl

typeinfo.inl

ptrinfo.inl

objistr.inl

autoptrinfo.cpp

typeref.inl

ptrinfo.inl

typeinfo.inl

objistr.inl

objostr.inl

continfo.cpp

typeref.inl

typeinfo.inl

continfo.inl

objcopy.inl

ptrinfo.inl

ncbidiag.inl

stltypes.cpp

typeref.inl

unassigned

memberid.cpp

memberid.inl

unassigned

memberlist.cpp

typeref.inl

memberid.inl

item.inl

ptrinfo.inl

typeinfo.inl

member.inl

memberlist.inl

classinfob.inl

continfo.inl

item.cpp

typeref.inl

item.inl

classinfob.cpp

typeref.inl

typeinfo.inl

item.inl

objectinfo.inl

classinfob.inl

memberlist.inl

unassigned

member.cpp

typeref.inl

item.inl

member.inl

typeinfo.inl

objistr.inl

objcopy.inl

objostr.inl

objectinfo.inl

objectiter.inl

memberid.inl

continfo.inl

objstack.inl

ncbidiag.inl

ptrinfo.inl

memberlist.inl

classinfob.inl

classinfo.inl

classinfo.cpp

objostr.inl

objcopy.inl

member.inl

typeref.inl

item.inl

classinfo.inl

memberlist.inl

typeinfo.inl

classinfob.inl

memberid.inl

unassigned

variant.cpp

ptrinfo.inl

variant.inl

choice.inl

typeref.inl

typeinfo.inl

item.inl

objistr.inl

objcopy.inl

objectinfo.inl

objectiter.inl

objstack.inl

objostr.inl

classinfob.inl

choice.cpp

choice.inl

objcopy.inl

typeref.inl

member.inl

memberlist.inl

variant.inl

item.inl

objstack.inl

objistr.inl

classinfob.inl

typeinfo.inl

memberid.inl

choiceptr.cpp

ptrinfo.inl

typeref.inl

typeinfo.inl

item.inl

classinfo.inl

classinfob.inl

ncbidiag.inl

memberlist.inl

choice.inl

objcopy.inl

aliasinfo.cpp

typeref.inl

ptrinfo.inl

objcopy.inl

typeinfo.inl

unassigned

objistr.inl

objistr.cpp

typeinfo.inl

typeref.inl

ptrinfo.inl

strbuffer.inl

ncbidiag.inl

objstack.inl

item.inl

variant.inl

member.inl

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objectinfo.inl

objectiter.inl

classinfob.inl

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objlist.inl

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objostr.cpp

typeinfo.inl

typeref.inl

ptrinfo.inl

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strbuffer.inl

objectinfo.inl

objectiter.inl

classinfob.inl

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choice.inl

objlist.inl

memberid.inl

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objstack.inl

objcopy.cpp

objectinfo.inl

typeinfo.inl

objostr.inl

objcopy.inl

objistr.inl

objlist.inl

unassigned

iterator.cpp

continfo.inl

objectiter.inl

objectinfo.inl

typeinfo.inl

choice.inl

typeref.inl

item.inl

memberid.inl

memberlist.inl

classinfob.inl

classinfo.inl

unassigned

serial.cpp

typeref.inl

typeinfo.inl

ptrinfo.inl

choice.inl

classinfob.inl

continfo.inl

item.inl

memberlist.inl

classinfo.inl

objectinfo.inl

objectiter.inl

delaybuf.cpp

objistr.inl

item.inl

unassigned

objectiter.inl

objectinfo.inl

pack_string.cpp

unassigned

exception.cpp

objhook.cpp

objectiter.inl

member.inl

objectinfo.inl

typeinfo.inl

typeref.inl

item.inl

variant.inl

memberlist.inl

classinfob.inl

classinfo.inl

choice.inl

unassigned

objlist.cpp

objlist.inl

objstack.cpp

objstack.inl

memberid.inl

objostrasn.cpp

strbuffer.inl

objostr.inl

objistr.inl

objstack.inl

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continfo.inl

ptrinfo.inl

ncbidiag.inl

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objcopy.inl

classinfob.inl

classinfo.inl

choice.inl

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objistr.inl

objistrasn.cpp

objstack.inl

strbuffer.inl

classinfob.inl

item.inl

member.inl

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typeref.inl

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classinfo.inl

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memberid.inl

objostrasnb.cpp

strbuffer.inl

objstack.inl

objistr.inl

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objstrasnb.inl

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item.inl

objcopy.inl

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typeref.inl

ptrinfo.inl

ncbidiag.inl

objistrasnb.inl

objostr.inl

classinfob.inl

classinfo.inl

choice.inl

memberid.inl

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objistr.inl

objistrasnb.cpp

objistrasnb.inl

strbuffer.inl

ncbidiag.inl

objstack.inl

objstrasnb.inl

classinfob.inl

choice.inl

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item.inl

