libstaden-read1 - ppc64el
Documentation
Binaries
scram_test
compile units
scram_test.c
Gimple
./scram_test.c.004t.gimple
GKD
./scram_test.o.gkd
OBJ
obj: ./scram_test.o
includes
scram_test.c
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/include/powerpc64le-linux-gnu/bits/string3.h
../headers//usr/include/stdlib.h
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//usr/include/powerpc64le-linux-gnu/sys/types.h
../headers//usr/include/powerpc64le-linux-gnu/bits/pthreadtypes.h
../headers//usr/include/stdint.h
../headers//usr/include/powerpc64le-linux-gnu/zconf.h
../headers//usr/include/zlib.h
../headers/../io_lib/pooled_alloc.h
../headers/../io_lib/hash_table.h
../headers/../io_lib/dstring.h
../headers/../io_lib/string_alloc.h
../headers/../io_lib/sam_header.h
../headers/../io_lib/thread_pool.h
../headers/../io_lib/bam.h
../headers/../io_lib/cram_structs.h
../headers/../io_lib/binning.h
../headers/../io_lib/cram_codecs.h
../headers/../io_lib/scram.h
../headers//usr/include/getopt.h
../headers/../io_lib/cram_index.h
../headers//usr/include/string.h
../headers/../io_lib/cram_io.h
libraries
../libs/lib/powerpc64le-linux-gnu/libm.so.6
../libs/lib/powerpc64le-linux-gnu/libpthread.so.0
../libs/lib/powerpc64le-linux-gnu/libbz2.so.1.0
../libs/lib/powerpc64le-linux-gnu/libc.so.6
manual
extract_seq
compile units
extract_seq.c
Gimple
./extract_seq.c.004t.gimple
GKD
./extract_seq.o.gkd
OBJ
obj: ./extract_seq.o
includes
extract_seq.c
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers/../io_lib/os.h
../headers/../io_lib/mFILE.h
../headers/../io_lib/Read.h
../headers/../io_lib/array.h
../headers/../io_lib/expFileIO.h
../headers//usr/include/string.h
../headers/../io_lib/compress.h
../headers/../io_lib/open_trace_file.h
../headers//usr/include/stdlib.h
../headers/../io_lib/translate.h
libraries
../libs/lib/powerpc64le-linux-gnu/libm.so.6
../libs/lib/powerpc64le-linux-gnu/libpthread.so.0
../libs/lib/powerpc64le-linux-gnu/libbz2.so.1.0
../libs/lib/powerpc64le-linux-gnu/libc.so.6
manual
scram_flagstat
compile units
scram_flagstat.c
Gimple
./scram_flagstat.c.004t.gimple
GKD
./scram_flagstat.o.gkd
OBJ
obj: ./scram_flagstat.o
includes
scram_flagstat.c
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/include/powerpc64le-linux-gnu/bits/string3.h
../headers//usr/include/stdlib.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//usr/include/powerpc64le-linux-gnu/sys/types.h
../headers//usr/include/powerpc64le-linux-gnu/bits/pthreadtypes.h
../headers//usr/include/stdint.h
../headers//usr/include/powerpc64le-linux-gnu/zconf.h
../headers//usr/include/zlib.h
../headers/../io_lib/pooled_alloc.h
../headers/../io_lib/hash_table.h
../headers/../io_lib/dstring.h
../headers/../io_lib/string_alloc.h
../headers/../io_lib/sam_header.h
../headers/../io_lib/thread_pool.h
../headers/../io_lib/bam.h
../headers/../io_lib/cram_structs.h
../headers/../io_lib/binning.h
../headers/../io_lib/cram_codecs.h
../headers/../io_lib/scram.h
../headers//usr/include/getopt.h
../headers/../io_lib/cram_index.h
../headers//usr/include/string.h
../headers/../io_lib/cram_io.h
libraries
../libs/lib/powerpc64le-linux-gnu/libm.so.6
../libs/lib/powerpc64le-linux-gnu/libpthread.so.0
../libs/lib/powerpc64le-linux-gnu/libbz2.so.1.0
../libs/lib/powerpc64le-linux-gnu/libc.so.6
manual
cram_index
compile units
cram_index.c
Gimple
./cram_index.c.004t.gimple
GKD
./cram_index.o.gkd
OBJ
obj: ./cram_index.o
includes
cram_index.c
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//usr/include/powerpc64le-linux-gnu/sys/types.h
../headers//usr/include/powerpc64le-linux-gnu/bits/pthreadtypes.h
../headers//usr/include/stdint.h
../headers/../io_lib/dstring.h
../headers/../io_lib/pooled_alloc.h
../headers/../io_lib/hash_table.h
../headers/../io_lib/string_alloc.h
../headers/../io_lib/sam_header.h
../headers/../io_lib/thread_pool.h
../headers//usr/include/zlib.h
../headers/../io_lib/bam.h
../headers/../io_lib/cram_structs.h
../headers/../io_lib/binning.h
../headers/../io_lib/cram_codecs.h
../headers/../io_lib/zfio.h
../headers/../io_lib/cram_io.h
../headers/../io_lib/cram_index.h
libraries
../libs/lib/powerpc64le-linux-gnu/libm.so.6
../libs/lib/powerpc64le-linux-gnu/libpthread.so.0
../libs/lib/powerpc64le-linux-gnu/libbz2.so.1.0
../libs/lib/powerpc64le-linux-gnu/libc.so.6
manual
cram_dump
compile units
cram_dump.c
Gimple
./cram_dump.c.004t.gimple
GKD
./cram_dump.o.gkd
OBJ
obj: ./cram_dump.o
includes
cram_dump.c
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//usr/include/powerpc64le-linux-gnu/sys/types.h
../headers//usr/include/powerpc64le-linux-gnu/bits/pthreadtypes.h
../headers//usr/include/stdint.h
../headers/../io_lib/dstring.h
../headers/../io_lib/pooled_alloc.h
../headers/../io_lib/hash_table.h
../headers/../io_lib/string_alloc.h
../headers/../io_lib/sam_header.h
../headers/../io_lib/thread_pool.h
../headers/../io_lib/bam.h
../headers/../io_lib/cram_structs.h
../headers/../io_lib/binning.h
../headers/../io_lib/cram_codecs.h
../headers//usr/include/assert.h
../headers/../io_lib/cram_io.h
../headers//usr/include/string.h
../headers/../io_lib/cram_decode.h
