mapsembler2 - amd64

Pool.cpp

Bank.cpp

Bloom.cpp

Hash16.cpp

unassigned

Terminator.cpp

Kmer.cpp

unassigned

Traversal.cpp

LinearCounter.cpp

Set.cpp

Utils.cpp

unassigned

SortingCount.cpp

unassigned

Debloom.cpp

OAHash.cpp

Kmer_for_kissnp2.cpp

Gimple

./Kmer_for_kissnp2.cpp.004t.gimple

GKD

./Kmer_for_kissnp2.o.gkd

OBJ

obj: ./Kmer_for_kissnp2.o

unassigned

Extension.cpp

Gimple

./Extension.cpp.004t.gimple

GKD

./Extension.o.gkd

OBJ

obj: ./Extension.o

unassigned

Extension_Bank.cpp

Gimple

./Extension_Bank.cpp.004t.gimple

GKD

./Extension_Bank.o.gkd

OBJ

obj: ./Extension_Bank.o

unassigned

Starter.cpp

Gimple

./Starter.cpp.004t.gimple

GKD

./Starter.o.gkd

OBJ

obj: ./Starter.o

commons.cpp

Gimple

./commons.cpp.004t.gimple

GKD

./commons.o.gkd

OBJ

obj: ./commons.o

libchash.cpp

couple.cpp

misc_tools.cpp

read_groups.cpp

consensus_common.cpp

list.cpp

read_coherence.cpp

interface_libchash.cpp

BooleanVector.cpp

Gimple

./BooleanVector.cpp.004t.gimple

GKD

./BooleanVector.o.gkd

OBJ

obj: ./BooleanVector.o

unassigned

Starter_Bank.cpp

Gimple

./Starter_Bank.cpp.004t.gimple

GKD

./Starter_Bank.o.gkd

OBJ

obj: ./Starter_Bank.o

unassigned

IterativeExtensions.cpp

Gimple

./IterativeExtensions.cpp.004t.gimple

GKD

./IterativeExtensions.o.gkd

OBJ

obj: ./IterativeExtensions.o

Fragment_Bank.cpp

Gimple

./Fragment_Bank.cpp.004t.gimple

GKD

./Fragment_Bank.o.gkd

OBJ

obj: ./Fragment_Bank.o

Fragment.cpp

Gimple

./Fragment.cpp.004t.gimple

GKD

./Fragment.o.gkd

OBJ

obj: ./Fragment.o

unassigned

GraphOutput.cpp

Gimple

./GraphOutput.cpp.004t.gimple

GKD

./GraphOutput.o.gkd

OBJ

obj: ./GraphOutput.o

unassigned

mapsembler.cpp

Gimple

./mapsembler.cpp.004t.gimple

GKD

./mapsembler.o.gkd

OBJ

obj: ./mapsembler.o

includes

Pool.cpp

../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/libio.h ../headers//usr/include/stdio.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/wchar.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/time.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/wctype.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers/../minia/Pool.h ../headers//usr/include/c++/4.9/new

Bank.cpp

../headers//usr/include/x86_64-linux-gnu/sys/stat.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/string3.h ../headers//usr/include/string.h ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/sys/types.h ../headers//usr/include/time.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/include/wchar.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/wctype.h ../headers//usr/include/x86_64-linux-gnu/bits/stat.h ../headers//usr/include/stdint.h ../headers/../minia/Kmer.h ../headers//usr/include/x86_64-linux-gnu/zconf.h ../headers//usr/include/zlib.h ../headers/../minia/Bank.h ../headers/../minia/lut.h ../headers//usr/include/ctype.h ../headers//usr/include/x86_64-linux-gnu/bits/errno.h ../headers//usr/include/c++/4.9/new ../headers//usr/include/x86_64-linux-gnu/bits/confname.h

Bloom.cpp

../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/string3.h ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/libio.h ../headers//usr/include/stdio.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/wchar.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/time.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/wctype.h ../headers//usr/include/stdint.h ../headers/../minia/Bloom.h ../headers//usr/include/stdlib.h

