mummer - amd64
Documentation
./doc/copyright
./doc/README.gz
./doc/README.Debian
./doc/changelog.Debian.gz
./doc/changelog.gz
./doc/ACKNOWLEDGEMENTS
Binaries
postnuc
compile units
includes
libraries
../libs/usr/lib/x86_64-linux-gnu/libstdc++.so.6
../libs/lib/x86_64-linux-gnu/libm.so.6
../libs/lib/x86_64-linux-gnu/libgcc_s.so.1
../libs/lib/x86_64-linux-gnu/libc.so.6
manual
gaps
compile units
includes
libraries
../libs/usr/lib/x86_64-linux-gnu/libstdc++.so.6
../libs/lib/x86_64-linux-gnu/libm.so.6
../libs/lib/x86_64-linux-gnu/libgcc_s.so.1
../libs/lib/x86_64-linux-gnu/libc.so.6
manual
../man/gaps.1.gz
show-snps
compile units
includes
libraries
../libs/usr/lib/x86_64-linux-gnu/libstdc++.so.6
../libs/lib/x86_64-linux-gnu/libm.so.6
../libs/lib/x86_64-linux-gnu/libgcc_s.so.1
../libs/lib/x86_64-linux-gnu/libc.so.6
manual
../man/show-snps.1.gz
show-diff
compile units
includes
libraries
../libs/usr/lib/x86_64-linux-gnu/libstdc++.so.6
../libs/lib/x86_64-linux-gnu/libm.so.6
../libs/lib/x86_64-linux-gnu/libgcc_s.so.1
../libs/lib/x86_64-linux-gnu/libc.so.6
manual
show-aligns
compile units
includes
libraries
../libs/usr/lib/x86_64-linux-gnu/libstdc++.so.6
../libs/lib/x86_64-linux-gnu/libm.so.6
../libs/lib/x86_64-linux-gnu/libgcc_s.so.1
../libs/lib/x86_64-linux-gnu/libc.so.6
manual
../man/show-aligns.1.gz
postpro
compile units
includes
libraries
../libs/usr/lib/x86_64-linux-gnu/libstdc++.so.6
../libs/lib/x86_64-linux-gnu/libm.so.6
../libs/lib/x86_64-linux-gnu/libgcc_s.so.1
../libs/lib/x86_64-linux-gnu/libc.so.6
manual
delta-filter
compile units
includes
libraries
../libs/usr/lib/x86_64-linux-gnu/libstdc++.so.6
../libs/lib/x86_64-linux-gnu/libm.so.6
../libs/lib/x86_64-linux-gnu/libgcc_s.so.1
../libs/lib/x86_64-linux-gnu/libc.so.6
manual
../man/delta-filter.1.gz
show-tiling
compile units
includes
libraries
../libs/usr/lib/x86_64-linux-gnu/libstdc++.so.6
../libs/lib/x86_64-linux-gnu/libm.so.6
../libs/lib/x86_64-linux-gnu/libgcc_s.so.1
../libs/lib/x86_64-linux-gnu/libc.so.6
manual
../man/show-tiling.1.gz
mgaps
compile units
includes
libraries
../libs/usr/lib/x86_64-linux-gnu/libstdc++.so.6
../libs/lib/x86_64-linux-gnu/libm.so.6
../libs/lib/x86_64-linux-gnu/libgcc_s.so.1
../libs/lib/x86_64-linux-gnu/libc.so.6
manual
../man/mgaps.1.gz
combineMUMs
compile units
includes
libraries
../libs/usr/lib/x86_64-linux-gnu/libstdc++.so.6
../libs/lib/x86_64-linux-gnu/libm.so.6
../libs/lib/x86_64-linux-gnu/libgcc_s.so.1
../libs/lib/x86_64-linux-gnu/libc.so.6
manual
../man/combineMUMs.1.gz
mummer
compile units
maxmat3.c
Gimple
./maxmat3.c.004t.gimple
GKD
./maxmat3.o.gkd
OBJ
obj: ./maxmat3.o
maxmatopt.c
Gimple
./maxmatopt.c.004t.gimple
GKD
./maxmatopt.o.gkd
OBJ
obj: ./maxmatopt.o
maxmatinp.c
Gimple
./maxmatinp.c.004t.gimple
GKD
./maxmatinp.o.gkd
OBJ
obj: ./maxmatinp.o
findmumcand.c
Gimple
./findmumcand.c.004t.gimple
GKD
./findmumcand.o.gkd
OBJ
obj: ./findmumcand.o
findmaxmat.c
Gimple
./findmaxmat.c.004t.gimple
GKD
./findmaxmat.o.gkd
OBJ
obj: ./findmaxmat.o
procmaxmat.c
Gimple
./procmaxmat.c.004t.gimple
GKD
./procmaxmat.o.gkd
OBJ
obj: ./procmaxmat.o
construct.c
Gimple
./construct.c.004t.gimple
GKD
./construct.o.gkd
OBJ
obj: ./construct.o
construct.gen
Gimple
./construct.gen.004t.gimple
GKD
./construct.o.gkd
OBJ
obj: ./construct.o
access.c
Gimple
./access.c.004t.gimple