../headers//usr/include/ctype.h
../headers//usr/include/stdlib.h
libraries
../libs/lib/powerpc64le-linux-gnu/libm.so.6
../libs/lib/powerpc64le-linux-gnu/libpthread.so.0
../libs/lib/powerpc64le-linux-gnu/libbz2.so.1.0
../libs/lib/powerpc64le-linux-gnu/libc.so.6
manual
srf_extract_hash
compile units
srf_extract_hash.c
Gimple
./srf_extract_hash.c.004t.gimple
GKD
./srf_extract_hash.o.gkd
OBJ
obj: ./srf_extract_hash.o
includes
srf_extract_hash.c
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//usr/include/powerpc64le-linux-gnu/sys/types.h
../headers//usr/include/stdint.h
../headers/../io_lib/os.h
../headers/../io_lib/mFILE.h
../headers/../io_lib/deflate_interlaced.h
../headers/../io_lib/ztr.h
../headers/../io_lib/srf.h
../headers//usr/include/powerpc64le-linux-gnu/bits/mathcalls.h
../headers//usr/include/stdlib.h
../headers/../io_lib/Read.h
libraries
../libs/lib/powerpc64le-linux-gnu/libm.so.6
../libs/lib/powerpc64le-linux-gnu/libpthread.so.0
../libs/lib/powerpc64le-linux-gnu/libbz2.so.1.0
../libs/lib/powerpc64le-linux-gnu/libc.so.6
manual
srf_extract_linear
compile units
srf_extract_linear.c
Gimple
./srf_extract_linear.c.004t.gimple
GKD
./srf_extract_linear.o.gkd
OBJ
obj: ./srf_extract_linear.o
includes
srf_extract_linear.c
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//usr/include/stdint.h
../headers/../io_lib/os.h
../headers/../io_lib/mFILE.h
../headers/../io_lib/deflate_interlaced.h
../headers/../io_lib/ztr.h
../headers/../io_lib/srf.h
../headers//usr/include/stdlib.h
libraries
../libs/lib/powerpc64le-linux-gnu/libm.so.6
../libs/lib/powerpc64le-linux-gnu/libpthread.so.0
../libs/lib/powerpc64le-linux-gnu/libbz2.so.1.0
../libs/lib/powerpc64le-linux-gnu/libc.so.6
manual
srf_index_hash
compile units
srf_index_hash.c
Gimple
./srf_index_hash.c.004t.gimple
GKD
./srf_index_hash.o.gkd
OBJ
obj: ./srf_index_hash.o
includes
srf_index_hash.c
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//usr/include/powerpc64le-linux-gnu/sys/types.h
../headers//usr/include/stdint.h
../headers/../io_lib/pooled_alloc.h
../headers/../io_lib/hash_table.h
../headers/../io_lib/os.h
../headers/../io_lib/array.h
../headers/../io_lib/mFILE.h
../headers/../io_lib/deflate_interlaced.h
../headers/../io_lib/ztr.h
../headers/../io_lib/srf.h
../headers//usr/include/stdlib.h
../headers//usr/include/unistd.h
libraries
../libs/lib/powerpc64le-linux-gnu/libm.so.6
../libs/lib/powerpc64le-linux-gnu/libpthread.so.0
../libs/lib/powerpc64le-linux-gnu/libbz2.so.1.0
../libs/lib/powerpc64le-linux-gnu/libc.so.6
manual
scramble
compile units
scramble.c
Gimple
./scramble.c.004t.gimple
GKD
./scramble.o.gkd
OBJ
obj: ./scramble.o
includes
scramble.c
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/include/stdlib.h
../headers//usr/include/powerpc64le-linux-gnu/bits/string3.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//usr/include/powerpc64le-linux-gnu/sys/types.h
../headers//usr/include/powerpc64le-linux-gnu/bits/pthreadtypes.h
../headers//usr/include/stdint.h
../headers//usr/include/powerpc64le-linux-gnu/zconf.h
../headers//usr/include/zlib.h
../headers/../io_lib/pooled_alloc.h
../headers/../io_lib/hash_table.h
../headers/../io_lib/dstring.h
../headers/../io_lib/string_alloc.h
../headers/../io_lib/sam_header.h
../headers/../io_lib/thread_pool.h
../headers/../io_lib/bam.h
../headers/../io_lib/cram_structs.h
../headers/../io_lib/binning.h
../headers/../io_lib/cram_codecs.h
../headers/../io_lib/scram.h
../headers//usr/include/getopt.h
../headers//usr/include/string.h
../headers/../io_lib/cram_index.h
../headers/../io_lib/cram_io.h
libraries
../libs/lib/powerpc64le-linux-gnu/libm.so.6
../libs/lib/powerpc64le-linux-gnu/libpthread.so.0
../libs/lib/powerpc64le-linux-gnu/libbz2.so.1.0
../libs/lib/powerpc64le-linux-gnu/libc.so.6
manual
hash_list
compile units
hash_list.c
Gimple
./hash_list.c.004t.gimple
GKD
./hash_list.o.gkd
OBJ
obj: ./hash_list.o
includes
hash_list.c
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//usr/include/powerpc64le-linux-gnu/sys/types.h
../headers//usr/include/stdint.h
../headers/../io_lib/pooled_alloc.h
../headers/../io_lib/hash_table.h
libraries
../libs/lib/powerpc64le-linux-gnu/libm.so.6
../libs/lib/powerpc64le-linux-gnu/libpthread.so.0
../libs/lib/powerpc64le-linux-gnu/libbz2.so.1.0
../libs/lib/powerpc64le-linux-gnu/libc.so.6
manual
index_tar
compile units
index_tar.c
Gimple
./index_tar.c.004t.gimple
GKD
./index_tar.o.gkd
OBJ
obj: ./index_tar.o
includes
index_tar.c
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/include/powerpc64le-linux-gnu/bits/string3.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers/../io_lib/tar_format.h
../headers//usr/include/string.h
../headers//usr/include/stdlib.h
libraries
../libs/lib/powerpc64le-linux-gnu/libm.so.6
../libs/lib/powerpc64le-linux-gnu/libpthread.so.0
../libs/lib/powerpc64le-linux-gnu/libbz2.so.1.0
../libs/lib/powerpc64le-linux-gnu/libc.so.6
manual
extract_qual
compile units
extract_qual.c
Gimple
./extract_qual.c.004t.gimple
GKD
./extract_qual.o.gkd
OBJ
obj: ./extract_qual.o
includes
extract_qual.c
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers/../io_lib/os.h