Hash16.cpp

../headers//usr/include/x86_64-linux-gnu/bits/string3.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/libio.h ../headers//usr/include/stdio.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/wchar.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/time.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/wctype.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/sys/types.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/stdint.h ../headers/../minia/Pool.h ../headers/../minia/Bloom.h ../headers/../minia/Bank.h ../headers/../minia/Hash16.h ../headers//usr/include/c++/4.9/new

unassigned

../headers/../minia/Terminator.h

Terminator.cpp

../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers/../minia/Set.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/libio.h ../headers//usr/include/stdio.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/wchar.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/bits/stl_construct.h ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/time.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/wctype.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/sys/types.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/stdint.h ../headers/../minia/Bloom.h ../headers/../minia/Kmer.h ../headers/../minia/Bank.h ../headers/../minia/Utils.h ../headers/../minia/Traversal.h ../headers//usr/include/x86_64-linux-gnu/bits/mathcalls.h ../headers//usr/include/c++/4.9/new

Kmer.cpp

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/libio.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/stdlib.h ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/stdint.h ../headers/../minia/Kmer.h ../headers//usr/include/stdio.h ../headers/../minia/lut.h ../headers//usr/include/c++/4.9/new

unassigned

../headers/../minia/Terminator.h ../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h

Traversal.cpp

../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/bits/stl_tree.h ../headers//usr/include/c++/4.9/bits/stl_deque.h ../headers/../minia/Traversal.h ../headers//usr/include/c++/4.9/bits/stl_set.h ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/bits/stl_uninitialized.h ../headers//usr/include/c++/4.9/bits/stl_construct.h ../headers//usr/include/c++/4.9/bits/deque.tcc ../headers//usr/include/c++/4.9/cmath ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/c++/4.9/bits/stl_queue.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/include/wchar.h ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/new ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/bits/stl_function.h ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/bits/move.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/time.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/stdint.h ../headers/../minia/Kmer.h ../headers/../minia/Bloom.h ../headers/../minia/Bank.h ../headers/../minia/Set.h ../headers/../minia/Utils.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/mathcalls.h

LinearCounter.cpp

../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/stdint.h ../headers//usr/include/libio.h ../headers/../minia/Bloom.h ../headers/../minia/LinearCounter.h ../headers//usr/include/stdio.h ../headers//usr/include/x86_64-linux-gnu/bits/mathcalls.h ../headers//usr/include/c++/4.9/new

Set.cpp

../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/c++/4.9/bits/stl_algo.h ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/c++/4.9/bits/move.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/bits/stl_heap.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/sys/types.h ../headers//usr/include/stdint.h ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/new ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/bits/stl_construct.h ../headers//usr/include/c++/4.9/bits/stl_uninitialized.h ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers/../minia/Pool.h ../headers/../minia/Bloom.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers/../minia/Kmer.h ../headers//usr/include/x86_64-linux-gnu/bits/confname.h ../headers/../minia/Bank.h ../headers/../minia/Hash16.h ../headers/../minia/Set.h ../headers//usr/include/x86_64-linux-gnu/bits/mathcalls.h

Utils.cpp

../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/include/wchar.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/sys/types.h ../headers//usr/include/x86_64-linux-gnu/bits/time.h ../headers//usr/include/time.h ../headers//usr/include/x86_64-linux-gnu/sys/time.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/stdint.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers/../minia/Kmer.h ../headers//usr/include/zlib.h ../headers/../minia/Bank.h ../headers/../minia/Bloom.h ../headers/../minia/Pool.h ../headers/../minia/Hash16.h ../headers/../minia/LinearCounter.h ../headers/../minia/Utils.h ../headers//usr/include/unistd.h ../headers//usr/include/c++/4.9/new ../headers//usr/include/x86_64-linux-gnu/bits/mathcalls.h

unassigned

../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/bits/stl_algo.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/bits/stl_heap.h ../headers//usr/include/c++/4.9/bits/move.h

