rate4site - armel

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rate4site

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includes

start.S

init.c

crti.S

unassigned

rate4siteOptions.cpp

ostream

fstream

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

istream

streambuf

cstdio

iosfwd

vector.tcc

basic_ios.tcc

fstream.tcc

unassigned

typeinfo

fstream

rate4site.cpp

ostream

streambuf

iomanip

vector.tcc

istream

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

cstdlib

iosfwd

cstdio

ctime

basic_ios.tcc

fstream.tcc

new

unassigned

sequenceContainer.cpp

ostream

vector.tcc

basic_string.tcc

iostream

cwchar

clocale

cwctype

ostream.tcc

iosfwd

cstdio

new

unassigned

sequence.cpp

vector.tcc

basic_string.tcc

iostream

new

cwchar

clocale

cwctype

iosfwd

cstdio

cstdlib

unassigned

mulAlphabet.cpp

ostream

iostream

cwchar

clocale

basic_string.tcc

vector.tcc

cwctype

ostream.tcc

cstdio

iosfwd

new

unassigned

someUtil.cpp

cmath

ostream

istream

fstream

streambuf

basic_string.tcc

vector.tcc

iostream

cwchar

new

clocale

cwctype

ostream.tcc

cstdio

iosfwd

ctime

cstdlib

basic_ios.tcc

fstream.tcc

unassigned

logFile.cpp

ostream

fstream

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

streambuf

cstdio

iosfwd

vector.tcc

basic_ios.tcc

fstream.tcc

new

pijAccelerator.cpp

cwchar

clocale

new

replacementModel.cpp

cwchar

clocale

new

distribution.cpp

iostream

cwchar

clocale

basic_string.tcc

vector.tcc

cwctype

iosfwd

new

unassigned

errorMsg.cpp

ostream

iostream

cwchar

clocale

basic_string.tcc

vector.tcc

cwctype

ostream.tcc

iosfwd

cstdio

unassigned

nucleotide.cpp

vector.tcc

iostream

cwchar

clocale

basic_string.tcc

cwctype

iosfwd

new

unassigned

amino.cpp

vector.tcc

ostream

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

new

unassigned

evaluateCharacterFreq.cpp

ostream

vector.tcc

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

new

unassigned

uniDistribution.cpp

iostream

cwchar

clocale

basic_string.tcc

vector.tcc

cwctype

iosfwd

new

unassigned

generalGammaDistribution.cpp

vector.tcc

iostream

cwchar

clocale

cwctype

iosfwd

cstdio

new

unassigned

readDatMatrix.cpp

ostream

vector.tcc

istream

fstream

streambuf

sstream

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

istream.tcc

cstdio

iosfwd

basic_ios.tcc

fstream.tcc

sstream.tcc

new

unassigned

datMatrixHolder.cpp

cwchar

clocale

basic_string.tcc

unassigned

chebyshevAccelerator.cpp

vector.tcc

cwchar

clocale

new

unassigned

gtrModel.cpp

vector.tcc

iostream

cwchar

clocale

basic_string.tcc

cwctype

cstdio

iosfwd

new

unassigned

fromQtoPt.cpp

vector.tcc

iostream

cwchar

clocale

basic_string.tcc

cwctype

iosfwd

cstdio

new

unassigned

vector.tcc

distanceTable.cpp

iostream

cwchar

clocale

basic_string.tcc

cwctype

iosfwd

cstdio

new

unassigned

nj.cpp

ostream

vector.tcc

iostream

new

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

cstdlib

unassigned

njConstrain.cpp

ostream

vector.tcc

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

new

unassigned

numRec.cpp

ostream

cmath

vector.tcc

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

cstdlib

new

unassigned

stochasticProcess.cpp

iostream

cwchar

clocale

cwctype

new

unassigned

typeinfo

likeDist.cpp

ostream

vector.tcc

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

new

unassigned

countTableComponent.cpp

ostream

vector.tcc

iostream

cwchar

clocale

cwctype

ostream.tcc

iosfwd

cstdio

new

unassigned

typeinfo

vector.tcc

fastStartTree.cpp

ostream

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

cstdlib

new

unassigned

vector.tcc

ostream

bestAlpha.cpp

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

new

unassigned

gammaDistribution.cpp

iostream

cwchar

clocale

basic_string.tcc

vector.tcc

cwctype

iosfwd

cstdio

new

unassigned

siteSpecificRate.cpp

ostream

vector.tcc

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

new

unassigned

likelihoodComputation.cpp

ostream

vector.tcc

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

new