../headers/../io_lib/mFILE.h
../headers/../io_lib/Read.h
../headers/../io_lib/array.h
../headers/../io_lib/expFileIO.h
../headers//usr/include/string.h
../headers/../io_lib/xalloc.h
../headers/../io_lib/open_trace_file.h
../headers//usr/include/stdlib.h
../headers/../io_lib/translate.h
libraries
../libs/lib/powerpc64le-linux-gnu/libm.so.6
../libs/lib/powerpc64le-linux-gnu/libpthread.so.0
../libs/lib/powerpc64le-linux-gnu/libbz2.so.1.0
../libs/lib/powerpc64le-linux-gnu/libc.so.6
manual
libstaden-read.so.1.5.1
compile units
Read.c
Gimple
./Read.c.004t.gimple
GKD
./Read.o.gkd
OBJ
obj: ./Read.o
scf_extras.c
Gimple
./scf_extras.c.004t.gimple
GKD
./scf_extras.o.gkd
OBJ
obj: ./scf_extras.o
translate.c
Gimple
./translate.c.004t.gimple
GKD
./translate.o.gkd
OBJ
obj: ./translate.o
compression.c
Gimple
./compression.c.004t.gimple
GKD
./compression.o.gkd
OBJ
obj: ./compression.o
ztr.c
Gimple
./ztr.c.004t.gimple
GKD
./ztr.o.gkd
OBJ
obj: ./ztr.o
ztr_translate.c
Gimple
./ztr_translate.c.004t.gimple
GKD
./ztr_translate.o.gkd
OBJ
obj: ./ztr_translate.o
deflate_interlaced.c
Gimple
./deflate_interlaced.c.004t.gimple
GKD
./deflate_interlaced.o.gkd
OBJ
obj: ./deflate_interlaced.o
fpoint.c
Gimple
./fpoint.c.004t.gimple
GKD
./fpoint.o.gkd
OBJ
obj: ./fpoint.o
seqIOABI.c
Gimple
./seqIOABI.c.004t.gimple
GKD
./seqIOABI.o.gkd
OBJ
obj: ./seqIOABI.o
seqIOALF.c
Gimple
./seqIOALF.c.004t.gimple
GKD
./seqIOALF.o.gkd
OBJ
obj: ./seqIOALF.o
expFileIO.c
Gimple
./expFileIO.c.004t.gimple
GKD
./expFileIO.o.gkd
OBJ
obj: ./expFileIO.o
seqIOPlain.c
Gimple
./seqIOPlain.c.004t.gimple
GKD
./seqIOPlain.o.gkd
OBJ
obj: ./seqIOPlain.o
misc_scf.c
Gimple
./misc_scf.c.004t.gimple
GKD
./misc_scf.o.gkd
OBJ
obj: ./misc_scf.o
read_scf.c
Gimple
./read_scf.c.004t.gimple
GKD
./read_scf.o.gkd
OBJ
obj: ./read_scf.o
write_scf.c
Gimple
./write_scf.c.004t.gimple
GKD
./write_scf.o.gkd
OBJ
obj: ./write_scf.o
sff.c
Gimple
./sff.c.004t.gimple
GKD
./sff.o.gkd
OBJ
obj: ./sff.o
srf.c
Gimple
./srf.c.004t.gimple
GKD
./srf.o.gkd
OBJ
obj: ./srf.o
array.c
Gimple
./array.c.004t.gimple
GKD
./array.o.gkd
OBJ
obj: ./array.o
compress.c
Gimple
./compress.c.004t.gimple
GKD
./compress.o.gkd
OBJ
obj: ./compress.o
error.c
Gimple
./error.c.004t.gimple
GKD
./error.o.gkd
OBJ
obj: ./error.o
files.c
Gimple
./files.c.004t.gimple
GKD
./files.o.gkd
OBJ
obj: ./files.o
find.c
Gimple
./find.c.004t.gimple
GKD
./find.o.gkd
OBJ
obj: ./find.o
mach-io.c
Gimple
./mach-io.c.004t.gimple
GKD
./mach-io.o.gkd
OBJ
obj: ./mach-io.o
open_trace_file.c
Gimple
./open_trace_file.c.004t.gimple
GKD
./open_trace_file.o.gkd
OBJ
obj: ./open_trace_file.o
read_alloc.c
Gimple
./read_alloc.c.004t.gimple
GKD
./read_alloc.o.gkd
OBJ
obj: ./read_alloc.o
strings.c
Gimple
./strings.c.004t.gimple
GKD
./strings.o.gkd
OBJ
obj: ./strings.o
traceType.c
Gimple
./traceType.c.004t.gimple
GKD
./traceType.o.gkd
OBJ
obj: ./traceType.o
xalloc.c
Gimple
./xalloc.c.004t.gimple
GKD
./xalloc.o.gkd
OBJ
obj: ./xalloc.o
vlen.c
Gimple
./vlen.c.004t.gimple
GKD
./vlen.o.gkd
OBJ
obj: ./vlen.o
hash_table.c
Gimple
./hash_table.c.004t.gimple
GKD
./hash_table.o.gkd
OBJ
obj: ./hash_table.o
jenkins_lookup3.c
Gimple
./jenkins_lookup3.c.004t.gimple
GKD
./jenkins_lookup3.o.gkd
OBJ
obj: ./jenkins_lookup3.o
mFILE.c
Gimple
./mFILE.c.004t.gimple
GKD
./mFILE.o.gkd
OBJ
obj: ./mFILE.o
pooled_alloc.c
Gimple
./pooled_alloc.c.004t.gimple
GKD
./pooled_alloc.o.gkd
OBJ
obj: ./pooled_alloc.o
bam.c
Gimple
./bam.c.004t.gimple
GKD
./bam.o.gkd
OBJ
obj: ./bam.o
sam_header.c
Gimple
./sam_header.c.004t.gimple
GKD
./sam_header.o.gkd
OBJ
obj: ./sam_header.o
arith_static.c
Gimple
./arith_static.c.004t.gimple
GKD
./arith_static.o.gkd
OBJ
obj: ./arith_static.o
rANS_static.c
Gimple
./rANS_static.c.004t.gimple
GKD
./rANS_static.o.gkd
OBJ
obj: ./rANS_static.o
cram_codecs.c
Gimple
./cram_codecs.c.004t.gimple
GKD
./cram_codecs.o.gkd
OBJ
obj: ./cram_codecs.o
cram_encode.c
Gimple
./cram_encode.c.004t.gimple
GKD
./cram_encode.o.gkd
OBJ
obj: ./cram_encode.o
cram_decode.c
Gimple
./cram_decode.c.004t.gimple
GKD
./cram_decode.o.gkd
OBJ
obj: ./cram_decode.o
cram_stats.c
Gimple
./cram_stats.c.004t.gimple
GKD
./cram_stats.o.gkd
OBJ
obj: ./cram_stats.o
cram_io.c
Gimple
./cram_io.c.004t.gimple
GKD
./cram_io.o.gkd
OBJ
obj: ./cram_io.o
cram_index.c
Gimple
./cram_index.c.004t.gimple
GKD
./cram_index.o.gkd
OBJ
obj: ./cram_index.o
zfio.c
Gimple
./zfio.c.004t.gimple
GKD
./zfio.o.gkd
OBJ
obj: ./zfio.o
dstring.c
Gimple
./dstring.c.004t.gimple
GKD
./dstring.o.gkd
OBJ
obj: ./dstring.o
string_alloc.c
Gimple
./string_alloc.c.004t.gimple
GKD
./string_alloc.o.gkd
OBJ
obj: ./string_alloc.o
md5.c
Gimple
./md5.c.004t.gimple
GKD
./md5.o.gkd
OBJ
obj: ./md5.o
scram.c
Gimple
./scram.c.004t.gimple
GKD
./scram.o.gkd
OBJ
obj: ./scram.o
thread_pool.c
Gimple
./thread_pool.c.004t.gimple
GKD
./thread_pool.o.gkd
OBJ
obj: ./thread_pool.o
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../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdint.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers/../io_lib/dstring.h
../headers/../io_lib/pooled_alloc.h
../headers/../io_lib/hash_table.h