memberlist.inl

memberid.inl

typeinfo.inl

variant.inl

member.inl

continfo.inl

objectinfo.inl

classinfo.inl

objlist.inl

objostrxml.cpp

strbuffer.inl

objostr.inl

objstack.inl

member.inl

memberlist.inl

typeinfo.inl

objostrxml.inl

typeref.inl

ptrinfo.inl

objectinfo.inl

continfo.inl

ncbidiag.inl

choice.inl

item.inl

variant.inl

classinfob.inl

classinfo.inl

memberid.inl

objcopy.inl

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objistr.inl

objistrxml.cpp

strbuffer.inl

typeref.inl

objstack.inl

typeinfo.inl

objistrxml.inl

ptrinfo.inl

memberlist.inl

objectinfo.inl

item.inl

classinfob.inl

continfo.inl

classinfo.inl

choice.inl

memberid.inl

objostrjson.cpp

objstack.inl

strbuffer.inl

objostr.inl

memberid.inl

unassigned

objistr.inl

objistrjson.cpp

objstack.inl

strbuffer.inl

memberlist.inl

item.inl

memberid.inl

typeref.inl

classinfob.inl

typeinfo.inl

classinfo.inl

choice.inl

unassigned

serializable.cpp

unassigned

serialobject.cpp

typeref.inl

ptrinfo.inl

ncbidiag.inl

objostr.inl

objistr.inl

memberid.inl

typeinfo.inl

item.inl

memberlist.inl

classinfob.inl

objectinfo.inl

unassigned

pathhook.cpp

objstack.inl

classinfob.inl

typeref.inl

item.inl

memberlist.inl

memberid.inl

libraries


manual

libxnetblast.so

compile units

includes

Bla_com_opt_db_res_by_orga.cpp

Blas_comm_opti_disco_megab.cpp

Blas_comm_opti_nucle_query.cpp

Blas_comm_opti_query_filte.cpp

Blas_comm_opti_repea_filte.cpp

Blas_get_searc_resul_reply.cpp

Blas_get_searc_resul_reque.cpp

Blas_get_searc_statu_reply.cpp

Blas_get_searc_statu_reque.cpp

Blas_get_searc_strat_reque.cpp

Blas_get_windo_taxid_reply.cpp

Blas_queu_searc_reque_lite.cpp

Blast4_alignment_for_query.cpp

Blast4_archive.cpp

Blast4_common_options.cpp

Blast4_cutoff.cpp

Blast4_database.cpp

Blast4_database_info.cpp

Blast4_error.cpp

Blast4_get_databa_ex_reply.cpp

Blast4_get_databases_reply.cpp

Blast4_get_matrices_reply.cpp

Blast4_get_parameter_reply.cpp

Blast4_get_paramsets_reply.cpp

Blast4_get_programs_reply.cpp

Blast4_get_queries_reply.cpp

Blast4_get_seq_parts_reply.cpp

Blast4_get_sequenc_request.cpp

Blast4_get_sequences_reply.cpp

Blast4_ka_block.cpp

Blast4_mask.cpp

Blast4_matrix_id.cpp

Blast4_options_lite.cpp

Blast4_parameter.cpp

Blast4_parameter_info.cpp

Blast4_parameters.cpp

Blast4_phi_alignments.cpp

Blast4_program_info.cpp

Blast4_queries.cpp

Blast4_queue_search_reply.cpp

Blast4_queue_search_reques.cpp

Blast4_range.cpp

Blast4_reply.cpp

Blast4_reply_body.cpp

Blast4_request.cpp

Blast4_request_body.cpp

Blast4_seq_part_data.cpp

Blast4_simple_alignment.cpp

Blast4_simple_results.cpp

Blast4_subject.cpp

Blast4_task_info.cpp

Blast4_value.cpp

Blast_commo_optio_db_restr.cpp

Blast_common_option_scorin.cpp

Blast_finish_params_reques.cpp

Blast_get_databa_ex_reques.cpp

Blast_get_reque_info_reply.cpp

Blast_get_reque_info_reque.cpp

Blast_get_searc_info_reply.cpp

Blast_get_searc_info_reque.cpp

Blast_get_seq_parts_reques.cpp

Bla_com_opt_db_res_by_orga_.cpp

Blas_comm_opti_disco_megab_.cpp

Blas_comm_opti_repea_filte_.cpp

Blast4_cutoff_.cpp

Blast4_ka_block_.cpp

Blast4_queries_.cpp

Blast4_range_.cpp

Blast4_reply_body_.cpp

Blast4_request_body_.cpp

Blast4_subject_.cpp

Blast4_value_.cpp

Blast_get_reque_info_reque_.cpp

Blast_common_option_scorin_.cpp

Blast4_task_info_.cpp

Blast4_queue_search_reply_.cpp

Blast4_parameter_info_.cpp

Blast4_matrix_id_.cpp

Blast4_error_.cpp

Blast4_database_.cpp

Blas_get_searc_strat_reque_.cpp

Blas_get_searc_statu_reque_.cpp

Blas_get_searc_statu_reply_.cpp

Blas_get_searc_resul_reque_.cpp

Blast_get_searc_info_reque_.cpp

Blast_get_searc_info_reply_.cpp

Blast_get_reque_info_reply_.cpp

Blast_get_databa_ex_reques_.cpp

Blast_finish_params_reques_.cpp

Blast_commo_optio_db_restr_.cpp

Blast4_simple_alignment_.cpp

Blast4_seq_part_data_.cpp

Blast4_request_.cpp

Blast4_queue_search_reques_.cpp

Blast4_parameter_.cpp

Blast4_options_lite_.cpp

Blast4_get_queries_reply_.cpp

Blast4_database_info_.cpp

Blast4_common_options_.cpp

Blast4_archive_.cpp

Blas_queu_searc_reque_lite_.cpp

Blas_comm_opti_nucle_query_.cpp

typeref.inl

continfo.inl

typeinfo.inl

Blas_comm_opti_query_filte_.cpp

Blas_get_searc_resul_reply_.cpp

Blas_get_windo_taxid_reply_.cpp

Blast4_alignment_for_query_.cpp

