transtermhp - amd64
Documentation
./doc/changelog.Debian.gz
./doc/examples/mfold_rna.sh
./doc/examples/make_expterm.py.gz
./doc/examples/calibrate.sh
./doc/examples/random_fasta.py
./doc/copyright
./doc/RELEASE-NOTES.txt
./doc/README.Debian
./doc/USAGE.txt.gz
./doc/changelog.gz
Binaries
2ndscore
compile units
unassigned
seq.cc
Gimple
./seq.cc.004t.gimple
GKD
./seq.o.gkd
OBJ
obj: ./seq.o
unassigned
search.cc
Gimple
./search.cc.004t.gimple
GKD
./search.o.gkd
OBJ
obj: ./search.o
ermolaeva-score.cc
Gimple
./ermolaeva-score.cc.004t.gimple
GKD
./ermolaeva-score.o.gkd
OBJ
obj: ./ermolaeva-score.o
unassigned
util.cc
Gimple
./util.cc.004t.gimple
GKD
./util.o.gkd
OBJ
obj: ./util.o
unassigned
2ndscore.cc
Gimple
./2ndscore.cc.004t.gimple
GKD
./2ndscore.o.gkd
OBJ
obj: ./2ndscore.o
includes
unassigned
./seq.h
seq.cc
../headers//usr/include/c++/4.9/bits/basic_string.h
../headers//usr/include/c++/4.9/ext/atomicity.h
../headers//usr/include/c++/4.9/ostream
../headers//usr/include/c++/4.9/bits/stl_heap.h
../headers//usr/include/c++/4.9/bits/stl_iterator.h
../headers//usr/include/c++/4.9/bits/predefined_ops.h
../headers//usr/include/c++/4.9/bits/stl_algo.h
../headers//usr/include/c++/4.9/bits/stl_algobase.h
../headers//usr/include/c++/4.9/bits/list.tcc
../headers//usr/include/c++/4.9/bits/stl_list.h
../headers//usr/include/c++/4.9/ext/new_allocator.h
../headers//usr/include/c++/4.9/bits/move.h
../headers//usr/include/c++/4.9/bits/stl_vector.h
../headers//usr/include/c++/4.9/bits/char_traits.h
../headers//usr/include/x86_64-linux-gnu/bits/string3.h
../headers//usr/include/c++/4.9/bits/basic_string.tcc
../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h
../headers//usr/include/c++/4.9/iomanip
../headers//usr/include/c++/4.9/bits/ios_base.h
../headers//usr/include/c++/4.9/bits/stl_construct.h
../headers//usr/include/c++/4.9/bits/vector.tcc
../headers//usr/include/c++/4.9/bits/stl_uninitialized.h
../headers//usr/include/c++/4.9/cstdlib
../headers//usr/include/c++/4.9/iostream
../headers//usr/include/libio.h
../headers//usr/include/stdio.h
../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h
../headers//usr/include/wchar.h
../headers//usr/include/c++/4.9/cwchar
../headers//usr/include/c++/4.9/bits/cpp_type_traits.h
../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h
../headers//usr/include/c++/4.9/clocale
../headers//usr/include/c++/4.9/new
../headers//usr/include/c++/4.9/bits/allocator.h
../headers//usr/include/c++/4.9/bits/stringfwd.h
../headers//usr/include/c++/4.9/cwctype
../headers//usr/include/c++/4.9/bits/ostream.tcc
../headers//usr/include/c++/4.9/istream
../headers//usr/include/c++/4.9/bits/locale_facets.h
../headers//usr/include/c++/4.9/cstdio
../headers//usr/include/c++/4.9/cstring
../headers//usr/include/c++/4.9/bits/basic_ios.h
../headers//usr/include/c++/4.9/bits/postypes.h
../headers//usr/include/c++/4.9/iosfwd
../headers//usr/include/c++/4.9/bits/ostream_insert.h
../headers//usr/include/c++/4.9/bits/functexcept.h
../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h
../headers//usr/include/time.h
../headers//usr/include/c++/4.9/ext/numeric_traits.h
../headers//usr/include/c++/4.9/ext/alloc_traits.h
../headers//usr/include/c++/4.9/ext/type_traits.h
../headers//usr/include/c++/4.9/debug/debug.h
../headers//usr/include/locale.h
../headers//usr/include/x86_64-linux-gnu/bits/types.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h
../headers//usr/include/wctype.h
../headers//usr/include/stdlib.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h
./util.h
../headers//usr/include/_G_config.h
../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h
../headers//usr/include/x86_64-linux-gnu/bits/stdio.h
../headers//usr/include/string.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h
../headers//usr/include/assert.h
../headers//usr/include/ctype.h
unassigned
../headers//usr/include/c++/4.9/bits/locale_facets.h
./seq.h
./ermolaeva-score.h
../headers//usr/include/c++/4.9/bits/basic_string.h
../headers//usr/include/c++/4.9/ext/atomicity.h
../headers//usr/include/c++/4.9/bits/stl_algo.h
../headers//usr/include/c++/4.9/bits/stl_iterator.h
../headers//usr/include/c++/4.9/bits/stl_algobase.h
../headers//usr/include/c++/4.9/bits/predefined_ops.h
../headers//usr/include/c++/4.9/bits/list.tcc
../headers//usr/include/c++/4.9/ext/new_allocator.h
search.cc
../headers//usr/include/c++/4.9/bits/stl_list.h
../headers//usr/include/c++/4.9/ostream
../headers//usr/include/c++/4.9/bits/basic_ios.h
../headers//usr/include/c++/4.9/cstdlib
../headers//usr/include/c++/4.9/bits/vector.tcc
../headers//usr/include/c++/4.9/bits/stl_vector.h
../headers//usr/include/c++/4.9/bits/stl_uninitialized.h
../headers//usr/include/c++/4.9/bits/stl_construct.h
../headers//usr/include/c++/4.9/bits/stl_heap.h
../headers//usr/include/c++/4.9/bits/move.h
../headers//usr/include/c++/4.9/iostream
../headers//usr/include/libio.h
../headers//usr/include/stdio.h
../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h
../headers//usr/include/wchar.h
../headers//usr/include/c++/4.9/cwchar
../headers//usr/include/c++/4.9/bits/cpp_type_traits.h
../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h
../headers//usr/include/c++/4.9/bits/char_traits.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h
../headers//usr/include/c++/4.9/clocale
../headers//usr/include/c++/4.9/new
../headers//usr/include/c++/4.9/bits/allocator.h
../headers//usr/include/c++/4.9/bits/basic_string.tcc
../headers//usr/include/c++/4.9/bits/stringfwd.h
../headers//usr/include/c++/4.9/bits/ios_base.h
../headers//usr/include/c++/4.9/cwctype
../headers//usr/include/c++/4.9/bits/ostream.tcc
../headers//usr/include/c++/4.9/cstdio
../headers//usr/include/c++/4.9/cstring
../headers//usr/include/c++/4.9/iosfwd
../headers//usr/include/c++/4.9/bits/ostream_insert.h
../headers//usr/include/c++/4.9/bits/postypes.h
../headers//usr/include/c++/4.9/bits/functexcept.h
../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h
../headers//usr/include/time.h
../headers//usr/include/c++/4.9/ext/numeric_traits.h