../headers/../io_lib/string_alloc.h
../headers/../io_lib/sam_header.h
../headers//usr/include/string.h
arith_static.c
../headers//usr/include/powerpc64le-linux-gnu/bits/string3.h
../headers//usr/include/stdint.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/libio.h
../headers//usr/include/stdio.h
../headers//usr/include/stdlib.h
../headers//usr/include/assert.h
rANS_static.c
../headers//usr/include/powerpc64le-linux-gnu/bits/string3.h
../headers//usr/include/stdint.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/libio.h
../headers//usr/include/stdio.h
../headers//usr/include/stdlib.h
../headers//usr/include/assert.h
cram_codecs.c
../headers//usr/include/powerpc64le-linux-gnu/bits/string3.h
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/powerpc64le-linux-gnu/sys/types.h
../headers//usr/include/stdlib.h
../headers//usr/include/stdint.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers/../io_lib/pooled_alloc.h
../headers/../io_lib/hash_table.h
../headers/../io_lib/cram_structs.h
../headers/../io_lib/cram_codecs.h
../headers/../io_lib/binning.h
../headers/../io_lib/cram_io.h
../headers//usr/include/string.h
../headers//usr/include/assert.h
../headers/../io_lib/os.h
cram_encode.c
../headers//usr/include/powerpc64le-linux-gnu/bits/string3.h
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//usr/include/powerpc64le-linux-gnu/sys/types.h
../headers//usr/include/powerpc64le-linux-gnu/bits/pthreadtypes.h
../headers//usr/include/stdint.h
../headers/../io_lib/dstring.h
../headers/../io_lib/pooled_alloc.h
../headers/../io_lib/hash_table.h
../headers/../io_lib/string_alloc.h
../headers/../io_lib/sam_header.h
../headers/../io_lib/thread_pool.h
../headers/../io_lib/bam.h
../headers/../io_lib/binning.h
../headers/../io_lib/cram_structs.h
../headers/../io_lib/cram_codecs.h
../headers/../io_lib/md5.h
../headers//usr/include/stdlib.h
../headers/../io_lib/cram_stats.h
../headers//usr/include/assert.h
../headers/../io_lib/cram_io.h
../headers//usr/include/pthread.h
../headers/../io_lib/os.h
cram_decode.c
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/include/powerpc64le-linux-gnu/bits/string3.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//usr/include/powerpc64le-linux-gnu/sys/types.h
../headers//usr/include/powerpc64le-linux-gnu/bits/pthreadtypes.h
../headers//usr/include/stdint.h
../headers/../io_lib/dstring.h
../headers/../io_lib/pooled_alloc.h
../headers/../io_lib/hash_table.h
../headers/../io_lib/string_alloc.h
../headers/../io_lib/sam_header.h
../headers/../io_lib/thread_pool.h
../headers/../io_lib/bam.h
../headers/../io_lib/binning.h
../headers/../io_lib/cram_structs.h
../headers/../io_lib/cram_codecs.h
../headers/../io_lib/md5.h
../headers/../io_lib/cram_io.h
../headers//usr/include/stdlib.h
../headers//usr/include/string.h
../headers//usr/include/pthread.h
../headers//usr/include/assert.h
../headers/../io_lib/cram_index.h
../headers/../io_lib/os.h
cram_stats.c
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//usr/include/powerpc64le-linux-gnu/sys/types.h
../headers//usr/include/powerpc64le-linux-gnu/bits/pthreadtypes.h
../headers//usr/include/stdint.h
../headers/../io_lib/dstring.h
../headers/../io_lib/pooled_alloc.h
../headers/../io_lib/hash_table.h
../headers/../io_lib/string_alloc.h
../headers/../io_lib/sam_header.h
../headers/../io_lib/thread_pool.h
../headers/../io_lib/bam.h
../headers/../io_lib/cram_structs.h
../headers/../io_lib/binning.h
../headers/../io_lib/cram_codecs.h
../headers//usr/include/stdlib.h
../headers//usr/include/assert.h
../headers//usr/include/powerpc64le-linux-gnu/bits/mathcalls.h
cram_io.c
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/include/powerpc64le-linux-gnu/bits/string3.h
../headers//usr/include/powerpc64le-linux-gnu/sys/stat.h
../headers//usr/include/powerpc64le-linux-gnu/bits/unistd.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stdarg.h
../headers//usr/include/powerpc64le-linux-gnu/sys/types.h
../headers//usr/include/time.h
../headers//usr/include/powerpc64le-linux-gnu/bits/pthreadtypes.h
../headers//usr/include/powerpc64le-linux-gnu/zconf.h
../headers//usr/include/zlib.h
../headers//usr/include/powerpc64le-linux-gnu/bits/stat.h
../headers//usr/include/stdint.h
../headers/../io_lib/dstring.h
../headers/../io_lib/pooled_alloc.h
../headers/../io_lib/hash_table.h
../headers/../io_lib/string_alloc.h
../headers/../io_lib/sam_header.h
../headers/../io_lib/thread_pool.h
../headers/../io_lib/bam.h
../headers/../io_lib/cram_structs.h
../headers/../io_lib/binning.h
../headers/../io_lib/cram_codecs.h
../headers/../io_lib/md5.h
../headers/../io_lib/mFILE.h
../headers//usr/include/stdlib.h
../headers/../io_lib/rANS_static.h
../headers//usr/include/bzlib.h
../headers/../io_lib/arith_static.h
../headers//usr/include/string.h
../headers/../io_lib/cram_encode.h
../headers//usr/include/assert.h
../headers//usr/include/pthread.h
../headers//usr/include/unistd.h
../headers//usr/include/powerpc64le-linux-gnu/bits/errno.h
../headers//usr/include/ctype.h
../headers/../io_lib/misc.h
../headers/../io_lib/open_trace_file.h
../headers/../io_lib/cram_stats.h