SortingCount.cpp

../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/c++/4.9/cmath ../headers//usr/include/x86_64-linux-gnu/bits/unistd.h ../headers/../minia/Utils.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/include/wchar.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/sys/types.h ../headers//usr/include/x86_64-linux-gnu/bits/time.h ../headers//usr/include/time.h ../headers//usr/include/x86_64-linux-gnu/sys/time.h ../headers//usr/include/stdint.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/bits/stl_construct.h ../headers//usr/include/c++/4.9/bits/stl_uninitialized.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/x86_64-linux-gnu/bits/statvfs.h ../headers//usr/include/x86_64-linux-gnu/bits/dirent.h ../headers/../minia/Kmer.h ../headers//usr/include/zlib.h ../headers/../minia/Bank.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers/../minia/OAHash.h ../headers/../minia/SortingCount.h ../headers//usr/include/x86_64-linux-gnu/bits/resource.h ../headers//usr/include/x86_64-linux-gnu/sys/resource.h ../headers//usr/include/c++/4.9/new ../headers/../minia/Bloom.h ../headers//usr/include/x86_64-linux-gnu/sys/statvfs.h ../headers//usr/include/dirent.h ../headers//usr/include/x86_64-linux-gnu/sys/stat.h ../headers//usr/include/unistd.h

unassigned

../headers/../minia/Set.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h

Debloom.cpp

../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/c++/4.9/bits/stl_tree.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/bits/stl_deque.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/include/wchar.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/sys/types.h ../headers//usr/include/x86_64-linux-gnu/bits/time.h ../headers//usr/include/time.h ../headers//usr/include/x86_64-linux-gnu/sys/time.h ../headers//usr/include/stdint.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/bits/stl_queue.h ../headers//usr/include/c++/4.9/bits/deque.tcc ../headers//usr/include/c++/4.9/bits/stl_function.h ../headers//usr/include/c++/4.9/bits/stl_set.h ../headers//usr/include/c++/4.9/bits/move.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers/../minia/Kmer.h ../headers//usr/include/zlib.h ../headers/../minia/Bank.h ../headers/../minia/Bloom.h ../headers/../minia/Pool.h ../headers/../minia/Hash16.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/locale.h ../headers/../minia/Utils.h ../headers/../minia/Traversal.h ../headers/../minia/Terminator.h ../headers/../minia/Debloom.h ../headers//usr/include/unistd.h ../headers//usr/include/c++/4.9/new ../headers//usr/include/x86_64-linux-gnu/bits/mathcalls.h

OAHash.cpp

../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/libio.h ../headers//usr/include/stdio.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/wchar.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/time.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/wctype.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/sys/types.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/stdint.h ../headers/../minia/OAHash.h ../headers//usr/include/c++/4.9/new

Kmer_for_kissnp2.cpp

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/libio.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/stdlib.h ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/stdint.h ../headers/../minia/Kmer.h ../headers//usr/include/stdio.h ../headers/../minia/lut.h ../headers//usr/include/c++/4.9/new

unassigned

../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h

Extension.cpp

../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/libio.h ../headers//usr/include/stdio.h ../headers//usr/include/wchar.h ../headers//usr/include/stdlib.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers/../minia/Set.h ../headers//usr/include/time.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers/../minia/Utils.h ../headers/../minia/Traversal.h ../headers/../minia/Debloom.h ../headers/../minia/SortingCount.h ./IterativeExtensions.h ./Extension.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ../headers/../minia/Bloom.h ../headers//usr/include/c++/4.9/new

unassigned

../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h

Extension_Bank.cpp

../headers//usr/include/c++/4.9/bits/char_traits.h ./Extension.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/bits/stl_construct.h ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/bits/stl_uninitialized.h ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/bits/move.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/libio.h ../headers//usr/include/stdio.h ../headers//usr/include/wchar.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers/../minia/Set.h ../headers//usr/include/time.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers/../minia/Utils.h ../headers/../minia/Traversal.h ../headers/../minia/Debloom.h ../headers/../minia/SortingCount.h ./IterativeExtensions.h ../headers//usr/include/wctype.h ./Extension_Bank.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ../headers//usr/include/c++/4.9/new ../headers/../minia/Bloom.h

unassigned

../headers//usr/include/c++/4.9/bits/locale_facets.h ../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h