Blast4_get_databa_ex_reply_.cpp

Blast4_get_databases_reply_.cpp

Blast4_get_matrices_reply_.cpp

Blast4_get_parameter_reply_.cpp

Blast4_get_paramsets_reply_.cpp

Blast4_get_programs_reply_.cpp

Blast4_get_seq_parts_reply_.cpp

Blast4_get_sequenc_request_.cpp

Blast4_get_sequences_reply_.cpp

Blast4_mask_.cpp

Blast4_parameters_.cpp

Blast4_phi_alignments_.cpp

Blast4_program_info_.cpp

Blast4_reply_.cpp

Blast4_simple_results_.cpp

Blast_get_seq_parts_reques_.cpp

Blast4_strand_type_.cpp

Blast4_seqtech_.cpp

Blast4_result_types_.cpp

Blast4_residue_type_.cpp

Blast_get_proto_info_reque_.cpp

Blast_get_proto_info_reply_.cpp

Blast4_frame_type_.cpp

Blast4_finish_params_reply_.cpp

Blast4_error_flags_.cpp

Blast4_error_code_.cpp

Blas_get_searc_strat_reply_.cpp

NCBI_Blast4_module.cpp

classinfo.inl

unassigned

names.cpp

ncbidiag.inl

libraries


manual

libxalgowinmask.so

compile units

includes

unassigned

seq_masker.cpp

ncbidiag.inl

seq_masker_score_mean.cpp

ncbidiag.inl

unassigned

seq_masker_score_mean_glob.cpp

ncbidiag.inl

unassigned

seq_masker_score_min.cpp

ncbidiag.inl

seq_masker_util.cpp

unassigned

seq_masker_window.cpp

unassigned

seq_masker_window_ambig.cpp

unassigned

seq_masker_window_pattern.cpp

unassigned

seq_masker_window_pattern_ambig.cpp

unassigned

seq_masker_ostat_factory.cpp

unassigned

seq_masker_ostat.cpp

unassigned

seq_masker_ostat_ascii.cpp

unassigned

seq_masker_istat_ascii.cpp

ncbidiag.inl

unassigned

seq_masker_uset_simple.cpp

unassigned

seq_masker_istat_factory.cpp

ncbidiag.inl

unassigned

seq_masker_ostat_bin.cpp

ncbidiag.inl

unassigned

seq_masker_uset_array.cpp

unassigned

seq_masker_istat_bin.cpp

ncbidiag.inl

unassigned

seq_masker_ostat_opt.cpp

ncbidiag.inl

unassigned

seq_masker_ostat_opt_ascii.cpp

unassigned

seq_masker_uset_hash.cpp

unassigned

seq_masker_istat_oascii.cpp

ncbidiag.inl

unassigned

seq_masker_ostat_opt_bin.cpp

unassigned

seq_masker_istat_obinary.cpp

ncbidiag.inl

seq_masker_cache_boost.cpp

ncbidiag.inl

unassigned

win_mask_counts_converter.cpp

ncbidiag.inl

unassigned

win_mask_dup_table.cpp

ncbidiag.inl

unassigned

win_mask_gen_counts.cpp

ncbidiag.inl

unassigned

win_mask_util.cpp

ncbidiag.inl

unassigned

win_mask_config.cpp

libraries


manual

project_tree_builder

compile units

includes

unassigned

file_contents.cpp

ncbidiag.inl

unassigned

msvc_configure.cpp

ncbidiag.inl

unassigned

msvc_makefile.cpp

unassigned

msvc_masterproject_generator.cpp

unassigned

msvc_prj_generator.cpp

unassigned

msvc_prj_utils.cpp

ncbidiag.inl

unassigned

ncbidiag.inl

msvc_project_context.cpp

unassigned

msvc_site.cpp

ncbidiag.inl

unassigned

msvc_sln_generator.cpp

unassigned

proj_builder_app.cpp

ncbidiag.inl

unassigned

proj_datatool_generated_src.cpp

unassigned

proj_item.cpp

unassigned

proj_tree.cpp

ncbidiag.inl

unassigned

ncbidiag.inl

proj_tree_builder.cpp

unassigned

proj_src_resolver.cpp

unassigned

proj_utils.cpp

unassigned

resolver.cpp

ncbidiag.inl

unassigned

msvc_configure_prj_generator.cpp

unassigned

proj_projects.cpp

unassigned

msvc_dlls_info.cpp

ncbidiag.inl

unassigned

msvc_prj_files_collector.cpp

ncbidiag.inl

unassigned

configurable_file.cpp

ncbidiag.inl

unassigned

ptb_gui.cpp

unassigned

ptb_registry.cpp

unassigned

mac_prj_generator.cpp

unassigned

prj_file_collector.cpp

libraries


manual

libid1.so

compile units

includes

ID1SeqEntry_info.cpp

ID1Seq_hist.cpp

ID1blob_info.cpp

ID1server_back.cpp

ID1server_debug.cpp

ID1server_maxcomplex.cpp

ID1server_request.cpp

ID1server_back_.cpp

ID1server_request_.cpp

ID1Seq_hist_.cpp

ID1SeqEntry_info_.cpp

ID1server_maxcomplex_.cpp

ID1blob_info_.cpp

typeref.inl

typeinfo.inl

continfo.inl

ID1server_debug_.cpp

Entry_complexities_.cpp

NCBI_ID1Access_module.cpp

classinfo.inl

libraries


manual

libcomposition_adjustment.so

compile units

includes

compo_heap.c

compo_mode_condition.c

composition_adjustment.c

matrix_frequency_data.c

nlm_linear_algebra.c

optimize_target_freq.c

redo_alignment.c

smith_waterman.c

unified_pvalues.c

libraries


manual

libvariation.so

compile units

includes

VariantPlacement.cpp

Variation.cpp

VariationException.cpp

VariationMethod.cpp

unassigned

typeref.inl

continfo.inl

typeinfo.inl

VariationMethod_.cpp