../headers/../io_lib/cram_decode.h
../headers//usr/include/powerpc64le-linux-gnu/bits/string2.h
../headers/../io_lib/cram_index.h
../headers/../io_lib/os.h
cram_index.c
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/include/powerpc64le-linux-gnu/bits/string3.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//usr/include/powerpc64le-linux-gnu/sys/types.h
../headers//usr/include/powerpc64le-linux-gnu/bits/pthreadtypes.h
../headers//usr/include/zlib.h
../headers//usr/include/stdint.h
../headers/../io_lib/dstring.h
../headers/../io_lib/pooled_alloc.h
../headers/../io_lib/hash_table.h
../headers/../io_lib/string_alloc.h
../headers/../io_lib/sam_header.h
../headers/../io_lib/thread_pool.h
../headers/../io_lib/bam.h
../headers/../io_lib/cram_structs.h
../headers/../io_lib/binning.h
../headers/../io_lib/cram_codecs.h
../headers/../io_lib/zfio.h
../headers//usr/include/stdlib.h
../headers/../io_lib/cram_io.h
../headers/../io_lib/cram_decode.h
../headers//usr/include/assert.h
../headers//usr/include/string.h
zfio.c
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/powerpc64le-linux-gnu/sys/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//usr/include/zlib.h
../headers/../io_lib/zfio.h
../headers//usr/include/stdlib.h
dstring.c
../headers//usr/include/powerpc64le-linux-gnu/bits/string3.h
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stdarg.h
../headers//usr/include/libio.h
../headers/../io_lib/dstring.h
../headers//usr/include/stdio.h
../headers//usr/include/powerpc64le-linux-gnu/bits/mathcalls.h
../headers//usr/include/stdlib.h
../headers//usr/include/string.h
../headers/../io_lib/vlen.h
../headers//usr/include/ctype.h
../headers//usr/include/powerpc64le-linux-gnu/bits/errno.h
../headers/../io_lib/os.h
string_alloc.c
../headers//usr/include/powerpc64le-linux-gnu/bits/string3.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/libio.h
./string_alloc.h
../headers//usr/include/stdio.h
../headers//usr/include/stdlib.h
../headers//usr/include/string.h
md5.c
../headers//usr/include/powerpc64le-linux-gnu/bits/string3.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
./md5.h
scram.c
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/include/powerpc64le-linux-gnu/bits/string3.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/stdint.h
../headers//usr/include/powerpc64le-linux-gnu/zconf.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/powerpc64le-linux-gnu/sys/types.h
../headers//usr/include/powerpc64le-linux-gnu/bits/pthreadtypes.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stdarg.h
../headers//usr/include/zlib.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers/../io_lib/pooled_alloc.h
../headers/../io_lib/hash_table.h
../headers/../io_lib/dstring.h
../headers/../io_lib/string_alloc.h
../headers/../io_lib/sam_header.h
../headers/../io_lib/thread_pool.h
../headers/../io_lib/bam.h
../headers/../io_lib/binning.h
../headers/../io_lib/cram_structs.h
../headers/../io_lib/cram_codecs.h
../headers/../io_lib/scram.h
../headers//usr/include/stdlib.h
../headers//usr/include/string.h
../headers/../io_lib/cram_io.h
../headers//usr/include/assert.h
../headers/../io_lib/cram_decode.h
../headers/../io_lib/cram_encode.h
thread_pool.c
../headers//usr/include/powerpc64le-linux-gnu/bits/string3.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/time.h
../headers//usr/include/powerpc64le-linux-gnu/bits/time.h
../headers//usr/include/powerpc64le-linux-gnu/bits/pthreadtypes.h
../headers//usr/include/libio.h
../headers//usr/include/powerpc64le-linux-gnu/sys/time.h
../headers/../io_lib/thread_pool.h
../headers//usr/include/stdio.h
../headers//usr/include/pthread.h
../headers//usr/include/stdlib.h
../headers//usr/include/powerpc64le-linux-gnu/bits/sigthread.h
../headers//usr/include/powerpc64le-linux-gnu/bits/errno.h
libraries
../libs/lib/powerpc64le-linux-gnu/libz.so.1
../libs/lib/powerpc64le-linux-gnu/libm.so.6
../libs/lib/powerpc64le-linux-gnu/libpthread.so.0
../libs/lib/powerpc64le-linux-gnu/libbz2.so.1.0
../libs/lib/powerpc64le-linux-gnu/libc.so.6
manual
srf_info
compile units
srf_info.c
Gimple
./srf_info.c.004t.gimple
GKD
./srf_info.o.gkd
OBJ
obj: ./srf_info.o
includes
srf_info.c
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/include/powerpc64le-linux-gnu/bits/string3.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//usr/include/powerpc64le-linux-gnu/sys/types.h
../headers//usr/include/stdint.h
../headers/../io_lib/os.h
../headers/../io_lib/mFILE.h
../headers/../io_lib/deflate_interlaced.h
../headers/../io_lib/ztr.h
../headers/../io_lib/pooled_alloc.h
../headers/../io_lib/hash_table.h
../headers/../io_lib/srf.h
../headers//usr/include/getopt.h
../headers//usr/include/string.h
../headers//usr/include/stdlib.h
../headers//usr/include/powerpc64le-linux-gnu/bits/string2.h
../headers/../io_lib/xalloc.h
libraries
../libs/lib/powerpc64le-linux-gnu/libm.so.6
../libs/lib/powerpc64le-linux-gnu/libpthread.so.0
../libs/lib/powerpc64le-linux-gnu/libbz2.so.1.0
../libs/lib/powerpc64le-linux-gnu/libc.so.6
manual
scf_info
compile units
scf_info.c
Gimple
./scf_info.c.004t.gimple
GKD