../headers//usr/include/c++/4.9/ext/alloc_traits.h
../headers//usr/include/c++/4.9/debug/debug.h
../headers//usr/include/locale.h
../headers//usr/include/x86_64-linux-gnu/bits/types.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h
../headers//usr/include/wctype.h
../headers//usr/include/stdlib.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h
./transterm.h
../headers//usr/include/_G_config.h
../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h
../headers//usr/include/x86_64-linux-gnu/bits/stdio.h
../headers//usr/include/string.h
./util.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h
../headers//usr/include/assert.h
ermolaeva-score.cc
../headers//usr/include/c++/4.9/bits/stl_vector.h
../headers//usr/include/c++/4.9/bits/stl_iterator.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h
../headers//usr/include/c++/4.9/bits/stl_construct.h
../headers//usr/include/c++/4.9/bits/basic_string.h
../headers//usr/include/c++/4.9/ext/atomicity.h
../headers//usr/include/c++/4.9/ext/new_allocator.h
./ermolaeva-score.h
../headers//usr/include/c++/4.9/bits/stl_algobase.h
../headers//usr/include/c++/4.9/iostream
../headers//usr/include/c++/4.9/cwchar
../headers//usr/include/c++/4.9/bits/char_traits.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h
../headers//usr/include/c++/4.9/bits/allocator.h
../headers//usr/include/c++/4.9/clocale
../headers//usr/include/c++/4.9/bits/basic_string.tcc
../headers//usr/include/c++/4.9/bits/stringfwd.h
../headers//usr/include/c++/4.9/bits/ios_base.h
../headers//usr/include/c++/4.9/cwctype
../headers//usr/include/c++/4.9/bits/stl_list.h
../headers//usr/include/c++/4.9/cstdlib
../headers//usr/include/c++/4.9/cstdio
../headers//usr/include/c++/4.9/cstring
../headers//usr/include/c++/4.9/bits/list.tcc
../headers//usr/include/c++/4.9/bits/vector.tcc
../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h
../headers//usr/include/c++/4.9/bits/move.h
../headers//usr/include/c++/4.9/bits/cpp_type_traits.h
../headers//usr/include/c++/4.9/debug/debug.h
../headers//usr/include/c++/4.9/bits/predefined_ops.h
../headers//usr/include/c++/4.9/ext/numeric_traits.h
../headers//usr/include/c++/4.9/ext/alloc_traits.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h
../headers//usr/include/wchar.h
../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h
../headers//usr/include/time.h
../headers//usr/include/locale.h
../headers//usr/include/x86_64-linux-gnu/bits/types.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h
../headers//usr/include/wctype.h
./transterm.h
../headers//usr/include/stdlib.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h
../headers//usr/include/_G_config.h
../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h
../headers//usr/include/x86_64-linux-gnu/bits/stdio.h
../headers//usr/include/string.h
./seq.h
./util.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h
../headers//usr/include/c++/4.9/new
unassigned
../headers//usr/include/c++/4.9/bits/basic_string.h
../headers//usr/include/c++/4.9/ext/atomicity.h
util.cc
../headers//usr/include/c++/4.9/bits/basic_ios.h
../headers//usr/include/c++/4.9/ostream
../headers//usr/include/c++/4.9/streambuf
../headers//usr/include/c++/4.9/sstream
../headers//usr/include/c++/4.9/bits/basic_string.tcc
../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h
../headers//usr/include/c++/4.9/bits/char_traits.h
../headers//usr/include/c++/4.9/bits/stl_construct.h
../headers//usr/include/c++/4.9/bits/vector.tcc
../headers//usr/include/c++/4.9/ext/new_allocator.h
../headers//usr/include/c++/4.9/bits/stl_algobase.h
../headers//usr/include/c++/4.9/bits/stl_vector.h
../headers//usr/include/c++/4.9/bits/stl_iterator.h
../headers//usr/include/c++/4.9/bits/stl_uninitialized.h
../headers//usr/include/c++/4.9/iostream
../headers//usr/include/stdio.h
../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h
../headers//usr/include/wchar.h
../headers//usr/include/c++/4.9/cwchar
../headers//usr/include/c++/4.9/bits/cpp_type_traits.h
../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h
../headers//usr/include/c++/4.9/clocale
../headers//usr/include/c++/4.9/bits/allocator.h
../headers//usr/include/c++/4.9/bits/stringfwd.h
../headers//usr/include/c++/4.9/bits/ios_base.h
../headers//usr/include/c++/4.9/cwctype
../headers//usr/include/c++/4.9/bits/ostream.tcc
../headers//usr/include/c++/4.9/cstdlib
../headers//usr/include/c++/4.9/bits/basic_ios.tcc
../headers//usr/include/c++/4.9/bits/move.h
../headers//usr/include/c++/4.9/iosfwd
../headers//usr/include/c++/4.9/bits/ostream_insert.h
../headers//usr/include/c++/4.9/bits/postypes.h
../headers//usr/include/c++/4.9/bits/functexcept.h
../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h
../headers//usr/include/time.h
../headers//usr/include/c++/4.9/debug/debug.h
../headers//usr/include/c++/4.9/bits/predefined_ops.h
../headers//usr/include/c++/4.9/ext/numeric_traits.h
../headers//usr/include/c++/4.9/ext/alloc_traits.h
../headers//usr/include/c++/4.9/ext/type_traits.h
../headers//usr/include/locale.h
../headers//usr/include/x86_64-linux-gnu/bits/types.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h
../headers//usr/include/wctype.h
../headers//usr/include/stdlib.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h
./util.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h
../headers//usr/include/c++/4.9/new
../headers//usr/include/ctype.h
unassigned
../headers//usr/include/c++/4.9/bits/locale_facets.h
./seq.h
../headers//usr/include/c++/4.9/bits/basic_string.h
../headers//usr/include/c++/4.9/ext/atomicity.h
../headers//usr/include/c++/4.9/bits/list.tcc
../headers//usr/include/c++/4.9/ext/new_allocator.h
2ndscore.cc
../headers//usr/include/c++/4.9/ostream
../headers//usr/include/c++/4.9/bits/basic_ios.h
../headers//usr/include/c++/4.9/bits/stl_vector.h
../headers//usr/include/c++/4.9/iomanip
../headers//usr/include/c++/4.9/bits/ios_base.h
../headers//usr/include/stdlib.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h
../headers//usr/include/c++/4.9/bits/stl_construct.h
../headers//usr/include/c++/4.9/istream