Variation_.cpp

VariationException_.cpp

VariantPlacement_.cpp

NCBI_VariationPackage_module.cpp

classinfo.inl

libraries


manual

libtest_mt.so

compile units

includes

unassigned

test_mt.cpp

ncbimtx.inl

ncbidiag.inl

libraries


manual

libblastdb.so

compile units

includes

Blast_db_mask_info.cpp

Blast_def_line.cpp

Blast_def_line_set.cpp

Blast_mask_list.cpp

unassigned

Blast_db_mask_info_.cpp

typeref.inl

continfo.inl

typeinfo.inl

Blast_def_line_.cpp

Blast_def_line_set_.cpp

Blast_mask_list_.cpp

Blast_filter_program_.cpp

NCBI_BlastDL_module.cpp

classinfo.inl

libraries


manual

libscoremat.so

compile units

includes

BlockProperty.cpp

CoreBlock.cpp

CoreDef.cpp

FormatRpsDbParameters.cpp

LoopConstraint.cpp

Pssm.cpp

PssmFinalData.cpp

PssmIntermediateData.cpp

PssmParameters.cpp

PssmWithParameters.cpp

Site_annot.cpp

Site_annot_set.cpp

LoopConstraint_.cpp

PssmIntermediateData_.cpp

PssmFinalData_.cpp

FormatRpsDbParameters_.cpp

BlockProperty_.cpp

PssmWithParameters_.cpp

PssmParameters_.cpp

typeref.inl

continfo.inl

typeinfo.inl

CoreBlock_.cpp

CoreDef_.cpp

Pssm_.cpp

Site_annot_.cpp

Site_annot_set_.cpp

NCBI_ScoreMat_module.cpp

classinfo.inl

libraries


manual

libxutil.so

compile units

includes

unassigned

random_gen.cpp

unassigned

utf8.cpp

unassigned

checksum.cpp

bytesrc.cpp

ncbidiag.inl

unassigned

ncbidiag.inl

strbuffer.cpp

strbuffer.inl

itree.cpp

itree.inl

unassigned

smalldns.cpp

ncbidiag.inl

unassigned

thread_pool_old.cpp

ncbidiag.inl

ncbimtx.inl

unassigned

ddump_viewer.cpp

unassigned

strsearch.cpp

logrotate.cpp

unassigned

format_guess.cpp

ascii85.cpp

unassigned

md5.cpp

file_obsolete.cpp

ncbidiag.inl

unicode.cpp

ncbidiag.inl

unicode_plans.inl

unassigned

dictionary.cpp

unassigned

dictionary_util.cpp

thread_nonstop.cpp

unassigned

sgml_entity.cpp

unassigned

static_set.cpp

ncbidiag.inl

transmissionrw.cpp

ncbi_erf.c

unassigned

ncbimtx.inl

mutex_pool.cpp

unassigned

ncbi_cache.cpp

line_reader.cpp

ncbidiag.inl

unassigned

util_exception.cpp

ncbidiag.inl

uttp.cpp

multi_writer.cpp

unassigned

itransaction.cpp

ncbimtx.inl

thread_pool.cpp

ncbimtx.inl

ncbidiag.inl

unassigned

thread_pool_ctrl.cpp

ncbidiag.inl

ncbimtx.inl

scheduler.cpp

ncbidiag.inl

ncbimtx.inl

unassigned

distribution.cpp

unassigned

util_misc.cpp

ncbimtx.inl

unassigned

ncbi_url.cpp

unassigned

histogram_binning.cpp

unassigned

table_printer.cpp

libraries


manual

libxblast.so

compile units

includes

unassigned

blast_aux.cpp

unassigned

blast_options_cxx.cpp

unassigned

blast_options_local_priv.cpp

unassigned

blast_options_builder.cpp

unassigned

blast_setup_cxx.cpp

blast_seqalign.cpp

unassigned

blast_options_handle.cpp

blast_nucl_options.cpp

unassigned

disc_nucl_options.cpp

blast_prot_options.cpp

unassigned

psiblast_options.cpp

blast_rps_options.cpp

unassigned

blastx_options.cpp

unassigned

tblastx_options.cpp

unassigned

tblastn_options.cpp

unassigned

rpstblastn_options.cpp

unassigned

phiblast_nucl_options.cpp

unassigned

phiblast_prot_options.cpp

unassigned

pssm_engine.cpp

unassigned

local_blast.cpp

unassigned

remote_blast.cpp

typeinfo.inl

objectinfo.inl

ncbidiag.inl

ncbimtx.inl

memberid.inl

item.inl

unassigned

seqinfosrc_seqvec.cpp

unassigned

seqinfosrc_seqdb.cpp

unassigned

seqinfosrc_bioseq.cpp

seqsrc_multiseq.cpp

unassigned

seqsrc_seqdb.cpp

unassigned

seqsrc_query_factory.cpp

unassigned

bl2seq.cpp

unassigned

blast_objmgr_tools.cpp

unassigned

repeats_filter_cxx.cpp

blast_mtlock.cpp

ncbimtx.inl

unassigned

psibl2seq.cpp

unassigned

local_db_adapter.cpp

unassigned

psiblast.cpp

unassigned

psiblast_impl.cpp

unassigned

psiblast_iteration.cpp

unassigned

psi_pssm_input.cpp

ncbidiag.inl

unassigned

msa_pssm_input.cpp

typeinfo.inl

objectinfo.inl

memberid.inl

item.inl

unassigned

psiblast_aux_priv.cpp

unassigned

blast_aux_priv.cpp

unassigned

blast_advprot_options.cpp

version.cpp

unassigned

dust_filter.cpp

unassigned

rps_aux.cpp

unassigned

search_strategy.cpp

unassigned

setup_factory.cpp

ncbidiag.inl

unassigned

prelim_stage.cpp

unassigned

traceback_stage.cpp

unassigned

uniform_search.cpp

unassigned

local_search.cpp

unassigned

blast_results.cpp

unassigned

remote_search.cpp

unassigned

query_data.cpp