./scf_info.o.gkd
OBJ
obj: ./scf_info.o
includes
scf_info.c
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers/../io_lib/os.h
../headers/../io_lib/scf.h
libraries
../libs/lib/powerpc64le-linux-gnu/libm.so.6
../libs/lib/powerpc64le-linux-gnu/libpthread.so.0
../libs/lib/powerpc64le-linux-gnu/libbz2.so.1.0
../libs/lib/powerpc64le-linux-gnu/libc.so.6
manual
scram_merge
compile units
scram_merge.c
Gimple
./scram_merge.c.004t.gimple
GKD
./scram_merge.o.gkd
OBJ
obj: ./scram_merge.o
includes
scram_merge.c
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/include/stdlib.h
../headers//usr/include/powerpc64le-linux-gnu/bits/string3.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//usr/include/powerpc64le-linux-gnu/sys/types.h
../headers//usr/include/powerpc64le-linux-gnu/bits/pthreadtypes.h
../headers//usr/include/stdint.h
../headers//usr/include/powerpc64le-linux-gnu/zconf.h
../headers//usr/include/zlib.h
../headers/../io_lib/pooled_alloc.h
../headers/../io_lib/hash_table.h
../headers/../io_lib/dstring.h
../headers/../io_lib/string_alloc.h
../headers/../io_lib/sam_header.h
../headers/../io_lib/thread_pool.h
../headers/../io_lib/bam.h
../headers/../io_lib/cram_structs.h
../headers/../io_lib/binning.h
../headers/../io_lib/cram_codecs.h
../headers/../io_lib/scram.h
../headers//usr/include/getopt.h
../headers//usr/include/string.h
../headers/../io_lib/cram_io.h
libraries
../libs/lib/powerpc64le-linux-gnu/libm.so.6
../libs/lib/powerpc64le-linux-gnu/libpthread.so.0
../libs/lib/powerpc64le-linux-gnu/libbz2.so.1.0
../libs/lib/powerpc64le-linux-gnu/libc.so.6
manual
convert_trace
compile units
convert_trace.c
Gimple
./convert_trace.c.004t.gimple
GKD
./convert_trace.o.gkd
OBJ
obj: ./convert_trace.o
includes
convert_trace.c
../headers//usr/include/powerpc64le-linux-gnu/bits/string3.h
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/include/stdlib.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//usr/include/powerpc64le-linux-gnu/sys/types.h
../headers/../io_lib/os.h
../headers/../io_lib/mFILE.h
../headers/../io_lib/Read.h
../headers//usr/include/powerpc64le-linux-gnu/bits/string2.h
../headers/../io_lib/compress.h
../headers//usr/include/unistd.h
../headers//usr/include/fcntl.h
../headers//usr/include/string.h
../headers/../io_lib/open_trace_file.h
../headers/../io_lib/seqIOABI.h
../headers/../io_lib/traceType.h
libraries
../libs/lib/powerpc64le-linux-gnu/libm.so.6
../libs/lib/powerpc64le-linux-gnu/libpthread.so.0
../libs/lib/powerpc64le-linux-gnu/libbz2.so.1.0
../libs/lib/powerpc64le-linux-gnu/libc.so.6
manual
append_sff
compile units
append_sff.c
Gimple
./append_sff.c.004t.gimple
GKD
./append_sff.o.gkd
OBJ
obj: ./append_sff.o
includes
append_sff.c
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//usr/include/stdint.h
../headers/../io_lib/sff.h
../headers//usr/include/stdlib.h
libraries
../libs/lib/powerpc64le-linux-gnu/libm.so.6
../libs/lib/powerpc64le-linux-gnu/libpthread.so.0
../libs/lib/powerpc64le-linux-gnu/libbz2.so.1.0
../libs/lib/powerpc64le-linux-gnu/libc.so.6
manual
hash_tar
compile units
hash_tar.c
Gimple
./hash_tar.c.004t.gimple
GKD
./hash_tar.o.gkd
OBJ
obj: ./hash_tar.o
includes
hash_tar.c
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/include/powerpc64le-linux-gnu/bits/string3.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//usr/include/powerpc64le-linux-gnu/sys/types.h
../headers/../io_lib/tar_format.h
../headers//usr/include/stdint.h
../headers/../io_lib/pooled_alloc.h
../headers/../io_lib/hash_table.h
../headers//usr/include/powerpc64le-linux-gnu/bits/string2.h
../headers//usr/include/string.h
../headers//usr/include/stdlib.h
../headers//usr/include/ctype.h
libraries
../libs/lib/powerpc64le-linux-gnu/libm.so.6
../libs/lib/powerpc64le-linux-gnu/libpthread.so.0
../libs/lib/powerpc64le-linux-gnu/libbz2.so.1.0
../libs/lib/powerpc64le-linux-gnu/libc.so.6
manual
hash_exp
compile units
hash_exp.c
Gimple
./hash_exp.c.004t.gimple
GKD
./hash_exp.o.gkd
OBJ
obj: ./hash_exp.o
includes
hash_exp.c
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/include/powerpc64le-linux-gnu/bits/string3.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//usr/include/powerpc64le-linux-gnu/sys/types.h
../headers//usr/include/stdint.h
../headers/../io_lib/pooled_alloc.h
../headers/../io_lib/hash_table.h
../headers//usr/include/stdlib.h
../headers//usr/include/string.h
libraries
../libs/lib/powerpc64le-linux-gnu/libm.so.6
../libs/lib/powerpc64le-linux-gnu/libpthread.so.0
../libs/lib/powerpc64le-linux-gnu/libbz2.so.1.0
../libs/lib/powerpc64le-linux-gnu/libc.so.6
manual
srf_list
compile units
srf_list.c
Gimple
./srf_list.c.004t.gimple
GKD
./srf_list.o.gkd
OBJ
obj: ./srf_list.o
includes
srf_list.c
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//usr/include/powerpc64le-linux-gnu/sys/types.h
../headers//usr/include/stdint.h
../headers/../io_lib/os.h
../headers/../io_lib/mFILE.h
../headers/../io_lib/deflate_interlaced.h
../headers/../io_lib/ztr.h
../headers/../io_lib/srf.h
../headers//usr/include/getopt.h
../headers//usr/include/stdlib.h
libraries
../libs/lib/powerpc64le-linux-gnu/libm.so.6