GKD
./access.o.gkd
OBJ
obj: ./access.o
scanpref.c
Gimple
./scanpref.c.004t.gimple
GKD
./scanpref.o.gkd
OBJ
obj: ./scanpref.o
linkloc.c
Gimple
./linkloc.c.004t.gimple
GKD
./linkloc.o.gkd
OBJ
obj: ./linkloc.o
dfs.c
Gimple
./dfs.c.004t.gimple
GKD
./dfs.o.gkd
OBJ
obj: ./dfs.o
dfs.gen
Gimple
./dfs.gen.004t.gimple
GKD
./dfs.o.gkd
OBJ
obj: ./dfs.o
cleanMUMcand.c
Gimple
./cleanMUMcand.c.004t.gimple
GKD
./cleanMUMcand.o.gkd
OBJ
obj: ./cleanMUMcand.o
clock.c
Gimple
./clock.c.004t.gimple
GKD
./clock.o.gkd
OBJ
obj: ./clock.o
mapfile.c
Gimple
./mapfile.c.004t.gimple
GKD
./mapfile.o.gkd
OBJ
obj: ./mapfile.o
multiseq.c
Gimple
./multiseq.c.004t.gimple
GKD
./multiseq.o.gkd
OBJ
obj: ./multiseq.o
procopt.c
Gimple
./procopt.c.004t.gimple
GKD
./procopt.o.gkd
OBJ
obj: ./procopt.o
safescpy.c
Gimple
./safescpy.c.004t.gimple
GKD
./safescpy.o.gkd
OBJ
obj: ./safescpy.o
seterror.c
Gimple
./seterror.c.004t.gimple
GKD
./seterror.o.gkd
OBJ
obj: ./seterror.o
space.c
Gimple
./space.c.004t.gimple
GKD
./space.o.gkd
OBJ
obj: ./space.o
includes
maxmat3.c
../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h
../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h
../headers//usr/include/x86_64-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//work/mummer-3.23~dfsg/src/kurtz/libbasedir/types.h
../headers//work/mummer-3.23~dfsg/src/kurtz/libbasedir/arraydef.h
../headers//work/mummer-3.23~dfsg/src/kurtz/libbasedir/multidef.h
./maxmatdef.h
../headers//work/mummer-3.23~dfsg/src/kurtz/libbasedir/protodef.h
maxmatopt.c
../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h
../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h
../headers//usr/include/x86_64-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//work/mummer-3.23~dfsg/src/kurtz/libbasedir/types.h
../headers//work/mummer-3.23~dfsg/src/kurtz/libbasedir/optdesc.h
./maxmatdef.h
../headers//work/mummer-3.23~dfsg/src/kurtz/libbasedir/protodef.h
maxmatinp.c
../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h
../headers//usr/include/ctype.h
../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h
../headers//usr/include/x86_64-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//work/mummer-3.23~dfsg/src/kurtz/libbasedir/types.h
../headers//work/mummer-3.23~dfsg/src/kurtz/libbasedir/arraydef.h
../headers//work/mummer-3.23~dfsg/src/kurtz/libbasedir/multidef.h
../headers//work/mummer-3.23~dfsg/src/kurtz/libbasedir/protodef.h
../headers//usr/include/stdlib.h
findmumcand.c
../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h
../headers//usr/include/x86_64-linux-gnu/bits/types.h
../headers//usr/include/libio.h
../headers//work/mummer-3.23~dfsg/src/kurtz/libbasedir/types.h
../headers//work/mummer-3.23~dfsg/src/kurtz/streesrc/symboldef.h
../headers//work/mummer-3.23~dfsg/src/kurtz/streesrc/streetyp.h
./maxmatdef.h
../headers//usr/include/stdio.h
findmaxmat.c
../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h
../headers//usr/include/x86_64-linux-gnu/bits/types.h
../headers//usr/include/libio.h
../headers//work/mummer-3.23~dfsg/src/kurtz/libbasedir/types.h
../headers//work/mummer-3.23~dfsg/src/kurtz/streesrc/symboldef.h
../headers//work/mummer-3.23~dfsg/src/kurtz/streesrc/streetyp.h
./maxmatdef.h
../headers//usr/include/stdio.h
../headers//work/mummer-3.23~dfsg/src/kurtz/libbasedir/spacedef.h