Starter.cpp

../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/ostream ../headers//usr/include/c++/4.9/bits/basic_ios.h ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/iostream ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/sys/types.h ../headers//usr/include/stdint.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/tr1/type_traits ../headers//usr/include/c++/4.9/tr1/functional_hash.h ../headers//usr/include/c++/4.9/tr1/hashtable_policy.h ../headers//usr/include/c++/4.9/new ../headers//usr/include/c++/4.9/tr1/tuple ../headers//usr/include/c++/4.9/tr1/functional ../headers//usr/include/c++/4.9/tr1/hashtable.h ../headers//usr/include/c++/4.9/tr1/unordered_map.h ../headers//usr/include/c++/4.9/bits/stl_function.h ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/bits/stl_tree.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/ostream.tcc ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/bits/postypes.h ./GraphOutput.h ../headers//usr/include/c++/4.9/bits/stl_set.h ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/bits/ostream_insert.h ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/include/wchar.h ../headers//usr/include/_G_config.h ../headers//usr/include/zlib.h ../headers/../minia/Bank.h ../headers/../minia/Set.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/time.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/wctype.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers/../minia/Utils.h ../headers/../minia/Traversal.h ../headers/../minia/Debloom.h ../headers/../minia/SortingCount.h ./IterativeExtensions.h ./Extension.h ./Extension_Bank.h ../headers/read_coherence_mapsembler/hash.h ./Fragment.h ./Starter.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ../headers/../minia/Bloom.h ../headers/../minia/Kmer.h ../headers//usr/include/string.h ./commons.h ../headers//usr/include/assert.h

commons.cpp

../headers//usr/include/x86_64-linux-gnu/bits/string3.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/ctype.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/include/stdint.h ../headers//usr/include/stdlib.h ../headers//usr/include/string.h ../headers/../minia/Kmer.h

libchash.cpp

../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/byteswap.h ../headers//usr/include/string.h ../headers//usr/include/x86_64-linux-gnu/bits/string3.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/sys/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers/read_coherence_mapsembler/libchash.h ../headers//usr/include/stdlib.h ../headers//usr/include/assert.h ../headers//usr/include/x86_64-linux-gnu/bits/socket.h

couple.cpp

../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers/read_coherence_mapsembler/couple.h ../headers//usr/include/stdlib.h ../headers//usr/include/string.h

misc_tools.cpp

../headers//usr/include/x86_64-linux-gnu/bits/string3.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers/read_coherence_mapsembler/list.h ../headers/read_coherence_mapsembler/couple.h ../headers//usr/include/string.h ../headers//usr/include/stdlib.h

read_groups.cpp

../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/ctype.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers/read_coherence_mapsembler/couple.h ../headers/read_coherence_mapsembler/list.h ../headers/read_coherence_mapsembler/hash.h ../headers/read_coherence_mapsembler/read_groups.h ../headers//usr/include/stdlib.h ../headers//usr/include/string.h ../headers//usr/include/assert.h ../headers//usr/include/x86_64-linux-gnu/bits/confname.h

consensus_common.cpp

../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/string3.h ../headers//usr/include/string.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/include/stdlib.h

list.cpp

../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers/read_coherence_mapsembler/list.h ../headers//usr/include/stdlib.h

read_coherence.cpp

../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/string.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers/read_coherence_mapsembler/list.h ../headers/read_coherence_mapsembler/couple.h ../headers/read_coherence_mapsembler/hash.h ../headers/read_coherence_mapsembler/read_groups.h ../headers/read_coherence_mapsembler/consensus_common.h ../headers//usr/include/stdlib.h ../headers//usr/include/assert.h ../headers//usr/include/x86_64-linux-gnu/bits/confname.h

interface_libchash.cpp

../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/include/stdint.h ../headers//usr/include/x86_64-linux-gnu/sys/types.h ../headers/read_coherence_mapsembler/libchash.h ../headers/read_coherence_mapsembler/list.h ../headers/read_coherence_mapsembler/couple.h ../headers/read_coherence_mapsembler/hash.h ../headers//usr/include/assert.h ../headers//usr/include/stdlib.h ../headers/read_coherence_mapsembler/../commons.h ../headers/read_coherence_mapsembler/misc_tools.h