unassigned

vector.tcc

recognizeFormat.cpp

iostream

cwchar

clocale

basic_string.tcc

cwctype

istream

iosfwd

cstdio

new

unassigned

bblEM.cpp

vector.tcc

ostream

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

ctime

new

unassigned

hky.cpp

vector.tcc

iostream

cwchar

clocale

basic_string.tcc

cwctype

iosfwd

new

unassigned

vector.tcc

basic_string.tcc

ostream

bestGtrModelParams.cpp

iostream

cwchar

clocale

cwctype

ostream.tcc

iosfwd

cstdio

new

unassigned

tamura92.cpp

vector.tcc

iostream

cwchar

clocale

cwctype

new

unassigned

vector.tcc

ostream

bestHKYparam.cpp

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

new

unassigned

vector.tcc

ostream

bestTamura92param.cpp

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

new

talRandom.cpp

iostream

cwchar

clocale

cwctype

cstdio

iosfwd

ctime

unassigned

typeinfo

fromCountTableComponentToDistance.cpp

iostream

cwchar

clocale

basic_string.tcc

vector.tcc

cwctype

iosfwd

cstdio

new

unassigned

computeCounts.cpp

vector.tcc

iostream

cwchar

clocale

basic_string.tcc

cwctype

iosfwd

cstdio

new

unassigned

vector.tcc

computeDownAlg.cpp

iostream

cwchar

clocale

basic_string.tcc

cwctype

iosfwd

cstdio

new

unassigned

vector.tcc

computeUpAlg.cpp

ostream

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

new

unassigned

gammaUtilities.cpp

ostream

iostream

cwchar

clocale

basic_string.tcc

vector.tcc

cwctype

ostream.tcc

iosfwd

cstdio

unassigned

seqContainerTreeMap.cpp

vector.tcc

ostream

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

new

unassigned

treeUtil.cpp

ostream

vector.tcc

istream

fstream

streambuf

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

cstdlib

basic_ios.tcc

fstream.tcc

new

unassigned

multipleStochasticProcess.cpp

vector.tcc

iostream

cwchar

clocale

basic_string.tcc

cwctype

iosfwd

new

unassigned

tree.cpp

ostream

iomanip

basic_string.tcc

vector.tcc

fstream

streambuf

istream

iostream

new

cwchar

clocale

cwctype

ostream.tcc

iosfwd

cstdio

cstdlib

ctime

basic_ios.tcc

fstream.tcc

unassigned

bblEMProportionalEB.cpp

vector.tcc

ostream

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

ctime

new

unassigned

fromCountTableComponentToDistancePropEB.cpp

iostream

cwchar

clocale

vector.tcc

cwctype

iosfwd

cstdio

new

unassigned

ostream

likeDistPropEB.cpp

iostream

cwchar

clocale

basic_string.tcc

vector.tcc

cwctype

ostream.tcc

iosfwd

cstdio

unassigned

vector.tcc

ostream

bblLSProportionalEB.cpp

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

new

unassigned

phylipFormat.cpp

ostream

vector.tcc

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

new

unassigned

maseFormat.cpp

ostream

vector.tcc

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

new

unassigned

clustalFormat.cpp

ostream

vector.tcc

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

new

unassigned

fastaFormat.cpp

ostream

iostream

cwchar

clocale

basic_string.tcc

vector.tcc

cwctype

ostream.tcc

iosfwd

cstdio

cstdlib

new

unassigned

phylipSequentialFormat.cpp

ostream

iostream

cwchar

clocale

basic_string.tcc

vector.tcc

cwctype

ostream.tcc

iosfwd

cstdio

new

unassigned

molphyFormat.cpp

ostream

iostream

cwchar

clocale

basic_string.tcc

vector.tcc

cwctype

ostream.tcc

iosfwd

cstdio

new

getRandomWeights.cpp

iostream

cwchar

clocale

vector.tcc

cwctype

cstdio

iosfwd

ctime

unassigned

nexusFormat.cpp

ostream

vector.tcc

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

new

alphabet.cpp

cwchar

clocale

basic_string.tcc

new

unassigned

readTree.cpp

ostream

vector.tcc

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

istream

iosfwd

cstdio

new

unassigned

vector.tcc

computePijComponent.cpp

iostream

cwchar

clocale

basic_string.tcc

cwctype

iosfwd

cstdio

new

unassigned

unObservableData.cpp

vector.tcc

iostream

cwchar

clocale

basic_string.tcc

cwctype

iosfwd

cstdio

new

unassigned

likelihoodComputationGL.cpp

vector.tcc

ostream

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

new

elf-init.c

crtn.S

libraries


manual