../headers//work/mummer-3.23~dfsg/src/kurtz/streesrc/streeproto.h
procmaxmat.c
../headers//usr/include/x86_64-linux-gnu/bits/stdio.h
../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h
../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h
../headers//usr/include/x86_64-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//work/mummer-3.23~dfsg/src/kurtz/libbasedir/types.h
../headers//work/mummer-3.23~dfsg/src/kurtz/libbasedir/arraydef.h
../headers//work/mummer-3.23~dfsg/src/kurtz/libbasedir/multidef.h
../headers//work/mummer-3.23~dfsg/src/kurtz/libbasedir/mumcand.h
../headers//work/mummer-3.23~dfsg/src/kurtz/streesrc/symboldef.h
../headers//work/mummer-3.23~dfsg/src/kurtz/streesrc/streetyp.h
./maxmatdef.h
../headers//work/mummer-3.23~dfsg/src/kurtz/libbasedir/protodef.h
../headers//usr/include/ctype.h
../headers//work/mummer-3.23~dfsg/src/kurtz/streesrc/streeproto.h
../headers//usr/include/stdlib.h
construct.c
construct.gen
../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h
../headers//usr/include/x86_64-linux-gnu/bits/types.h
../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//work/mummer-3.23~dfsg/src/kurtz/libbasedir/types.h
./symboldef.h
./streetyp.h
../headers//work/mummer-3.23~dfsg/src/kurtz/libbasedir/protodef.h
../headers//usr/include/stdlib.h
access.c
../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h
../headers//usr/include/x86_64-linux-gnu/bits/types.h
../headers//usr/include/libio.h
../headers//work/mummer-3.23~dfsg/src/kurtz/libbasedir/types.h
./symboldef.h
./streetyp.h
../headers//usr/include/stdio.h
../headers//work/mummer-3.23~dfsg/src/kurtz/libbasedir/protodef.h
scanpref.c
../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h
../headers//usr/include/x86_64-linux-gnu/bits/types.h
../headers//usr/include/libio.h
../headers//work/mummer-3.23~dfsg/src/kurtz/libbasedir/types.h
./symboldef.h
./streetyp.h
../headers//usr/include/stdio.h
../headers//work/mummer-3.23~dfsg/src/kurtz/libbasedir/protodef.h
linkloc.c
../headers//usr/include/x86_64-linux-gnu/bits/types.h
../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h
../headers//usr/include/libio.h
../headers//work/mummer-3.23~dfsg/src/kurtz/libbasedir/types.h
./symboldef.h
./streetyp.h
../headers//usr/include/stdio.h
./streeproto.h
dfs.c
dfs.gen
../headers//usr/include/x86_64-linux-gnu/bits/types.h
../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h
../headers//usr/include/libio.h
../headers//work/mummer-3.23~dfsg/src/kurtz/libbasedir/types.h
../headers//work/mummer-3.23~dfsg/src/kurtz/libbasedir/arraydef.h
./symboldef.h
./streetyp.h
../headers//usr/include/stdio.h
../headers//work/mummer-3.23~dfsg/src/kurtz/libbasedir/protodef.h
cleanMUMcand.c
../headers//usr/include/x86_64-linux-gnu/bits/types.h
../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h
../headers//usr/include/stdlib.h
../headers//usr/include/libio.h
./types.h
./mumcand.h
../headers//usr/include/stdio.h
clock.c
../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h
../headers//usr/include/x86_64-linux-gnu/bits/types.h
../headers//usr/include/libio.h
../headers//usr/include/time.h
./types.h
../headers//usr/include/stdio.h
mapfile.c
../headers//usr/include/x86_64-linux-gnu/bits/fcntl2.h
../headers//usr/include/x86_64-linux-gnu/sys/stat.h