../headers//usr/include/c++/4.9/fstream
../headers//usr/include/c++/4.9/streambuf
../headers//usr/include/c++/4.9/bits/stl_iterator.h
../headers//usr/include/c++/4.9/iostream
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h
../headers//usr/include/c++/4.9/bits/allocator.h
../headers//usr/include/c++/4.9/bits/cpp_type_traits.h
../headers//usr/include/c++/4.9/cwchar
../headers//usr/include/c++/4.9/bits/char_traits.h
../headers//usr/include/c++/4.9/clocale
../headers//usr/include/c++/4.9/bits/basic_string.tcc
../headers//usr/include/c++/4.9/bits/stringfwd.h
../headers//usr/include/c++/4.9/cwctype
../headers//usr/include/c++/4.9/bits/ostream.tcc
../headers//usr/include/c++/4.9/cstdio
../headers//usr/include/c++/4.9/bits/postypes.h
../headers//usr/include/c++/4.9/cstdlib
../headers//usr/include/c++/4.9/bits/stl_list.h
../headers//usr/include/c++/4.9/cstring
../headers//usr/include/c++/4.9/bits/vector.tcc
../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h
../headers//usr/include/c++/4.9/bits/basic_ios.tcc
../headers//usr/include/c++/4.9/bits/move.h
../headers//usr/include/c++/4.9/iosfwd
../headers//usr/include/c++/4.9/bits/fstream.tcc
../headers//usr/include/c++/4.9/bits/ostream_insert.h
../headers//usr/include/c++/4.9/debug/debug.h
../headers//usr/include/c++/4.9/bits/predefined_ops.h
../headers//usr/include/c++/4.9/ext/numeric_traits.h
../headers//usr/include/c++/4.9/ext/alloc_traits.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h
../headers//usr/include/wchar.h
../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h
../headers//usr/include/c++/4.9/bits/functexcept.h
../headers//usr/include/time.h
../headers//usr/include/locale.h
../headers//usr/include/x86_64-linux-gnu/bits/types.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h
../headers//usr/include/wctype.h
../headers//usr/include/_G_config.h
../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h
../headers//usr/include/x86_64-linux-gnu/bits/stdio.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h
../headers//usr/include/getopt.h
../headers//usr/include/string.h
./util.h
./search.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h
./ermolaeva-score.h
../headers//usr/include/c++/4.9/new
../headers//usr/include/assert.h
libraries
../libs/usr/lib/x86_64-linux-gnu/libstdc++.so.6
../libs/lib/x86_64-linux-gnu/libm.so.6
../libs/lib/x86_64-linux-gnu/libgcc_s.so.1
../libs/lib/x86_64-linux-gnu/libc.so.6
manual
../man/2ndscore.1.gz
transterm
compile units
unassigned
seq.cc
Gimple
./seq.cc.004t.gimple
GKD
./seq.o.gkd
OBJ
obj: ./seq.o
distr.cc
Gimple
./distr.cc.004t.gimple
GKD
./distr.o.gkd
OBJ
obj: ./distr.o
unassigned
util.cc
Gimple
./util.cc.004t.gimple
GKD
./util.o.gkd
OBJ
obj: ./util.o
unassigned
map-output.cc
Gimple
./map-output.cc.004t.gimple
GKD
./map-output.o.gkd
OBJ
obj: ./map-output.o
unassigned
gene-reader.cc
Gimple
./gene-reader.cc.004t.gimple
GKD
./gene-reader.o.gkd
OBJ
obj: ./gene-reader.o
unassigned
search.cc
Gimple
./search.cc.004t.gimple
GKD
./search.o.gkd
OBJ
obj: ./search.o
unassigned
conf.cc
Gimple
./conf.cc.004t.gimple
GKD
./conf.o.gkd
OBJ
obj: ./conf.o
ermolaeva-score.cc
Gimple
./ermolaeva-score.cc.004t.gimple
GKD
./ermolaeva-score.o.gkd
OBJ
obj: ./ermolaeva-score.o
unassigned
ermolaeva-oldconf.cc
Gimple
./ermolaeva-oldconf.cc.004t.gimple
GKD
./ermolaeva-oldconf.o.gkd
OBJ
obj: ./ermolaeva-oldconf.o
unassigned
analysis.cc
Gimple
./analysis.cc.004t.gimple
GKD
./analysis.o.gkd
OBJ
obj: ./analysis.o
unassigned
anti.cc
Gimple
./anti.cc.004t.gimple
GKD
./anti.o.gkd
OBJ
obj: ./anti.o
unassigned
transterm.cc
Gimple
./transterm.cc.004t.gimple
GKD
./transterm.o.gkd
OBJ
obj: ./transterm.o
includes
unassigned
./seq.h
seq.cc
../headers//usr/include/c++/4.9/bits/basic_string.h
../headers//usr/include/c++/4.9/ext/atomicity.h
../headers//usr/include/c++/4.9/ostream
../headers//usr/include/c++/4.9/bits/stl_heap.h
../headers//usr/include/c++/4.9/bits/stl_iterator.h
../headers//usr/include/c++/4.9/bits/predefined_ops.h
../headers//usr/include/c++/4.9/bits/stl_algo.h
../headers//usr/include/c++/4.9/bits/stl_algobase.h
../headers//usr/include/c++/4.9/bits/list.tcc
../headers//usr/include/c++/4.9/bits/stl_list.h
../headers//usr/include/c++/4.9/ext/new_allocator.h
../headers//usr/include/c++/4.9/bits/move.h
../headers//usr/include/c++/4.9/bits/stl_vector.h
../headers//usr/include/c++/4.9/bits/char_traits.h
../headers//usr/include/x86_64-linux-gnu/bits/string3.h
../headers//usr/include/c++/4.9/bits/basic_string.tcc
../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h
../headers//usr/include/c++/4.9/iomanip
../headers//usr/include/c++/4.9/bits/ios_base.h
../headers//usr/include/c++/4.9/bits/stl_construct.h
../headers//usr/include/c++/4.9/bits/vector.tcc
../headers//usr/include/c++/4.9/bits/stl_uninitialized.h
../headers//usr/include/c++/4.9/cstdlib
../headers//usr/include/c++/4.9/iostream
../headers//usr/include/libio.h
../headers//usr/include/stdio.h
../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h
../headers//usr/include/wchar.h
../headers//usr/include/c++/4.9/cwchar
../headers//usr/include/c++/4.9/bits/cpp_type_traits.h
../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h
../headers//usr/include/c++/4.9/clocale
../headers//usr/include/c++/4.9/new
../headers//usr/include/c++/4.9/bits/allocator.h
../headers//usr/include/c++/4.9/bits/stringfwd.h
../headers//usr/include/c++/4.9/cwctype
../headers//usr/include/c++/4.9/bits/ostream.tcc
../headers//usr/include/c++/4.9/istream
../headers//usr/include/c++/4.9/bits/locale_facets.h
../headers//usr/include/c++/4.9/cstdio
../headers//usr/include/c++/4.9/cstring
../headers//usr/include/c++/4.9/bits/basic_ios.h
../headers//usr/include/c++/4.9/bits/postypes.h
../headers//usr/include/c++/4.9/iosfwd
../headers//usr/include/c++/4.9/bits/ostream_insert.h
../headers//usr/include/c++/4.9/bits/functexcept.h
../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h
../headers//usr/include/time.h
../headers//usr/include/c++/4.9/ext/numeric_traits.h
../headers//usr/include/c++/4.9/ext/alloc_traits.h