unassigned

objmgr_query_data.cpp

unassigned

objmgrfree_query_data.cpp

typeinfo.inl

objectinfo.inl

memberid.inl

item.inl

unassigned

bioseq_extract_data_priv.cpp

typeinfo.inl

objectinfo.inl

memberid.inl

item.inl

unassigned

effsearchspace_calc.cpp

unassigned

blast_seqinfosrc_aux.cpp

unassigned

blast_dbindex.cpp

ncbidiag.inl

ncbimtx.inl

unassigned

split_query_cxx.cpp

unassigned

split_query_aux_priv.cpp

unassigned

split_query_blk.cpp

ncbidiag.inl

unassigned

winmask_filter.cpp

ncbidiag.inl

subj_ranges_set.cpp

unassigned

rpsblast_local.cpp

unassigned

seedtop.cpp

unassigned

cdd_pssm_input.cpp

unassigned

deltablast_options.cpp

unassigned

deltablast.cpp

libraries


manual

libsubmit.so

compile units

includes

Contact_info.cpp

Seq_submit.cpp

Submit_block.cpp

unassigned

Submit_block_.cpp

Seq_submit_.cpp

typeref.inl

typeinfo.inl

continfo.inl

Contact_info_.cpp

NCBI_Submit_module.cpp

classinfo.inl

libraries


manual

libmedline.so

compile units

includes

DocRef.cpp

Medline_entry.cpp

Medline_field.cpp

Medline_mesh.cpp

Medline_qual.cpp

Medline_rn.cpp

Medline_si.cpp

DocRef_.cpp

Medline_si_.cpp

Medline_rn_.cpp

Medline_qual_.cpp

typeref.inl

typeinfo.inl

continfo.inl

Medline_entry_.cpp

Medline_field_.cpp

Medline_mesh_.cpp

NCBI_Medline_module.cpp

classinfo.inl

libraries


manual

datatool

compile units

includes

unassigned

datatool.cpp

typeref.inl

objostrxml.inl

objectinfo.inl

ncbidiag.inl

unassigned

type.cpp

typeref.inl

ncbidiag.inl

typeinfo.inl

unassigned

namespace.cpp

unassigned

statictype.cpp

typeref.inl

enumtype.cpp

unassigned

reftype.cpp

typeref.inl

unassigned

unitype.cpp

typeref.inl

continfo.inl

typeinfo.inl

unassigned

blocktype.cpp

typeinfo.inl

typeref.inl

unassigned

choicetype.cpp

typeref.inl

item.inl

variant.inl

unassigned

typestr.cpp

ptrstr.cpp

unassigned

stdstr.cpp

unassigned

classstr.cpp

enumstr.cpp

stlstr.cpp

unassigned

choicestr.cpp

ncbidiag.inl

unassigned

choiceptrstr.cpp

value.cpp

ncbidiag.inl

mcontainer.cpp

unassigned

module.cpp

typeref.inl

ncbidiag.inl

unassigned

moduleset.cpp

ncbidiag.inl

unassigned

generate.cpp

ncbidiag.inl

unassigned

filecode.cpp

ncbidiag.inl

code.cpp

unassigned

fileutil.cpp

ncbidiag.inl

unassigned

alexer.cpp

ncbidiag.inl

unassigned

aparser.cpp

unassigned

parser.cpp

ncbidiag.inl

lexer.cpp

unassigned

exceptions.cpp

unassigned

comments.cpp

unassigned

srcutil.cpp

unassigned

dtdaux.cpp

dtdlexer.cpp

dtdparser.cpp

ncbidiag.inl

unassigned

rpcgen.cpp

ncbidiag.inl

unassigned

aliasstr.cpp

xsdlexer.cpp

xsdparser.cpp

ncbidiag.inl

wsdllexer.cpp

unassigned

wsdlparser.cpp

ncbidiag.inl

wsdlstr.cpp

unassigned

traversal_pattern_match_callback.cpp

ncbidiag.inl

unassigned

traversal_code_generator.cpp

unassigned

traversal_merger.cpp

unassigned

traversal_node.cpp

unassigned

traversal_spec_file_parser.cpp

libraries


manual

libxobjmgr.so

compile units

includes

unassigned

seq_table_setters.cpp

objectinfo.inl

stdtypes.inl

typeinfo.inl

typeref.inl

item.inl

memberlist.inl

classinfob.inl

classinfo.inl

choice.inl

unassigned

seq_table_info.cpp

ncbidiag.inl

unassigned

seq_annot_info.cpp

ncbimtx.inl

ncbidiag.inl

unassigned

table_field.cpp

unassigned

seq_map_switch.cpp

unassigned

snp_annot_info.cpp

unassigned

annot_types_ci.cpp

unassigned

seq_loc_cvt.cpp

unassigned

annot_selector.cpp

unassigned

seq_descr_ci.cpp

unassigned

feat_ci.cpp

graph_ci.cpp

unassigned

ncbidiag.inl

annot_object.cpp

unassigned

annot_object_index.cpp

unassigned

annot_ci.cpp

unassigned

tse_info.cpp

ncbimtx.inl

ncbidiag.inl

tse_info_object.cpp

ncbidiag.inl

unassigned

seq_entry_info.cpp

bioseq_base_info.cpp

bioseq_set_info.cpp

bioseq_info.cpp

ncbimtx.inl

unassigned

ncbimtx.inl

data_source.cpp

ncbidiag.inl

unassigned

priority.cpp

typeinfo.inl

unassigned

prefetch_impl.cpp

ncbimtx.inl

ncbidiag.inl

unassigned

prefetch_manager.cpp

ncbimtx.inl

ncbidiag.inl

prefetch_manager_impl.cpp

ncbidiag.inl

ncbimtx.inl

unassigned

prefetch_actions.cpp

ncbidiag.inl

scope.cpp

unassigned

heap_scope.cpp

unassigned

scope_impl.cpp

ncbidiag.inl

ncbimtx.inl

unassigned

scope_info.cpp

ncbimtx.inl

unassigned

tse_handle.cpp

unassigned

seq_map.cpp

ncbimtx.inl