rate4site_doublerep

compile units

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includes

start.S

init.c

crti.S

unassigned

rate4siteOptions.cpp

ostream

fstream

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

istream

streambuf

cstdio

iosfwd

vector.tcc

basic_ios.tcc

fstream.tcc

unassigned

typeinfo

fstream

rate4site.cpp

ostream

streambuf

iomanip

vector.tcc

istream

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

cstdio

iosfwd

ctime

basic_ios.tcc

fstream.tcc

new

unassigned

sequenceContainer.cpp

ostream

vector.tcc

basic_string.tcc

iostream

cwchar

clocale

cwctype

ostream.tcc

iosfwd

cstdio

new

unassigned

sequence.cpp

vector.tcc

basic_string.tcc

iostream

new

cwchar

clocale

cwctype

iosfwd

cstdio

cstdlib

unassigned

mulAlphabet.cpp

ostream

iostream

cwchar

clocale

basic_string.tcc

vector.tcc

cwctype

ostream.tcc

cstdio

iosfwd

new

unassigned

someUtil.cpp

cmath

ostream

istream

fstream

streambuf

basic_string.tcc

vector.tcc

iostream

cwchar

new

clocale

cwctype

ostream.tcc

cstdio

iosfwd

ctime

cstdlib

basic_ios.tcc

fstream.tcc

unassigned

logFile.cpp

ostream

fstream

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

streambuf

cstdio

iosfwd

vector.tcc

basic_ios.tcc

fstream.tcc

new

pijAccelerator.cpp

cwchar

clocale

new

replacementModel.cpp

cwchar

clocale

new

distribution.cpp

iostream

cwchar

clocale

basic_string.tcc

vector.tcc

cwctype

iosfwd

new

unassigned

errorMsg.cpp

ostream

iostream

cwchar

clocale

basic_string.tcc

vector.tcc

cwctype

ostream.tcc

iosfwd

cstdio

unassigned

nucleotide.cpp

vector.tcc

iostream

cwchar

clocale

basic_string.tcc

cwctype

iosfwd

new

unassigned

amino.cpp

vector.tcc

ostream

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

new

unassigned

evaluateCharacterFreq.cpp

ostream

vector.tcc

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

new

unassigned

uniDistribution.cpp

iostream

cwchar

clocale

basic_string.tcc

vector.tcc

cwctype

iosfwd

new

unassigned

generalGammaDistribution.cpp

vector.tcc

iostream

cwchar

clocale

cwctype

iosfwd

cstdio

new

unassigned

readDatMatrix.cpp

ostream

vector.tcc

istream

fstream

streambuf

sstream

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

istream.tcc

cstdio

iosfwd

basic_ios.tcc

fstream.tcc

sstream.tcc

new

unassigned

datMatrixHolder.cpp

cwchar

clocale

basic_string.tcc

unassigned

chebyshevAccelerator.cpp

vector.tcc

cwchar

clocale

new

unassigned

gtrModel.cpp

vector.tcc

iostream

cwchar

clocale

basic_string.tcc

cwctype

cstdio

iosfwd

new

unassigned

fromQtoPt.cpp

vector.tcc

iostream

cwchar

clocale

basic_string.tcc

cwctype

iosfwd

cstdio

new

unassigned

vector.tcc

distanceTable.cpp

iostream

cwchar

clocale

basic_string.tcc

cwctype

iosfwd

cstdio

new

unassigned

nj.cpp

ostream

vector.tcc

iostream

new

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

cstdlib

unassigned

njConstrain.cpp

ostream

vector.tcc

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

new

unassigned

numRec.cpp

ostream

cmath

vector.tcc

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

cstdlib

new

unassigned

stochasticProcess.cpp

iostream

cwchar

clocale

cwctype

new

unassigned

typeinfo

likeDist.cpp

ostream

vector.tcc

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

new

unassigned

countTableComponent.cpp

ostream

vector.tcc

iostream

cwchar

clocale

cwctype

ostream.tcc

iosfwd

cstdio

new

unassigned

typeinfo

vector.tcc

fastStartTree.cpp

ostream

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

cstdlib

new

unassigned

vector.tcc

ostream

bestAlpha.cpp

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

new

unassigned

gammaDistribution.cpp

iostream

cwchar

clocale

basic_string.tcc

vector.tcc

cwctype

iosfwd

cstdio

new

unassigned

siteSpecificRate.cpp

ostream

vector.tcc

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

new

unassigned

likelihoodComputation.cpp

ostream

vector.tcc

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

new

unassigned

vector.tcc

recognizeFormat.cpp

iostream

cwchar