../headers//usr/include/c++/4.9/ext/type_traits.h
../headers//usr/include/c++/4.9/debug/debug.h
../headers//usr/include/locale.h
../headers//usr/include/x86_64-linux-gnu/bits/types.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h
../headers//usr/include/wctype.h
../headers//usr/include/stdlib.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h
./util.h
../headers//usr/include/_G_config.h
../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h
../headers//usr/include/x86_64-linux-gnu/bits/stdio.h
../headers//usr/include/string.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h
../headers//usr/include/assert.h
../headers//usr/include/ctype.h
distr.cc
../headers//usr/include/c++/4.9/ostream
../headers//usr/include/c++/4.9/bits/stl_vector.h
./distr.h
../headers//usr/include/c++/4.9/bits/stl_algobase.h
../headers//usr/include/c++/4.9/iostream
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h
../headers//usr/include/c++/4.9/cwchar
../headers//usr/include/c++/4.9/bits/char_traits.h
../headers//usr/include/c++/4.9/clocale
../headers//usr/include/c++/4.9/bits/ios_base.h
../headers//usr/include/c++/4.9/cwctype
../headers//usr/include/c++/4.9/bits/allocator.h
../headers//usr/include/c++/4.9/bits/ostream.tcc
../headers//usr/include/c++/4.9/bits/vector.tcc
../headers//usr/include/c++/4.9/bits/basic_ios.h
../headers//usr/include/c++/4.9/iosfwd
../headers//usr/include/c++/4.9/bits/ostream_insert.h
../headers//usr/include/c++/4.9/bits/postypes.h
../headers//usr/include/c++/4.9/debug/debug.h
../headers//usr/include/c++/4.9/bits/predefined_ops.h
../headers//usr/include/c++/4.9/ext/new_allocator.h
../headers//usr/include/c++/4.9/ext/numeric_traits.h
../headers//usr/include/c++/4.9/ext/alloc_traits.h
../headers//usr/include/c++/4.9/bits/cpp_type_traits.h
../headers//usr/include/stdio.h
../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h
../headers//usr/include/wchar.h
../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h
../headers//usr/include/time.h
../headers//usr/include/locale.h
../headers//usr/include/x86_64-linux-gnu/bits/types.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h
../headers//usr/include/wctype.h
unassigned
../headers//usr/include/c++/4.9/bits/basic_string.h
../headers//usr/include/c++/4.9/ext/atomicity.h
util.cc
../headers//usr/include/c++/4.9/bits/basic_ios.h
../headers//usr/include/c++/4.9/ostream
../headers//usr/include/c++/4.9/streambuf
../headers//usr/include/c++/4.9/sstream
../headers//usr/include/c++/4.9/bits/basic_string.tcc
../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h
../headers//usr/include/c++/4.9/bits/char_traits.h
../headers//usr/include/c++/4.9/bits/stl_construct.h
../headers//usr/include/c++/4.9/bits/vector.tcc
../headers//usr/include/c++/4.9/ext/new_allocator.h
../headers//usr/include/c++/4.9/bits/stl_algobase.h
../headers//usr/include/c++/4.9/bits/stl_vector.h
../headers//usr/include/c++/4.9/bits/stl_iterator.h
../headers//usr/include/c++/4.9/bits/stl_uninitialized.h
../headers//usr/include/c++/4.9/iostream
../headers//usr/include/stdio.h
../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h
../headers//usr/include/wchar.h
../headers//usr/include/c++/4.9/cwchar
../headers//usr/include/c++/4.9/bits/cpp_type_traits.h
../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h
../headers//usr/include/c++/4.9/clocale
../headers//usr/include/c++/4.9/bits/allocator.h
../headers//usr/include/c++/4.9/bits/stringfwd.h
../headers//usr/include/c++/4.9/bits/ios_base.h
../headers//usr/include/c++/4.9/cwctype
../headers//usr/include/c++/4.9/bits/ostream.tcc
../headers//usr/include/c++/4.9/cstdlib
../headers//usr/include/c++/4.9/bits/basic_ios.tcc
../headers//usr/include/c++/4.9/bits/move.h
../headers//usr/include/c++/4.9/iosfwd
../headers//usr/include/c++/4.9/bits/ostream_insert.h
../headers//usr/include/c++/4.9/bits/postypes.h
../headers//usr/include/c++/4.9/bits/functexcept.h
../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h
../headers//usr/include/time.h
../headers//usr/include/c++/4.9/debug/debug.h
../headers//usr/include/c++/4.9/bits/predefined_ops.h
../headers//usr/include/c++/4.9/ext/numeric_traits.h
../headers//usr/include/c++/4.9/ext/alloc_traits.h
../headers//usr/include/c++/4.9/ext/type_traits.h
../headers//usr/include/locale.h
../headers//usr/include/x86_64-linux-gnu/bits/types.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h
../headers//usr/include/wctype.h
../headers//usr/include/stdlib.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h
./util.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h
../headers//usr/include/c++/4.9/new
../headers//usr/include/ctype.h
unassigned
../headers//usr/include/c++/4.9/bits/locale_facets.h
./seq.h
map-output.cc
../headers//usr/include/c++/4.9/bits/basic_string.h
../headers//usr/include/c++/4.9/ext/atomicity.h
../headers//usr/include/c++/4.9/cstdlib
../headers//usr/include/c++/4.9/ostream
../headers//usr/include/c++/4.9/bits/basic_ios.h
../headers//usr/include/c++/4.9/bits/stl_vector.h
../headers//usr/include/c++/4.9/bits/stl_construct.h
../headers//usr/include/c++/4.9/ext/new_allocator.h
../headers//usr/include/c++/4.9/iomanip
../headers//usr/include/c++/4.9/bits/ios_base.h
../headers//usr/include/c++/4.9/bits/stl_iterator.h
../headers//usr/include/c++/4.9/sstream
../headers//usr/include/c++/4.9/streambuf
../headers//usr/include/c++/4.9/bits/stl_algobase.h
../headers//usr/include/c++/4.9/bits/basic_string.tcc
../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h
../headers//usr/include/c++/4.9/bits/char_traits.h
../headers//usr/include/c++/4.9/bits/stl_list.h
../headers//usr/include/c++/4.9/bits/vector.tcc
../headers//usr/include/c++/4.9/bits/stl_uninitialized.h
../headers//usr/include/c++/4.9/iostream
../headers//usr/include/libio.h
../headers//usr/include/stdio.h
../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h
../headers//usr/include/wchar.h
../headers//usr/include/c++/4.9/cwchar
../headers//usr/include/c++/4.9/bits/cpp_type_traits.h
../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h