BooleanVector.cpp

../headers//usr/include/x86_64-linux-gnu/bits/string3.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/libio.h ../headers//usr/include/stdio.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/wchar.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/time.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/wctype.h ./BooleanVector.h ../headers//usr/include/stdlib.h

unassigned

../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h

Starter_Bank.cpp

../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/bits/stl_tree.h ../headers//usr/include/c++/4.9/tr1/hashtable.h ../headers//usr/include/c++/4.9/bits/stl_set.h ./GraphOutput.h ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/tr1/unordered_map.h ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/libio.h ../headers//usr/include/stdio.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/wchar.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/stl_construct.h ../headers//usr/include/c++/4.9/bits/stl_uninitialized.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/tr1/type_traits ../headers//usr/include/c++/4.9/tr1/functional_hash.h ../headers//usr/include/c++/4.9/tr1/hashtable_policy.h ../headers//usr/include/c++/4.9/new ../headers//usr/include/c++/4.9/tr1/tuple ../headers//usr/include/c++/4.9/tr1/functional ../headers//usr/include/c++/4.9/bits/stl_function.h ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/bits/move.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/time.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/wctype.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/sys/types.h ../headers//usr/include/stdint.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/_G_config.h ../headers//usr/include/zlib.h ../headers/../minia/Bank.h ../headers/../minia/Set.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers/../minia/Utils.h ../headers/../minia/Traversal.h ../headers/../minia/Debloom.h ../headers/../minia/SortingCount.h ./IterativeExtensions.h ./Extension.h ./Extension_Bank.h ../headers/read_coherence_mapsembler/couple.h ../headers/read_coherence_mapsembler/hash.h ./Fragment.h ./Starter.h ./BooleanVector.h ./Fragment_Bank.h ./Starter_Bank.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ../headers/../minia/Bloom.h

unassigned

../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h

IterativeExtensions.cpp

../headers//usr/include/x86_64-linux-gnu/bits/string3.h ../headers/../minia/Traversal.h ../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/bits/stl_tree.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/bits/stl_set.h ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/bits/stl_uninitialized.h ../headers//usr/include/c++/4.9/bits/stl_construct.h ../headers//usr/include/string.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/include/wchar.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/bits/time.h ../headers//usr/include/time.h ../headers//usr/include/x86_64-linux-gnu/sys/time.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/bits/stl_function.h ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/bits/move.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/stdint.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers/../minia/Kmer.h ../headers/../minia/Bank.h ../headers/../minia/Bloom.h ../headers/../minia/Utils.h ../headers/../minia/Set.h ../headers/../minia/Terminator.h ../headers/../minia/Debloom.h ./IterativeExtensions.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ../headers//usr/include/c++/4.9/new

Fragment_Bank.cpp

../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/bits/stl_algo.h ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/libio.h ../headers//usr/include/stdio.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/wchar.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/new ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/stl_construct.h ../headers//usr/include/c++/4.9/bits/stl_uninitialized.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/tr1/type_traits ../headers//usr/include/c++/4.9/tr1/tuple ../headers//usr/include/c++/4.9/tr1/hashtable_policy.h ../headers//usr/include/c++/4.9/tr1/functional ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/time.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/wctype.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/sys/types.h ../headers//usr/include/stdint.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/_G_config.h ../headers//usr/include/zlib.h ../headers/../minia/Bank.h ../headers/../minia/Set.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ./GraphOutput.h ../headers/../minia/Utils.h ../headers/../minia/Traversal.h ../headers/../minia/Debloom.h ../headers/../minia/SortingCount.h ./IterativeExtensions.h ../headers/read_coherence_mapsembler/list.h ../headers/read_coherence_mapsembler/couple.h ../headers/read_coherence_mapsembler/hash.h ./Fragment.h ./BooleanVector.h ./Fragment_Bank.h ../headers/../minia/Bloom.h ./commons.h ../headers//usr/include/string.h ../headers//usr/include/ctype.h