../libs/lib/powerpc64le-linux-gnu/libpthread.so.0
../libs/lib/powerpc64le-linux-gnu/libbz2.so.1.0
../libs/lib/powerpc64le-linux-gnu/libc.so.6
manual
scf_update
compile units
scf_update.c
Gimple
./scf_update.c.004t.gimple
GKD
./scf_update.o.gkd
OBJ
obj: ./scf_update.o
includes
scf_update.c
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/include/stdlib.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers/../io_lib/os.h
../headers/../io_lib/scf.h
libraries
../libs/lib/powerpc64le-linux-gnu/libm.so.6
../libs/lib/powerpc64le-linux-gnu/libpthread.so.0
../libs/lib/powerpc64le-linux-gnu/libbz2.so.1.0
../libs/lib/powerpc64le-linux-gnu/libc.so.6
manual
scf_dump
compile units
scf_dump.c
Gimple
./scf_dump.c.004t.gimple
GKD
./scf_dump.o.gkd
OBJ
obj: ./scf_dump.o
includes
scf_dump.c
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers/../io_lib/os.h
../headers/../io_lib/scf.h
libraries
../libs/lib/powerpc64le-linux-gnu/libm.so.6
../libs/lib/powerpc64le-linux-gnu/libpthread.so.0
../libs/lib/powerpc64le-linux-gnu/libbz2.so.1.0
../libs/lib/powerpc64le-linux-gnu/libc.so.6
manual
scram_pileup
compile units
scram_pileup.c
Gimple
./scram_pileup.c.004t.gimple
GKD
./scram_pileup.o.gkd
OBJ
obj: ./scram_pileup.o
includes
scram_pileup.c
../headers//usr/include/powerpc64le-linux-gnu/bits/string3.h
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//usr/include/powerpc64le-linux-gnu/sys/types.h
../headers//usr/include/powerpc64le-linux-gnu/bits/pthreadtypes.h
../headers//usr/include/stdint.h
../headers//usr/include/powerpc64le-linux-gnu/zconf.h
../headers//usr/include/zlib.h
../headers/../io_lib/pooled_alloc.h
../headers/../io_lib/hash_table.h
../headers/../io_lib/dstring.h
../headers/../io_lib/string_alloc.h
../headers/../io_lib/sam_header.h
../headers/../io_lib/thread_pool.h
../headers/../io_lib/bam.h
../headers/../io_lib/binning.h
../headers/../io_lib/cram_structs.h
../headers/../io_lib/cram_codecs.h
../headers/../io_lib/scram.h
./scram_pileup.h
../headers//usr/include/stdlib.h
../headers//usr/include/string.h
../headers//usr/include/ctype.h
../headers/../io_lib/os.h
libraries
../libs/lib/powerpc64le-linux-gnu/libm.so.6
../libs/lib/powerpc64le-linux-gnu/libpthread.so.0
../libs/lib/powerpc64le-linux-gnu/libbz2.so.1.0
../libs/lib/powerpc64le-linux-gnu/libc.so.6
manual
hash_extract
compile units
hash_extract.c
Gimple
./hash_extract.c.004t.gimple
GKD
./hash_extract.o.gkd
OBJ
obj: ./hash_extract.o
includes
hash_extract.c
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//usr/include/powerpc64le-linux-gnu/sys/types.h
../headers//usr/include/stdint.h
../headers/../io_lib/pooled_alloc.h
../headers/../io_lib/hash_table.h
../headers//usr/include/stdlib.h
libraries
../libs/lib/powerpc64le-linux-gnu/libm.so.6
../libs/lib/powerpc64le-linux-gnu/libpthread.so.0
../libs/lib/powerpc64le-linux-gnu/libbz2.so.1.0
../libs/lib/powerpc64le-linux-gnu/libc.so.6
manual
srf2fasta
compile units
srf2fasta.c
Gimple
./srf2fasta.c.004t.gimple
GKD
./srf2fasta.o.gkd
OBJ
obj: ./srf2fasta.o
includes
srf2fasta.c
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//usr/include/stdint.h
../headers/../io_lib/os.h
../headers/../io_lib/mFILE.h
../headers/../io_lib/deflate_interlaced.h
../headers/../io_lib/ztr.h
../headers/../io_lib/srf.h
../headers//usr/include/stdlib.h
../headers/../io_lib/Read.h
libraries
../libs/lib/powerpc64le-linux-gnu/libm.so.6
../libs/lib/powerpc64le-linux-gnu/libpthread.so.0
../libs/lib/powerpc64le-linux-gnu/libbz2.so.1.0
../libs/lib/powerpc64le-linux-gnu/libc.so.6
manual
get_comment
compile units
get_comment.c
Gimple
./get_comment.c.004t.gimple
GKD
./get_comment.o.gkd
OBJ
obj: ./get_comment.o
includes
get_comment.c
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers/../io_lib/os.h
../headers/../io_lib/Read.h
../headers//usr/include/stdlib.h
../headers//usr/include/string.h
libraries
../libs/lib/powerpc64le-linux-gnu/libm.so.6
../libs/lib/powerpc64le-linux-gnu/libpthread.so.0
../libs/lib/powerpc64le-linux-gnu/libbz2.so.1.0
../libs/lib/powerpc64le-linux-gnu/libc.so.6
manual
srf2fastq
compile units
srf2fastq.c
Gimple
./srf2fastq.c.004t.gimple
GKD
./srf2fastq.o.gkd
OBJ
obj: ./srf2fastq.o
includes
srf2fastq.c
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/include/powerpc64le-linux-gnu/bits/string3.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//usr/include/stdint.h
../headers/../io_lib/os.h
../headers/../io_lib/mFILE.h
../headers/../io_lib/deflate_interlaced.h
../headers/../io_lib/ztr.h
../headers/../io_lib/pooled_alloc.h
../headers/../io_lib/hash_table.h
../headers/../io_lib/srf.h
../headers//usr/include/powerpc64le-linux-gnu/bits/mathcalls.h
../headers//usr/include/string.h
../headers//usr/include/stdlib.h
../headers//usr/include/powerpc64le-linux-gnu/bits/string2.h
../headers/../io_lib/Read.h
libraries
../libs/lib/powerpc64le-linux-gnu/libm.so.6
../libs/lib/powerpc64le-linux-gnu/libpthread.so.0
../libs/lib/powerpc64le-linux-gnu/libbz2.so.1.0
../libs/lib/powerpc64le-linux-gnu/libc.so.6
manual
ztr_dump
compile units
ztr_dump.c
Gimple
./ztr_dump.c.004t.gimple
GKD
./ztr_dump.o.gkd
OBJ
obj: ./ztr_dump.o