../headers//usr/include/c++/4.9/clocale
../headers//usr/include/c++/4.9/bits/allocator.h
../headers//usr/include/c++/4.9/bits/stringfwd.h
../headers//usr/include/c++/4.9/cwctype
../headers//usr/include/c++/4.9/bits/ostream.tcc
../headers//usr/include/c++/4.9/cstdio
../headers//usr/include/c++/4.9/cstring
../headers//usr/include/c++/4.9/bits/list.tcc
../headers//usr/include/c++/4.9/iosfwd
../headers//usr/include/c++/4.9/bits/basic_ios.tcc
../headers//usr/include/c++/4.9/bits/postypes.h
../headers//usr/include/c++/4.9/bits/move.h
../headers//usr/include/c++/4.9/bits/ostream_insert.h
../headers//usr/include/c++/4.9/bits/functexcept.h
../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h
../headers//usr/include/time.h
../headers//usr/include/c++/4.9/debug/debug.h
../headers//usr/include/c++/4.9/bits/predefined_ops.h
../headers//usr/include/c++/4.9/ext/numeric_traits.h
../headers//usr/include/c++/4.9/ext/alloc_traits.h
../headers//usr/include/c++/4.9/ext/type_traits.h
../headers//usr/include/locale.h
../headers//usr/include/x86_64-linux-gnu/bits/types.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h
../headers//usr/include/wctype.h
../headers//usr/include/stdlib.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h
../headers//usr/include/_G_config.h
../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h
../headers//usr/include/x86_64-linux-gnu/bits/stdio.h
../headers//usr/include/string.h
./distr.h
./util.h
./transterm.h
./conf.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h
../headers//usr/include/c++/4.9/new
unassigned
../headers//usr/include/c++/4.9/bits/locale_facets.h
./seq.h
./gene-reader.h
../headers//usr/include/c++/4.9/bits/basic_ios.h
../headers//usr/include/c++/4.9/bits/basic_string.h
../headers//usr/include/c++/4.9/ext/atomicity.h
../headers//usr/include/c++/4.9/fstream
../headers//usr/include/c++/4.9/streambuf
../headers//usr/include/c++/4.9/istream
gene-reader.cc
../headers//usr/include/c++/4.9/bits/ios_base.h
../headers//usr/include/c++/4.9/sstream
../headers//usr/include/c++/4.9/bits/vector.tcc
../headers//usr/include/c++/4.9/ext/new_allocator.h
../headers//usr/include/c++/4.9/bits/stl_algobase.h
../headers//usr/include/c++/4.9/bits/stl_vector.h
../headers//usr/include/c++/4.9/bits/stl_iterator.h
../headers//usr/include/stdlib.h
../headers//usr/include/c++/4.9/ostream
../headers//usr/include/c++/4.9/bits/stl_construct.h
../headers//usr/include/c++/4.9/iostream
../headers//usr/include/libio.h
../headers//usr/include/stdio.h
../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h
../headers//usr/include/wchar.h
../headers//usr/include/c++/4.9/cwchar
../headers//usr/include/c++/4.9/bits/cpp_type_traits.h
../headers//usr/include/c++/4.9/bits/char_traits.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h
../headers//usr/include/c++/4.9/clocale
../headers//usr/include/c++/4.9/bits/allocator.h
../headers//usr/include/c++/4.9/bits/basic_string.tcc
../headers//usr/include/c++/4.9/bits/stringfwd.h
../headers//usr/include/c++/4.9/cwctype
../headers//usr/include/c++/4.9/bits/ostream.tcc
../headers//usr/include/c++/4.9/bits/istream.tcc
../headers//usr/include/c++/4.9/cstdio
../headers//usr/include/c++/4.9/bits/postypes.h
../headers//usr/include/c++/4.9/bits/stl_uninitialized.h
../headers//usr/include/c++/4.9/bits/stl_list.h
../headers//usr/include/c++/4.9/cstdlib
../headers//usr/include/c++/4.9/cstring
../headers//usr/include/c++/4.9/bits/list.tcc
../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h
../headers//usr/include/c++/4.9/iosfwd
../headers//usr/include/c++/4.9/bits/basic_ios.tcc
../headers//usr/include/c++/4.9/bits/move.h
../headers//usr/include/c++/4.9/bits/fstream.tcc
../headers//usr/include/c++/4.9/bits/sstream.tcc
../headers//usr/include/c++/4.9/bits/functexcept.h
../headers//usr/include/c++/4.9/bits/ostream_insert.h
../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h
../headers//usr/include/time.h
../headers//usr/include/c++/4.9/debug/debug.h
../headers//usr/include/c++/4.9/bits/predefined_ops.h
../headers//usr/include/c++/4.9/ext/numeric_traits.h
../headers//usr/include/c++/4.9/ext/alloc_traits.h
../headers//usr/include/locale.h
../headers//usr/include/x86_64-linux-gnu/bits/types.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h
../headers//usr/include/wctype.h
../headers//usr/include/_G_config.h
../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h
../headers//usr/include/x86_64-linux-gnu/bits/stdio.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h
../headers//usr/include/string.h
./util.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h
../headers//usr/include/c++/4.9/new
../headers//usr/include/assert.h
unassigned
../headers//usr/include/c++/4.9/bits/locale_facets.h
./seq.h
./ermolaeva-score.h
../headers//usr/include/c++/4.9/bits/basic_string.h
../headers//usr/include/c++/4.9/ext/atomicity.h
../headers//usr/include/c++/4.9/bits/stl_algo.h
../headers//usr/include/c++/4.9/bits/stl_iterator.h
../headers//usr/include/c++/4.9/bits/stl_algobase.h
../headers//usr/include/c++/4.9/bits/predefined_ops.h
../headers//usr/include/c++/4.9/bits/list.tcc
../headers//usr/include/c++/4.9/ext/new_allocator.h
search.cc
../headers//usr/include/c++/4.9/bits/stl_list.h
../headers//usr/include/c++/4.9/ostream
../headers//usr/include/c++/4.9/bits/basic_ios.h
../headers//usr/include/c++/4.9/cstdlib
../headers//usr/include/c++/4.9/bits/vector.tcc
../headers//usr/include/c++/4.9/bits/stl_vector.h
../headers//usr/include/c++/4.9/bits/stl_uninitialized.h
../headers//usr/include/c++/4.9/bits/stl_construct.h
../headers//usr/include/c++/4.9/bits/stl_heap.h
../headers//usr/include/c++/4.9/bits/move.h
../headers//usr/include/c++/4.9/iostream
../headers//usr/include/libio.h
../headers//usr/include/stdio.h
../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h
../headers//usr/include/wchar.h
../headers//usr/include/c++/4.9/cwchar
../headers//usr/include/c++/4.9/bits/cpp_type_traits.h
../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h
../headers//usr/include/c++/4.9/bits/char_traits.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h