../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h
../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h
../headers//usr/include/x86_64-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//usr/include/time.h
../headers//usr/include/x86_64-linux-gnu/bits/stat.h
./types.h
./errordef.h
../headers//usr/include/x86_64-linux-gnu/sys/mman.h
../headers//usr/include/stdlib.h
../headers//usr/include/unistd.h
multiseq.c
../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h
../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h
../headers//usr/include/x86_64-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
./types.h
./arraydef.h
./multidef.h
./protodef.h
../headers//usr/include/stdlib.h
procopt.c
../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h
../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h
../headers//usr/include/x86_64-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
./types.h
./optdesc.h
./protodef.h
../headers//usr/include/string.h
../headers//usr/include/stdlib.h
safescpy.c
../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h
../headers//usr/include/x86_64-linux-gnu/bits/string3.h
../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h
../headers//usr/include/x86_64-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
./types.h
../headers//usr/include/string.h
./protodef.h
../headers//usr/include/stdlib.h
seterror.c
../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h
../headers//usr/include/x86_64-linux-gnu/bits/types.h
../headers//usr/include/libio.h
./types.h
../headers//usr/include/stdio.h
space.c
../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h
../headers//usr/include/x86_64-linux-gnu/bits/string3.h
../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h
../headers//usr/include/x86_64-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//usr/include/x86_64-linux-gnu/bits/resource.h
../headers//usr/include/x86_64-linux-gnu/sys/resource.h
./types.h
../headers//usr/include/stdlib.h
../headers//usr/include/string.h
libraries
../libs/lib/x86_64-linux-gnu/libc.so.6
manual
../man/mummer.1.gz
prenuc
compile units
includes
libraries
../libs/usr/lib/x86_64-linux-gnu/libstdc++.so.6
../libs/lib/x86_64-linux-gnu/libm.so.6
../libs/lib/x86_64-linux-gnu/libgcc_s.so.1
../libs/lib/x86_64-linux-gnu/libc.so.6
manual
show-coords
compile units
includes
libraries
../libs/usr/lib/x86_64-linux-gnu/libstdc++.so.6
../libs/lib/x86_64-linux-gnu/libm.so.6
../libs/lib/x86_64-linux-gnu/libgcc_s.so.1
../libs/lib/x86_64-linux-gnu/libc.so.6
manual
../man/show-coords.1.gz
repeat-match
compile units
includes
libraries
../libs/usr/lib/x86_64-linux-gnu/libstdc++.so.6
../libs/lib/x86_64-linux-gnu/libm.so.6
../libs/lib/x86_64-linux-gnu/libgcc_s.so.1
../libs/lib/x86_64-linux-gnu/libc.so.6
manual
../man/repeat-match.1.gz
mummer-annotate
compile units
includes
libraries
../libs/usr/lib/x86_64-linux-gnu/libstdc++.so.6
../libs/lib/x86_64-linux-gnu/libm.so.6
../libs/lib/x86_64-linux-gnu/libgcc_s.so.1
../libs/lib/x86_64-linux-gnu/libc.so.6
manual
../man/mummer-annotate.1.gz
prepro
compile units
includes
libraries
../libs/usr/lib/x86_64-linux-gnu/libstdc++.so.6
../libs/lib/x86_64-linux-gnu/libm.so.6
../libs/lib/x86_64-linux-gnu/libgcc_s.so.1
../libs/lib/x86_64-linux-gnu/libc.so.6
manual