ncbidiag.inl

unassigned

seq_map_ci.cpp

unassigned

seq_entry_ci.cpp

unassigned

seq_annot_ci.cpp

seq_table_ci.cpp

unassigned

seq_entry_handle.cpp

unassigned

bioseq_set_handle.cpp

unassigned

bioseq_handle.cpp

unassigned

seq_annot_handle.cpp

align_ci.cpp

unassigned

data_loader.cpp

handle_range.cpp

unassigned

objmgr_exception.cpp

unassigned

handle_range_map.cpp

unassigned

ncbidiag.inl

object_manager.cpp

ncbimtx.inl

unassigned

seq_vector.cpp

unassigned

seq_vector_ci.cpp

unassigned

seqdesc_ci.cpp

unassigned

tse_split_info.cpp

ncbimtx.inl

ncbidiag.inl

unassigned

tse_chunk_info.cpp

ncbimtx.inl

unassigned

bioseq_ci.cpp

unassigned

annot_type_index.cpp

unassigned

seq_loc_mapper.cpp

unassigned

seq_align_mapper.cpp

unassigned

annot_collector.cpp

ncbidiag.inl

ncbimtx.inl

unassigned

data_loader_factory.cpp

mapped_feat.cpp

unassigned

seq_feat_handle.cpp

unassigned

seq_graph_handle.cpp

unassigned

seq_align_handle.cpp

unassigned

tse_assigner.cpp

ncbimtx.inl

unassigned

ncbidiag.inl

scope_transaction.cpp

scope_transaction_impl.cpp

ncbidiag.inl

unassigned

edit_commands_impl.cpp

bioseq_edit_commands.cpp

seq_entry_edit_commands.cpp

unassigned

bioseq_set_edit_commands.cpp

unassigned

edit_saver.cpp

unassigned

unsupp_editsaver.cpp

unassigned

edits_db_engine.cpp

edits_db_saver.cpp

unassigned

annot_finder.cpp

ncbimtx.inl

libraries


manual

libblast.so

compile units

includes

aa_ungapped.c

blast_diagnostics.c

blast_engine.c

blast_extend.c

blast_filter.c

blast_gapalign.c

blast_hits.c

blast_hspstream.c

blast_itree.c

blast_kappa.c

blast_lookup.c

blast_aalookup.c

blast_aascan.c

masksubj.inl

blast_nalookup.c

blast_nascan.c

blast_message.c

blast_options.c

blast_psi.c

na_ungapped.c

masksubj.inl

blast_psi_priv.c

blast_seg.c

blast_seqsrc.c

blast_setup.c

blast_stat.c

blast_traceback.c

blast_util.c

gapinfo.c

greedy_align.c

hspfilter_collector.c

hspfilter_besthit.c

hspfilter_culling.c

link_hsps.c

lookup_util.c

lookup_wrap.c

matrix_freq_ratios.c

ncbi_std.c

ncbi_math.c

ncbi_erf.c

unassigned

blast_encoding.c

pattern.c

phi_extend.c

phi_gapalign.c

phi_lookup.c

blast_parameters.c

blast_posit.c

blast_program.c

blast_query_info.c

blast_tune.c

blast_sw.c

blast_dynarray.c

split_query.c

gencode_singleton.c

index_ungapped.c

blast_traceback_mt_priv.c

blast_hspstream_mt_utils.c

libraries


manual

libseqedit.so

compile units

includes

SeqEdit_Cmd.cpp

SeqEdit_Cmd_AddAnnot.cpp

SeqEdit_Cmd_AddDesc.cpp

SeqEdit_Cmd_AddDescr.cpp

SeqEdit_Cmd_AddId.cpp

SeqEdit_Cmd_AttachAnnot.cpp

SeqEdit_Cmd_AttachSeq.cpp

SeqEdit_Cmd_AttachSeqEntry.cpp

SeqEdit_Cmd_AttachSet.cpp

SeqEdit_Cmd_ChangeSeqAttr.cpp

SeqEdit_Cmd_ChangeSetAttr.cpp

SeqEdit_Cmd_RemoveAnnot.cpp

SeqEdit_Cmd_RemoveDesc.cpp

SeqEdit_Cmd_RemoveId.cpp

SeqEdit_Cmd_RemoveSeqEntry.cpp

SeqEdit_Cmd_ReplaceAnnot.cpp

SeqEdit_Cmd_ResetDescr.cpp

SeqEdit_Cmd_ResetIds.cpp

SeqEdit_Cmd_ResetSeqAttr.cpp

SeqEdit_Cmd_ResetSeqEntry.cpp

SeqEdit_Cmd_ResetSetAttr.cpp

SeqEdit_Cmd_SetDescr.cpp

SeqEdit_Id.cpp

SeqEdit_Cmd_.cpp

SeqEdit_Id_.cpp

SeqEdit_Cmd_SetDescr_.cpp

SeqEdit_Cmd_ResetSetAttr_.cpp

SeqEdit_Cmd_ResetSeqEntry_.cpp

SeqEdit_Cmd_ResetSeqAttr_.cpp

SeqEdit_Cmd_ResetDescr_.cpp

SeqEdit_Cmd_ReplaceAnnot_.cpp

SeqEdit_Cmd_RemoveSeqEntry_.cpp

SeqEdit_Cmd_RemoveId_.cpp

SeqEdit_Cmd_RemoveDesc_.cpp

SeqEdit_Cmd_ChangeSetAttr_.cpp

SeqEdit_Cmd_ChangeSeqAttr_.cpp

SeqEdit_Cmd_AttachSet_.cpp

SeqEdit_Cmd_AttachSeqEntry_.cpp

SeqEdit_Cmd_AttachSeq_.cpp

SeqEdit_Cmd_AttachAnnot_.cpp

SeqEdit_Cmd_AddId_.cpp

SeqEdit_Cmd_AddDescr_.cpp

SeqEdit_Cmd_AddDesc_.cpp

SeqEdit_Cmd_RemoveAnnot_.cpp

SeqEdit_Cmd_AddAnnot_.cpp

typeref.inl

typeinfo.inl

continfo.inl

SeqEdit_Cmd_ResetIds_.cpp

NCBI_SeqEdit_module.cpp

classinfo.inl

libraries


manual

libxregexp.so

compile units

includes

unassigned

regexp.cpp

unassigned

arg_regexp.cpp

unassigned

mask_regexp.cpp

libraries


manual

libxalgoblastdbindex.so

compile units

includes

unassigned

sequence_istream_fasta.cpp

unassigned

sequence_istream_bdb.cpp

unassigned

dbindex.cpp

ncbidiag.inl

unassigned

dbindex_factory.cpp

unassigned

dbindex_search.cpp

ncbidiag.inl

libraries


manual

libseqset.so

compile units

includes

unassigned

Seq_entry.cpp

Bioseq_set.cpp

typeinfo.inl