../headers//usr/include/c++/4.9/clocale
../headers//usr/include/c++/4.9/new
../headers//usr/include/c++/4.9/bits/allocator.h
../headers//usr/include/c++/4.9/bits/basic_string.tcc
../headers//usr/include/c++/4.9/bits/stringfwd.h
../headers//usr/include/c++/4.9/bits/ios_base.h
../headers//usr/include/c++/4.9/cwctype
../headers//usr/include/c++/4.9/bits/ostream.tcc
../headers//usr/include/c++/4.9/cstdio
../headers//usr/include/c++/4.9/cstring
../headers//usr/include/c++/4.9/iosfwd
../headers//usr/include/c++/4.9/bits/ostream_insert.h
../headers//usr/include/c++/4.9/bits/postypes.h
../headers//usr/include/c++/4.9/bits/functexcept.h
../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h
../headers//usr/include/time.h
../headers//usr/include/c++/4.9/ext/numeric_traits.h
../headers//usr/include/c++/4.9/ext/alloc_traits.h
../headers//usr/include/c++/4.9/debug/debug.h
../headers//usr/include/locale.h
../headers//usr/include/x86_64-linux-gnu/bits/types.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h
../headers//usr/include/wctype.h
../headers//usr/include/stdlib.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h
./transterm.h
../headers//usr/include/_G_config.h
../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h
../headers//usr/include/x86_64-linux-gnu/bits/stdio.h
../headers//usr/include/string.h
./util.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h
../headers//usr/include/assert.h
unassigned
../headers//usr/include/c++/4.9/bits/locale_facets.h
./seq.h
conf.cc
./conf.h
../headers//usr/include/c++/4.9/bits/stl_vector.h
../headers//usr/include/c++/4.9/ext/new_allocator.h
../headers//usr/include/c++/4.9/bits/stl_algobase.h
./distr.h
../headers//usr/include/c++/4.9/bits/stl_iterator.h
../headers//usr/include/c++/4.9/bits/stl_tree.h
../headers//usr/include/c++/4.9/cmath
../headers//usr/include/c++/4.9/ostream
../headers//usr/include/c++/4.9/bits/basic_ios.h
../headers//usr/include/c++/4.9/bits/vector.tcc
../headers//usr/include/c++/4.9/bits/stl_construct.h
../headers//usr/include/c++/4.9/bits/stl_map.h
../headers//usr/include/c++/4.9/bits/stl_function.h
../headers//usr/include/c++/4.9/bits/stl_pair.h
../headers//usr/include/c++/4.9/bits/stl_uninitialized.h
../headers//usr/include/c++/4.9/bits/basic_string.h
../headers//usr/include/c++/4.9/istream
../headers//usr/include/c++/4.9/fstream
../headers//usr/include/c++/4.9/streambuf
../headers//usr/include/c++/4.9/bits/ios_base.h
../headers//usr/include/c++/4.9/iostream
../headers//usr/include/libio.h
../headers//usr/include/stdio.h
../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h
../headers//usr/include/wchar.h
../headers//usr/include/c++/4.9/cwchar
../headers//usr/include/c++/4.9/bits/cpp_type_traits.h
../headers//usr/include/c++/4.9/bits/char_traits.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h
../headers//usr/include/c++/4.9/clocale
../headers//usr/include/c++/4.9/bits/allocator.h
../headers//usr/include/c++/4.9/bits/basic_string.tcc
../headers//usr/include/c++/4.9/bits/stringfwd.h
../headers//usr/include/c++/4.9/cwctype
../headers//usr/include/c++/4.9/bits/ostream.tcc
../headers//usr/include/c++/4.9/bits/istream.tcc
../headers//usr/include/c++/4.9/cstdio
../headers//usr/include/c++/4.9/bits/postypes.h
../headers//usr/include/c++/4.9/bits/stl_list.h
../headers//usr/include/c++/4.9/cstdlib
../headers//usr/include/c++/4.9/cstring
../headers//usr/include/c++/4.9/bits/list.tcc
../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h
../headers//usr/include/c++/4.9/bits/basic_ios.tcc
../headers//usr/include/c++/4.9/bits/move.h
../headers//usr/include/c++/4.9/bits/fstream.tcc
../headers//usr/include/c++/4.9/iosfwd
../headers//usr/include/c++/4.9/bits/ostream_insert.h
../headers//usr/include/c++/4.9/bits/functexcept.h
../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h
../headers//usr/include/time.h
../headers//usr/include/c++/4.9/debug/debug.h
../headers//usr/include/c++/4.9/bits/predefined_ops.h
../headers//usr/include/c++/4.9/ext/numeric_traits.h
../headers//usr/include/c++/4.9/ext/alloc_traits.h
../headers//usr/include/c++/4.9/ext/type_traits.h
../headers//usr/include/locale.h
../headers//usr/include/x86_64-linux-gnu/bits/types.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h
../headers//usr/include/wctype.h
../headers//usr/include/_G_config.h
../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h
../headers//usr/include/x86_64-linux-gnu/bits/stdio.h
./transterm.h
../headers//usr/include/stdlib.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h
../headers//usr/include/string.h
../headers//usr/include/c++/4.9/new
../headers//usr/include/assert.h
ermolaeva-score.cc
../headers//usr/include/c++/4.9/bits/stl_vector.h
../headers//usr/include/c++/4.9/bits/stl_iterator.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h
../headers//usr/include/c++/4.9/bits/stl_construct.h
../headers//usr/include/c++/4.9/bits/basic_string.h
../headers//usr/include/c++/4.9/ext/atomicity.h
../headers//usr/include/c++/4.9/ext/new_allocator.h
./ermolaeva-score.h
../headers//usr/include/c++/4.9/bits/stl_algobase.h
../headers//usr/include/c++/4.9/iostream
../headers//usr/include/c++/4.9/cwchar
../headers//usr/include/c++/4.9/bits/char_traits.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h
../headers//usr/include/c++/4.9/bits/allocator.h
../headers//usr/include/c++/4.9/clocale
../headers//usr/include/c++/4.9/bits/basic_string.tcc
../headers//usr/include/c++/4.9/bits/stringfwd.h
../headers//usr/include/c++/4.9/bits/ios_base.h
../headers//usr/include/c++/4.9/cwctype
../headers//usr/include/c++/4.9/bits/stl_list.h
../headers//usr/include/c++/4.9/cstdlib
../headers//usr/include/c++/4.9/cstdio
../headers//usr/include/c++/4.9/cstring
../headers//usr/include/c++/4.9/bits/list.tcc
../headers//usr/include/c++/4.9/bits/vector.tcc
../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h
../headers//usr/include/c++/4.9/bits/move.h
../headers//usr/include/c++/4.9/bits/cpp_type_traits.h
../headers//usr/include/c++/4.9/debug/debug.h