Fragment.cpp

../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers/read_coherence_mapsembler/hash.h ./Fragment.h ../headers//usr/include/string.h ../headers//usr/include/stdlib.h

unassigned

../headers//usr/include/c++/4.9/bits/locale_facets.h ../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h ../headers//usr/include/c++/4.9/tr1/hashtable.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/bits/stl_algobase.h

GraphOutput.cpp

../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/c++/4.9/bits/basic_ios.h ../headers//usr/include/x86_64-linux-gnu/bits/string3.h ../headers//usr/include/c++/4.9/bits/stl_tree.h ./GraphOutput.h ../headers//usr/include/c++/4.9/bits/stl_set.h ../headers//usr/include/c++/4.9/tr1/hashtable_policy.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/tr1/type_traits ../headers//usr/include/c++/4.9/tr1/functional_hash.h ../headers//usr/include/c++/4.9/tr1/tuple ../headers//usr/include/c++/4.9/tr1/functional ../headers//usr/include/c++/4.9/tr1/unordered_map.h ../headers//usr/include/c++/4.9/bits/stl_function.h ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/istream ../headers//usr/include/c++/4.9/streambuf ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/fstream ../headers//usr/include/c++/4.9/bits/move.h ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/sys/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/include/wchar.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/time.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/wctype.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/regex.h ../headers//usr/include/stdint.h ../headers/../minia/Kmer.h ../headers//usr/include/x86_64-linux-gnu/bits/confname.h ../headers//usr/include/zlib.h ../headers/../minia/Bank.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ../headers//usr/include/c++/4.9/new ../headers//usr/include/stdlib.h ../headers//usr/include/string.h

unassigned

../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h

mapsembler.cpp

../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/string3.h ../headers//usr/include/stdlib.h ../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/c++/4.9/bits/stl_construct.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/iostream ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/include/wchar.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/sys/types.h ../headers//usr/include/x86_64-linux-gnu/bits/time.h ../headers//usr/include/time.h ../headers//usr/include/stdint.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/bits/stl_tree.h ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/bits/stl_function.h ../headers//usr/include/c++/4.9/tr1/type_traits ../headers//usr/include/c++/4.9/tr1/functional_hash.h ../headers//usr/include/c++/4.9/tr1/hashtable_policy.h ../headers//usr/include/c++/4.9/new ../headers//usr/include/c++/4.9/tr1/tuple ../headers//usr/include/c++/4.9/tr1/functional ../headers//usr/include/c++/4.9/tr1/hashtable.h ../headers//usr/include/c++/4.9/tr1/unordered_map.h ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/cstdio ./GraphOutput.h ../headers//usr/include/c++/4.9/bits/stl_set.h ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/bits/move.h ../headers//usr/include/c++/4.9/cmath ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers/../minia/Kmer.h ../headers//usr/include/zlib.h ../headers/../minia/Bank.h ../headers/../minia/Bloom.h ../headers/../minia/Set.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers/../minia/Utils.h ../headers/../minia/Traversal.h ../headers/../minia/Debloom.h ../headers/../minia/SortingCount.h ../headers//usr/include/wctype.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ./IterativeExtensions.h ./Extension.h ./Extension_Bank.h ../headers/read_coherence_mapsembler/couple.h ../headers/read_coherence_mapsembler/hash.h ./Fragment.h ./Starter.h ./BooleanVector.h ./Fragment_Bank.h ./Starter_Bank.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ../headers//usr/include/getopt.h ../headers/../minia/rvalues.h