clocale

basic_string.tcc

cwctype

istream

iosfwd

cstdio

new

unassigned

bblEM.cpp

vector.tcc

ostream

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

ctime

new

unassigned

hky.cpp

vector.tcc

iostream

cwchar

clocale

basic_string.tcc

cwctype

iosfwd

new

unassigned

vector.tcc

basic_string.tcc

ostream

bestGtrModelParams.cpp

iostream

cwchar

clocale

cwctype

ostream.tcc

iosfwd

cstdio

new

unassigned

tamura92.cpp

vector.tcc

iostream

cwchar

clocale

cwctype

new

unassigned

vector.tcc

ostream

bestHKYparam.cpp

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

new

unassigned

vector.tcc

ostream

bestTamura92param.cpp

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

new

talRandom.cpp

iostream

cwchar

clocale

cwctype

cstdio

iosfwd

ctime

unassigned

typeinfo

fromCountTableComponentToDistance.cpp

iostream

cwchar

clocale

basic_string.tcc

vector.tcc

cwctype

iosfwd

cstdio

new

unassigned

computeCounts.cpp

vector.tcc

iostream

cwchar

clocale

basic_string.tcc

cwctype

iosfwd

cstdio

new

unassigned

vector.tcc

computeDownAlg.cpp

iostream

cwchar

clocale

basic_string.tcc

cwctype

iosfwd

cstdio

new

unassigned

vector.tcc

computeUpAlg.cpp

ostream

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

new

unassigned

gammaUtilities.cpp

ostream

iostream

cwchar

clocale

basic_string.tcc

vector.tcc

cwctype

ostream.tcc

iosfwd

cstdio

unassigned

seqContainerTreeMap.cpp

vector.tcc

ostream

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

new

unassigned

treeUtil.cpp

ostream

vector.tcc

istream

fstream

streambuf

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

cstdlib

basic_ios.tcc

fstream.tcc

new

unassigned

multipleStochasticProcess.cpp

vector.tcc

iostream

cwchar

clocale

basic_string.tcc

cwctype

iosfwd

new

unassigned

tree.cpp

ostream

iomanip

basic_string.tcc

vector.tcc

fstream

streambuf

istream

iostream

new

cwchar

clocale

cwctype

ostream.tcc

iosfwd

cstdio

cstdlib

ctime

basic_ios.tcc

fstream.tcc

unassigned

bblEMProportionalEB.cpp

vector.tcc

ostream

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

ctime

new

unassigned

fromCountTableComponentToDistancePropEB.cpp

iostream

cwchar

clocale

vector.tcc

cwctype

iosfwd

cstdio

new

unassigned

ostream

likeDistPropEB.cpp

iostream

cwchar

clocale

basic_string.tcc

vector.tcc

cwctype

ostream.tcc

iosfwd

cstdio

unassigned

vector.tcc

ostream

bblLSProportionalEB.cpp

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

new

unassigned

phylipFormat.cpp

ostream

vector.tcc

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

new

unassigned

maseFormat.cpp

ostream

vector.tcc

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

new

unassigned

clustalFormat.cpp

ostream

vector.tcc

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

new

unassigned

fastaFormat.cpp

ostream

iostream

cwchar

clocale

basic_string.tcc

vector.tcc

cwctype

ostream.tcc

iosfwd

cstdio

cstdlib

new

unassigned

phylipSequentialFormat.cpp

ostream

iostream

cwchar

clocale

basic_string.tcc

vector.tcc

cwctype

ostream.tcc

iosfwd

cstdio

new

unassigned

molphyFormat.cpp

ostream

iostream

cwchar

clocale

basic_string.tcc

vector.tcc

cwctype

ostream.tcc

iosfwd

cstdio

new

getRandomWeights.cpp

iostream

cwchar

clocale

vector.tcc

cwctype

cstdio

iosfwd

ctime

unassigned

nexusFormat.cpp

ostream

vector.tcc

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

new

alphabet.cpp

cwchar

clocale

basic_string.tcc

new

unassigned

readTree.cpp

ostream

vector.tcc

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

istream

iosfwd

cstdio

new

unassigned

vector.tcc

computePijComponent.cpp

iostream

cwchar

clocale

basic_string.tcc

cwctype

iosfwd

cstdio

new

unassigned

unObservableData.cpp

vector.tcc

iostream

cwchar

clocale

basic_string.tcc

cwctype

iosfwd

cstdio

new

unassigned

likelihoodComputationGL.cpp

vector.tcc

ostream

iostream

cwchar

clocale

basic_string.tcc

cwctype

ostream.tcc

iosfwd

cstdio

new

elf-init.c

crtn.S

libraries


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