../headers//usr/include/c++/4.9/bits/predefined_ops.h
../headers//usr/include/c++/4.9/ext/numeric_traits.h
../headers//usr/include/c++/4.9/ext/alloc_traits.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h
../headers//usr/include/wchar.h
../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h
../headers//usr/include/time.h
../headers//usr/include/locale.h
../headers//usr/include/x86_64-linux-gnu/bits/types.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h
../headers//usr/include/wctype.h
./transterm.h
../headers//usr/include/stdlib.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h
../headers//usr/include/_G_config.h
../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h
../headers//usr/include/x86_64-linux-gnu/bits/stdio.h
../headers//usr/include/string.h
./seq.h
./util.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h
../headers//usr/include/c++/4.9/new
unassigned
../headers//usr/include/c++/4.9/bits/locale_facets.h
./seq.h
../headers//usr/include/c++/4.9/bits/basic_string.h
../headers//usr/include/c++/4.9/ext/atomicity.h
ermolaeva-oldconf.cc
./conf.h
../headers//usr/include/c++/4.9/bits/stl_vector.h
../headers//usr/include/c++/4.9/ext/new_allocator.h
../headers//usr/include/c++/4.9/bits/list.tcc
../headers//usr/include/c++/4.9/bits/stl_iterator.h
../headers//usr/include/c++/4.9/bits/stl_algobase.h
../headers//usr/include/c++/4.9/bits/vector.tcc
../headers//usr/include/c++/4.9/iomanip
../headers//usr/include/c++/4.9/bits/ios_base.h
../headers//usr/include/c++/4.9/ostream
../headers//usr/include/c++/4.9/bits/basic_ios.h
../headers//usr/include/c++/4.9/cstdlib
../headers//usr/include/c++/4.9/bits/stl_list.h
./distr.h
../headers//usr/include/c++/4.9/iostream
../headers//usr/include/c++/4.9/bits/cpp_type_traits.h
../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h
../headers//usr/include/c++/4.9/bits/allocator.h
../headers//usr/include/c++/4.9/bits/stl_construct.h
../headers//usr/include/c++/4.9/bits/stl_uninitialized.h
../headers//usr/include/c++/4.9/cwchar
../headers//usr/include/c++/4.9/bits/char_traits.h
../headers//usr/include/c++/4.9/clocale
../headers//usr/include/c++/4.9/bits/basic_string.tcc
../headers//usr/include/c++/4.9/bits/stringfwd.h
../headers//usr/include/c++/4.9/cwctype
../headers//usr/include/c++/4.9/bits/ostream.tcc
../headers//usr/include/c++/4.9/cstdio
../headers//usr/include/c++/4.9/cstring
../headers//usr/include/c++/4.9/bits/postypes.h
../headers//usr/include/c++/4.9/bits/move.h
../headers//usr/include/c++/4.9/iosfwd
../headers//usr/include/c++/4.9/bits/ostream_insert.h
../headers//usr/include/c++/4.9/bits/functexcept.h
../headers//usr/include/c++/4.9/debug/debug.h
../headers//usr/include/c++/4.9/bits/predefined_ops.h
../headers//usr/include/c++/4.9/ext/numeric_traits.h
../headers//usr/include/c++/4.9/ext/alloc_traits.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h
../headers//usr/include/wchar.h
../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h
../headers//usr/include/time.h
../headers//usr/include/locale.h
../headers//usr/include/x86_64-linux-gnu/bits/types.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h
../headers//usr/include/wctype.h
../headers//usr/include/stdlib.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h
../headers//usr/include/_G_config.h
../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h
../headers//usr/include/x86_64-linux-gnu/bits/stdio.h
../headers//usr/include/string.h
./util.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h
../headers//usr/include/c++/4.9/new
unassigned
../headers//usr/include/c++/4.9/bits/locale_facets.h
./seq.h
analysis.cc
../headers//usr/include/c++/4.9/bits/stl_vector.h
../headers//usr/include/c++/4.9/ext/new_allocator.h
../headers//usr/include/c++/4.9/bits/stl_heap.h
../headers//usr/include/c++/4.9/bits/stl_iterator.h
../headers//usr/include/c++/4.9/bits/predefined_ops.h
../headers//usr/include/c++/4.9/bits/stl_algo.h
../headers//usr/include/c++/4.9/bits/stl_algobase.h
../headers//usr/include/c++/4.9/bits/move.h
../headers//usr/include/c++/4.9/ostream
../headers//usr/include/c++/4.9/bits/basic_ios.h
../headers//usr/include/c++/4.9/bits/char_traits.h
../headers//usr/include/c++/4.9/bits/vector.tcc
../headers//usr/include/c++/4.9/iomanip
../headers//usr/include/c++/4.9/bits/basic_string.h
../headers//usr/include/c++/4.9/bits/ios_base.h
../headers//usr/include/c++/4.9/iostream
../headers//usr/include/libio.h
../headers//usr/include/stdio.h
../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h
../headers//usr/include/wchar.h
../headers//usr/include/c++/4.9/cwchar
../headers//usr/include/c++/4.9/bits/cpp_type_traits.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h
../headers//usr/include/c++/4.9/clocale
../headers//usr/include/c++/4.9/bits/allocator.h
../headers//usr/include/c++/4.9/bits/basic_string.tcc
../headers//usr/include/c++/4.9/bits/stringfwd.h
../headers//usr/include/c++/4.9/cwctype
../headers//usr/include/c++/4.9/bits/ostream.tcc
../headers//usr/include/c++/4.9/bits/stl_construct.h
../headers//usr/include/c++/4.9/bits/stl_uninitialized.h
../headers//usr/include/c++/4.9/cstdlib
../headers//usr/include/c++/4.9/bits/stl_list.h
../headers//usr/include/c++/4.9/cstdio
../headers//usr/include/c++/4.9/cstring
../headers//usr/include/c++/4.9/bits/list.tcc
../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h
../headers//usr/include/c++/4.9/iosfwd
../headers//usr/include/c++/4.9/bits/postypes.h
../headers//usr/include/c++/4.9/bits/ostream_insert.h
../headers//usr/include/c++/4.9/bits/functexcept.h
../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h
../headers//usr/include/time.h
../headers//usr/include/c++/4.9/ext/numeric_traits.h
../headers//usr/include/c++/4.9/ext/alloc_traits.h
../headers//usr/include/c++/4.9/ext/type_traits.h
../headers//usr/include/c++/4.9/debug/debug.h
../headers//usr/include/locale.h
../headers//usr/include/x86_64-linux-gnu/bits/types.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h
../headers//usr/include/wctype.h
../headers//usr/include/stdlib.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h