includes
ztr_dump.c
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers/../io_lib/os.h
../headers/../io_lib/mFILE.h
../headers/../io_lib/deflate_interlaced.h
../headers/../io_lib/ztr.h
../headers/../io_lib/compression.h
../headers/../io_lib/xalloc.h
../headers//usr/include/powerpc64le-linux-gnu/bits/mathcalls.h
libraries
../libs/lib/powerpc64le-linux-gnu/libm.so.6
../libs/lib/powerpc64le-linux-gnu/libpthread.so.0
../libs/lib/powerpc64le-linux-gnu/libbz2.so.1.0
../libs/lib/powerpc64le-linux-gnu/libc.so.6
manual
srf_filter
compile units
srf_filter.c
Gimple
./srf_filter.c.004t.gimple
GKD
./srf_filter.o.gkd
OBJ
obj: ./srf_filter.o
includes
srf_filter.c
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/include/powerpc64le-linux-gnu/bits/string3.h
../headers//usr/include/stdlib.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//usr/include/powerpc64le-linux-gnu/sys/types.h
../headers//usr/include/stdint.h
../headers/../io_lib/os.h
../headers/../io_lib/mFILE.h
../headers/../io_lib/deflate_interlaced.h
../headers/../io_lib/ztr.h
../headers/../io_lib/pooled_alloc.h
../headers/../io_lib/hash_table.h
../headers/../io_lib/srf.h
../headers//usr/include/getopt.h
../headers//usr/include/string.h
../headers/../io_lib/xalloc.h
../headers//usr/include/powerpc64le-linux-gnu/bits/errno.h
libraries
../libs/lib/powerpc64le-linux-gnu/libm.so.6
../libs/lib/powerpc64le-linux-gnu/libpthread.so.0
../libs/lib/powerpc64le-linux-gnu/libbz2.so.1.0
../libs/lib/powerpc64le-linux-gnu/libc.so.6
manual
trace_dump
compile units
trace_dump.c
Gimple
./trace_dump.c.004t.gimple
GKD
./trace_dump.o.gkd
OBJ
obj: ./trace_dump.o
includes
trace_dump.c
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers/../io_lib/os.h
../headers/../io_lib/Read.h
libraries
../libs/lib/powerpc64le-linux-gnu/libm.so.6
../libs/lib/powerpc64le-linux-gnu/libpthread.so.0
../libs/lib/powerpc64le-linux-gnu/libbz2.so.1.0
../libs/lib/powerpc64le-linux-gnu/libc.so.6
manual
hash_sff
compile units
hash_sff.c
Gimple
./hash_sff.c.004t.gimple
GKD
./hash_sff.o.gkd
OBJ
obj: ./hash_sff.o
includes
hash_sff.c
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//usr/include/powerpc64le-linux-gnu/sys/types.h
../headers//usr/include/stdint.h
../headers/../io_lib/pooled_alloc.h
../headers/../io_lib/hash_table.h
../headers/../io_lib/sff.h
../headers//usr/include/stdlib.h
../headers//usr/include/powerpc64le-linux-gnu/bits/string2.h
libraries
../libs/lib/powerpc64le-linux-gnu/libm.so.6
../libs/lib/powerpc64le-linux-gnu/libpthread.so.0
../libs/lib/powerpc64le-linux-gnu/libbz2.so.1.0
../libs/lib/powerpc64le-linux-gnu/libc.so.6
manual
srf_dump_all
compile units
srf_dump_all.c
Gimple
./srf_dump_all.c.004t.gimple
GKD
./srf_dump_all.o.gkd
OBJ
obj: ./srf_dump_all.o
includes
srf_dump_all.c
../headers//usr/include/stdlib.h
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/include/powerpc64le-linux-gnu/bits/string3.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers//usr/include/powerpc64le-linux-gnu/sys/types.h
../headers//usr/include/stdint.h
../headers/../io_lib/os.h
../headers/../io_lib/mFILE.h
../headers/../io_lib/Read.h
../headers/../io_lib/deflate_interlaced.h
../headers/../io_lib/ztr.h
../headers/../io_lib/srf.h
../headers//usr/include/getopt.h
../headers//usr/include/string.h
../headers//usr/include/powerpc64le-linux-gnu/sys/stat.h
../headers//usr/include/unistd.h
../headers//usr/include/ctype.h
libraries
../libs/lib/powerpc64le-linux-gnu/libm.so.6
../libs/lib/powerpc64le-linux-gnu/libpthread.so.0
../libs/lib/powerpc64le-linux-gnu/libbz2.so.1.0
../libs/lib/powerpc64le-linux-gnu/libc.so.6
manual
extract_fastq
compile units
extract_fastq.c
Gimple
./extract_fastq.c.004t.gimple
GKD
./extract_fastq.o.gkd
OBJ
obj: ./extract_fastq.o
includes
extract_fastq.c
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers/../io_lib/os.h
../headers/../io_lib/mFILE.h
../headers/../io_lib/Read.h
../headers//usr/include/string.h
../headers/../io_lib/open_trace_file.h
../headers//usr/include/stdlib.h
libraries
../libs/lib/powerpc64le-linux-gnu/libm.so.6
../libs/lib/powerpc64le-linux-gnu/libpthread.so.0
../libs/lib/powerpc64le-linux-gnu/libbz2.so.1.0
../libs/lib/powerpc64le-linux-gnu/libc.so.6
manual
makeSCF
compile units
makeSCF.c
Gimple
./makeSCF.c.004t.gimple
GKD
./makeSCF.o.gkd
OBJ
obj: ./makeSCF.o
includes
makeSCF.c
../headers//usr/include/powerpc64le-linux-gnu/bits/string3.h
../headers//usr/include/powerpc64le-linux-gnu/bits/stdio2.h
../headers//usr/lib/gcc/powerpc64le-linux-gnu/4.9/include/stddef.h
../headers//usr/include/powerpc64le-linux-gnu/bits/types.h
../headers//usr/include/stdio.h
../headers//usr/include/libio.h
../headers/../io_lib/os.h
../headers/../io_lib/mFILE.h
../headers/../io_lib/scf.h
../headers/../io_lib/Read.h
../headers//usr/include/string.h
../headers/../io_lib/xalloc.h
../headers/../io_lib/traceType.h
../headers/../io_lib/compress.h
../headers//usr/include/stdlib.h
libraries
../libs/lib/powerpc64le-linux-gnu/libm.so.6
../libs/lib/powerpc64le-linux-gnu/libpthread.so.0
../libs/lib/powerpc64le-linux-gnu/libbz2.so.1.0
../libs/lib/powerpc64le-linux-gnu/libc.so.6
manual