objectinfo.inl

memberid.inl

item.inl

Seq_entry_.cpp

typeref.inl

typeinfo.inl

continfo.inl

Bioseq_set_.cpp

NCBI_Seqset_module.cpp

classinfo.inl

unassigned

gb_release_file.cpp

objectiter.inl

typeref.inl

objectinfo.inl

item.inl

objistr.inl

memberlist.inl

classinfob.inl

classinfo.inl

objectio.inl

libraries


manual

libseq.so

compile units

includes

unassigned

Bioseq.cpp

Delta_ext.cpp

Align_def.cpp

Annot_descr.cpp

Annot_id.cpp

Annotdesc.cpp

Delta_seq.cpp

Linkage_evidence.cpp

Map_ext.cpp

MolInfo.cpp

Num_cont.cpp

Num_enum.cpp

Num_real.cpp

Num_ref.cpp

Numbering.cpp

Pubdesc.cpp

Seg_ext.cpp

Seq_annot.cpp

Seq_data.cpp

Seq_descr.cpp

Seq_ext.cpp

Seq_gap.cpp

Seq_hist.cpp

Seq_hist_rec.cpp

Seq_inst.cpp

Seq_literal.cpp

Seqdesc.cpp

Textannot_id.cpp

ncbidiag.inl

unassigned

Seq_align.cpp

Dense_diag.cpp

Dense_seg.cpp

Packed_seg.cpp

Product_pos.cpp

Prot_pos.cpp

Score.cpp

objectinfo.inl

Score_set.cpp

Seq_align_set.cpp

Sparse_align.cpp

Sparse_seg.cpp

Sparse_seg_ext.cpp

Splice_site.cpp

Spliced_exon.cpp

Spliced_exon_chunk.cpp

Spliced_seg.cpp

Spliced_seg_modifier.cpp

Std_seg.cpp

ncbidiag.inl

objectiter.inl

typeinfo.inl

classinfob.inl

EMBL_block.cpp

EMBL_dbname.cpp

EMBL_xref.cpp

GB_block.cpp

PDB_block.cpp

PDB_replace.cpp

PIR_block.cpp

PRF_ExtraSrc.cpp

PRF_block.cpp

SP_block.cpp

unassigned

BinomialOrgName.cpp

BioSource.cpp

Cdregion.cpp

Clone_ref.cpp

Clone_seq.cpp

Clone_seq_set.cpp

Code_break.cpp

Delta_item.cpp

EvidenceBasis.cpp

ExperimentSupport.cpp

Ext_loc.cpp

Feat_id.cpp

Gb_qual.cpp

Gene_nomenclature.cpp

Gene_ref.cpp

Genetic_code.cpp

Genetic_code_table.cpp

Imp_feat.cpp

InferenceSupport.cpp

ModelEvidenceItem.cpp

ModelEvidenceSupport.cpp

MultiOrgName.cpp

OrgMod.cpp

OrgName.cpp

Org_ref.cpp

PCRPrimer.cpp

PCRPrimerSet.cpp

PCRReaction.cpp

PCRReactionSet.cpp

PartialOrgName.cpp

Phenotype.cpp

Population_data.cpp

Program_id.cpp

Prot_ref.cpp

Seq_feat.cpp

RNA_gen.cpp

RNA_qual.cpp

RNA_qual_set.cpp

RNA_ref.cpp

Rsite_ref.cpp

SeqFeatData.cpp

SeqFeatSupport.cpp

SeqFeatXref.cpp

SubSource.cpp

TaxElement.cpp

Trna_ext.cpp

Tx_evidence.cpp

Txinit.cpp

VariantProperties.cpp

Variation_inst.cpp

Variation_ref.cpp

ncbidiag.inl

objistr.inl

institution_codes.inc

ecnum_ambiguous.inc

ecnum_deleted.inc

ecnum_replaced.inc

ecnum_specific.inc

unassigned

Seq_loc.cpp

Giimport_id.cpp

PDB_seq_id.cpp

Packed_seqint.cpp

Packed_seqpnt.cpp

Patent_seq_id.cpp

Seq_bond.cpp

Seq_id.cpp

Seq_id_set.cpp

Seq_interval.cpp

Seq_point.cpp

Seq_loc_equiv.cpp

Seq_loc_mix.cpp

Textseq_id.cpp

ncbidiag.inl

accguide.inc

Byte_graph.cpp

Int_graph.cpp

Real_graph.cpp

Seq_graph.cpp

objectiter.inl

unassigned

CommonBytes_table.cpp

CommonString_table.cpp

Scaled_int_multi_data.cpp

Scaled_real_multi_data.cpp

SeqTable_column.cpp

SeqTable_column_info.cpp

SeqTable_single_data.cpp

Seq_table.cpp

SeqTable_sparse_index.cpp

SeqTable_multi_data.cpp

objectinfo.inl

objectiter.inl

Annot_id_.cpp

Annotdesc_.cpp

Delta_seq_.cpp

Linkage_evidence_.cpp

Num_cont_.cpp

Numbering_.cpp

Seq_data_.cpp

Seq_ext_.cpp

Seqdesc_.cpp

typeref.inl

continfo.inl

typeinfo.inl

Seq_literal_.cpp

Seq_inst_.cpp

Num_ref_.cpp

Textannot_id_.cpp

Pubdesc_.cpp

Num_real_.cpp

MolInfo_.cpp

Align_def_.cpp

Annot_descr_.cpp

Bioseq_.cpp

Delta_ext_.cpp

Map_ext_.cpp

Num_enum_.cpp

Seg_ext_.cpp

Seq_annot_.cpp

Seq_descr_.cpp

Seq_gap_.cpp

Seq_hist_.cpp

Seq_hist_rec_.cpp

Ref_ext_.cpp

NCBIstdaa_.cpp

NCBIpna_.cpp

NCBIpaa_.cpp

NCBIeaa_.cpp

NCBI8na_.cpp

NCBI8aa_.cpp

NCBI4na_.cpp

NCBI2na_.cpp

IUPACna_.cpp

IUPACaa_.cpp

Heterogen_.cpp

GIBB_mol_.cpp

GIBB_mod_.cpp

GIBB_method_.cpp

NCBI_Sequence_module.cpp

classinfo.inl

Product_pos_.cpp

Prot_pos_.cpp

Sparse_seg_ext_.cpp

Spliced_exon_chunk_.cpp

Spliced_seg_modifier_.cpp

Std_seg_.cpp

Sparse_seg_.cpp

Sparse_align_.cpp

Packed_seg_.cpp

Dense_seg_.cpp

Dense_diag_.cpp

Score_.cpp

Splice_site_.cpp

typeref.inl

typeinfo.inl

continfo.inl

Score_set_.cpp

Seq_align_.cpp

Seq_align_set_.cpp

Spliced_exon_.cpp

Spliced_seg_.cpp

NCBI_Seqalign_module.cpp

classinfo.inl

EMBL_dbname_.cpp

PRF_ExtraSrc_.cpp

typeref.inl

typeinfo.inl

continfo.inl

EMBL_block_.cpp

EMBL_xref_.cpp

GB_block_.cpp

PDB_block_.cpp

PDB_replace_.cpp

PIR_block_.cpp

PRF_block_.cpp