../headers//usr/include/_G_config.h
../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h
../headers//usr/include/x86_64-linux-gnu/bits/stdio.h
../headers//usr/include/string.h
./distr.h
./util.h
./transterm.h
./conf.h
../headers//usr/include/c++/4.9/new
./ermolaeva-score.h
../headers//usr/include/assert.h
unassigned
../headers//usr/include/c++/4.9/bits/locale_facets.h
./seq.h
anti.cc
../headers//usr/include/c++/4.9/bits/basic_string.h
../headers//usr/include/c++/4.9/ext/atomicity.h
../headers//usr/include/c++/4.9/bits/list.tcc
../headers//usr/include/c++/4.9/ext/new_allocator.h
../headers//usr/include/c++/4.9/bits/stl_list.h
../headers//usr/include/c++/4.9/ostream
../headers//usr/include/c++/4.9/bits/basic_ios.h
../headers//usr/include/c++/4.9/bits/stl_iterator.h
../headers//usr/include/c++/4.9/iostream
../headers//usr/include/libio.h
../headers//usr/include/stdio.h
../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h
../headers//usr/include/wchar.h
../headers//usr/include/c++/4.9/cwchar
../headers//usr/include/c++/4.9/bits/cpp_type_traits.h
../headers//usr/include/c++/4.9/bits/char_traits.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h
../headers//usr/include/c++/4.9/clocale
../headers//usr/include/c++/4.9/bits/allocator.h
../headers//usr/include/c++/4.9/bits/basic_string.tcc
../headers//usr/include/c++/4.9/bits/stringfwd.h
../headers//usr/include/c++/4.9/bits/ios_base.h
../headers//usr/include/c++/4.9/cwctype
../headers//usr/include/c++/4.9/bits/ostream.tcc
../headers//usr/include/c++/4.9/cstdlib
../headers//usr/include/c++/4.9/cstdio
../headers//usr/include/c++/4.9/cstring
../headers//usr/include/c++/4.9/bits/stl_vector.h
../headers//usr/include/c++/4.9/bits/vector.tcc
../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h
../headers//usr/include/c++/4.9/iosfwd
../headers//usr/include/c++/4.9/bits/move.h
../headers//usr/include/c++/4.9/bits/ostream_insert.h
../headers//usr/include/c++/4.9/bits/postypes.h
../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h
../headers//usr/include/c++/4.9/bits/functexcept.h
../headers//usr/include/time.h
../headers//usr/include/c++/4.9/debug/debug.h
../headers//usr/include/c++/4.9/bits/predefined_ops.h
../headers//usr/include/c++/4.9/ext/numeric_traits.h
../headers//usr/include/c++/4.9/ext/alloc_traits.h
../headers//usr/include/locale.h
../headers//usr/include/x86_64-linux-gnu/bits/types.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h
../headers//usr/include/wctype.h
./distr.h
../headers//usr/include/stdlib.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h
../headers//usr/include/_G_config.h
../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h
../headers//usr/include/x86_64-linux-gnu/bits/stdio.h
../headers//usr/include/string.h
./transterm.h
./conf.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h
../headers//usr/include/c++/4.9/new
unassigned
../headers//usr/include/c++/4.9/bits/locale_facets.h
../headers//usr/include/c++/4.9/bits/basic_string.h
../headers//usr/include/c++/4.9/ext/atomicity.h
../headers//usr/include/c++/4.9/ostream
../headers//usr/include/c++/4.9/bits/basic_ios.h
../headers//usr/include/c++/4.9/bits/char_traits.h
../headers//usr/include/c++/4.9/bits/ios_base.h
transterm.cc
../headers//usr/include/stdlib.h
./conf.h
./distr.h
../headers//usr/include/c++/4.9/bits/stl_vector.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h
../headers//usr/include/c++/4.9/istream
../headers//usr/include/c++/4.9/fstream
../headers//usr/include/c++/4.9/streambuf
../headers//usr/include/c++/4.9/bits/stl_iterator.h
../headers//usr/include/c++/4.9/ext/new_allocator.h
../headers//usr/include/c++/4.9/iostream
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h
../headers//usr/include/c++/4.9/bits/allocator.h
../headers//usr/include/c++/4.9/cwchar
../headers//usr/include/c++/4.9/bits/stl_construct.h
../headers//usr/include/c++/4.9/clocale
../headers//usr/include/c++/4.9/bits/basic_string.tcc
../headers//usr/include/c++/4.9/bits/stringfwd.h
../headers//usr/include/c++/4.9/cwctype
../headers//usr/include/c++/4.9/bits/ostream.tcc
../headers//usr/include/c++/4.9/cstdio
../headers//usr/include/c++/4.9/bits/postypes.h
../headers//usr/include/c++/4.9/cstdlib
../headers//usr/include/c++/4.9/bits/stl_list.h
../headers//usr/include/c++/4.9/cstring
../headers//usr/include/c++/4.9/bits/list.tcc
../headers//usr/include/c++/4.9/bits/vector.tcc
../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h
../headers//usr/include/c++/4.9/bits/basic_ios.tcc
../headers//usr/include/c++/4.9/iosfwd
../headers//usr/include/c++/4.9/bits/fstream.tcc
../headers//usr/include/c++/4.9/bits/ostream_insert.h
../headers//usr/include/c++/4.9/bits/cpp_type_traits.h
../headers//usr/include/c++/4.9/debug/debug.h
../headers//usr/include/c++/4.9/bits/predefined_ops.h
../headers//usr/include/c++/4.9/ext/numeric_traits.h
../headers//usr/include/c++/4.9/ext/alloc_traits.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h
../headers//usr/include/wchar.h
../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h
../headers//usr/include/c++/4.9/bits/functexcept.h
../headers//usr/include/time.h
../headers//usr/include/locale.h
../headers//usr/include/x86_64-linux-gnu/bits/types.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h
../headers//usr/include/wctype.h
../headers//usr/include/_G_config.h
../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h
../headers//usr/include/x86_64-linux-gnu/bits/stdio.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h
../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h
../headers//usr/include/getopt.h
./transterm.h
../headers//usr/include/string.h
./seq.h
./util.h
./gene-reader.h
./search.h
../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h
./ermolaeva-score.h
../headers//usr/include/c++/4.9/new
./analysis.h
./map-output.h
libraries
../libs/usr/lib/x86_64-linux-gnu/libstdc++.so.6
../libs/lib/x86_64-linux-gnu/libm.so.6
../libs/lib/x86_64-linux-gnu/libgcc_s.so.1
../libs/lib/x86_64-linux-gnu/libc.so.6
manual
../man/transterm.1.gz