SP_block_.cpp

SP_General_module.cpp

PRF_General_module.cpp

PIR_General_module.cpp

PDB_General_module.cpp

GenBank_General_module.cpp

EMBL_General_module.cpp

classinfo.inl

Feat_id_.cpp

Rsite_ref_.cpp

SeqFeatData_.cpp

Tx_evidence_.cpp

Variation_ref_.cpp

TaxElement_.cpp

SubSource_.cpp

RNA_qual_.cpp

Program_id_.cpp

PCRPrimer_.cpp

OrgMod_.cpp

Imp_feat_.cpp

Gb_qual_.cpp

BinomialOrgName_.cpp

VariantProperties_.cpp

Trna_ext_.cpp

SeqFeatXref_.cpp

RNA_ref_.cpp

RNA_gen_.cpp

PCRReaction_.cpp

ModelEvidenceItem_.cpp

Gene_nomenclature_.cpp

Ext_loc_.cpp

Delta_item_.cpp

Code_break_.cpp

Clone_seq_.cpp

Clone_ref_.cpp

typeref.inl

continfo.inl

typeinfo.inl

BioSource_.cpp

Cdregion_.cpp

Clone_seq_set_.cpp

EvidenceBasis_.cpp

ExperimentSupport_.cpp

Gene_ref_.cpp

Genetic_code_.cpp

Genetic_code_table_.cpp

InferenceSupport_.cpp

ModelEvidenceSupport_.cpp

MultiOrgName_.cpp

OrgName_.cpp

Org_ref_.cpp

PCRPrimerSet_.cpp

PCRReactionSet_.cpp

PartialOrgName_.cpp

Phenotype_.cpp

Population_data_.cpp

Prot_ref_.cpp

RNA_qual_set_.cpp

SeqFeatSupport_.cpp

Seq_feat_.cpp

Txinit_.cpp

Variation_inst_.cpp

NCBI_TxInit_module.cpp

NCBI_Rsite_module.cpp

NCBI_RNA_module.cpp

NCBI_Protein_module.cpp

PCRPrimerSeq_.cpp

PCRPrimerName_.cpp

NCBI_Gene_module.cpp

EvidenceCategory_.cpp

NCBI_Variation_module.cpp

NCBI_Seqfeat_module.cpp

NCBI_BioSource_module.cpp

NCBI_Organism_module.cpp

classinfo.inl

Seq_id_.cpp

Seq_loc_.cpp

Textseq_id_.cpp

Giimport_id_.cpp

Seq_point_.cpp

Seq_interval_.cpp

Seq_bond_.cpp

Patent_seq_id_.cpp

Packed_seqpnt_.cpp

PDB_seq_id_.cpp

typeref.inl

typeinfo.inl

continfo.inl

Packed_seqint_.cpp

Seq_id_set_.cpp

Seq_loc_equiv_.cpp

Seq_loc_mix_.cpp

PDB_mol_id_.cpp

Na_strand_.cpp

NCBI_Seqloc_module.cpp

classinfo.inl

unassigned

Real_graph_.cpp

Int_graph_.cpp

Byte_graph_.cpp

Seq_graph_.cpp

NCBI_Seqres_module.cpp

typeref.inl

typeinfo.inl

continfo.inl

classinfo.inl

SeqTable_multi_data_.cpp

SeqTable_single_data_.cpp

SeqTable_sparse_index_.cpp

CommonBytes_table_.cpp

SeqTable_column_info_.cpp

CommonString_table_.cpp

Seq_table_.cpp

SeqTable_column_.cpp

Scaled_real_multi_data_.cpp

Scaled_int_multi_data_.cpp

NCBI_SeqTable_module.cpp

typeref.inl

typeinfo.inl

continfo.inl

classinfo.inl

unassigned

seqport_util.cpp

unassigned

seq_id_tree.cpp

ncbidiag.inl

ncbimtx.inl

unassigned

seq_id_handle.cpp

unassigned

seq_id_mapper.cpp

ncbimtx.inl

unassigned

seq_loc_mapper_base.cpp

ncbidiag.inl

unassigned

ncbidiag.inl

seq_align_mapper_base.cpp

unassigned

seqlocinfo.cpp

unassigned

sofa_map.cpp

seq_loc_from_string.cpp

seq_loc_reverse_complementer.cpp

libraries


manual

libgene_info.so

compile units

includes

unassigned

gene_info.cpp

unassigned

gene_info_reader.cpp

unassigned

file_utils.cpp

libraries


manual

libxncbi.so

compile units

includes

ncbidiag.inl

ncbi_os_unix.cpp

unassigned

blob_storage.cpp

ncbidiag.inl

ncbimtx.inl

unassigned

ddumpable.cpp

unassigned

env_reg.cpp

ncbidiag.inl

unassigned

metareg.cpp

ncbimtx.inl

unassigned

ncbidiag.inl

ncbi_config.cpp

unassigned

ncbi_param.cpp

unassigned

ncbi_process.cpp

ncbidiag.inl

ncbi_safe_static.cpp

ncbidiag.inl

ncbi_signal.cpp

unassigned

ncbi_stack_linux.cpp

ncbi_stack.cpp

ncbi_system.cpp

ncbidiag.inl

unassigned

ncbiapp.cpp

ncbidiag.inl

ncbimtx.inl

unassigned

ncbiargs.cpp

ncbidiag.inl

ncbimtx.inl

libraries


manual

libbiblio.so

compile units

includes

Id_pat.cpp

Affil.cpp

ArticleId.cpp

ArticleIdSet.cpp

Auth_list.cpp

Author.cpp

CitRetract.cpp

Cit_art.cpp

Cit_jour.cpp

Cit_proc.cpp

Cit_book.cpp

Cit_gen.cpp

Cit_let.cpp

Cit_pat.cpp

Cit_sub.cpp

Imprint.cpp

Meeting.cpp

Patent_priority.cpp

PubStatusDate.cpp

PubStatusDateSet.cpp

Title.cpp

Affil_.cpp

ArticleId_.cpp

CitRetract_.cpp

PubStatusDate_.cpp

Patent_priority_.cpp

Meeting_.cpp

Id_pat_.cpp

Cit_sub_.cpp

Cit_proc_.cpp

Cit_let_.cpp

Cit_jour_.cpp

Cit_book_.cpp

Cit_art_.cpp

Author_.cpp

Auth_list_.cpp

typeref.inl

typeinfo.inl

continfo.inl

Imprint_.cpp

Cit_gen_.cpp

ArticleIdSet_.cpp

Cit_pat_.cpp

PubStatusDateSet_.cpp

Title_.cpp

PubStatus_.cpp

PubMedId_.cpp

PmcPid_.cpp

PmcID_.cpp

PmPid_.cpp

PII_.cpp

MedlineUID_.cpp

DOI_.cpp

NCBI_Biblio_module.cpp

classinfo.inl

citation_base.cpp

ncbidiag.inl

libraries


manual