jellyfish - amd64

unassigned

test_main.cc

unassigned

test_misc.cc

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test_offsets_key_value.cc

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test_simple_circular_buffer.cc

unassigned

test_rectangular_binary_matrix.cc

unassigned

test_mer_dna.cc

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test_large_hash_array.cc

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test_mer_overlap_sequence_parser.cc

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test_file_header.cc

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test_mer_iterator.cc

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test_hash_counter.cc

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test_mer_heap.cc

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test_stream_iterator.cc

unassigned

test_token_ring.cc

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test_text_dumper.cc

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test_dumpers.cc

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test_mapped_file.cc

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test_int128.cc

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test_mer_dna_bloom_counter.cc

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test_whole_sequence_parser.cc

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test_allocators_mmap.cc

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test_cooperative_pool2.cc

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test_generator_manager.cc

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test_atomic_bits_array.cc

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test_stdio_filebuf.cc

backtrace.cc

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gtest-all.cc

includes

unassigned

../headers//usr/include/c++/4.9/bits/locale_facets.h ../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h ./unit_tests/test_main_cmdline.hpp ../headers//usr/include/c++/4.9/ostream ../headers//usr/include/c++/4.9/bits/basic_ios.h ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/c++/4.9/streambuf ../headers//usr/include/c++/4.9/sstream

test_main.cc

./unit_tests/gtest/gtest.h ../headers//usr/include/c++/4.9/iostream ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdlib.h ../headers//usr/include/time.h ../headers//usr/include/x86_64-linux-gnu/sys/types.h ../headers//usr/include/x86_64-linux-gnu/bits/pthreadtypes.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/include/wchar.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/type_traits ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/new ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/ostream.tcc ../headers//usr/include/c++/4.9/istream ../headers//usr/include/c++/4.9/bits/postypes.h ../headers//usr/include/c++/4.9/limits ../headers//usr/include/c++/4.9/bits/uses_allocator.h ../headers//usr/include/c++/4.9/tuple ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/ctime ../headers//usr/include/c++/4.9/bits/shared_ptr_base.h ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/fstream ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/bits/ostream_insert.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/ext/concurrence.h ../headers//usr/include/stdint.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ../headers//usr/include/getopt.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ../headers//usr/include/x86_64-linux-gnu/bits/errno.h ../headers//usr/include/ctype.h ../headers//usr/include/string.h ./include/jellyfish/backtrace.hpp ../headers//usr/include/c++/4.9/cxxabi.h

unassigned

./unit_tests/gtest/gtest.h

test_misc.cc

../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/c++/4.9/sstream ../headers//usr/include/c++/4.9/streambuf ../headers//usr/include/c++/4.9/typeinfo ../headers//usr/include/string.h ../headers//usr/include/c++/4.9/bits/basic_ios.h ../headers//usr/include/c++/4.9/istream ../headers//usr/include/c++/4.9/ostream ./include/jellyfish/misc.hpp ./unit_tests/test_main.hpp ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/stdint.h ../headers//usr/include/c++/4.9/type_traits ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/new ../headers//usr/include/c++/4.9/cmath ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/random.h ../headers//usr/include/c++/4.9/bits/uses_allocator.h ../headers//usr/include/c++/4.9/tuple ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/ostream.tcc ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/ctime ../headers//usr/include/c++/4.9/bits/ptr_traits.h ../headers//usr/include/c++/4.9/bits/alloc_traits.h ../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/bits/stl_function.h ../headers//usr/include/c++/4.9/backward/binders.h ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/bits/move.h ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/c++/4.9/bits/ostream_insert.h ../headers//usr/include/c++/4.9/bits/postypes.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdlib.h ../headers//usr/include/time.h ../headers//usr/include/x86_64-linux-gnu/bits/pthreadtypes.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/x86_64-linux-gnu/bits/mathdef.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/include/wchar.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ../headers//usr/include/c++/4.9/cxxabi.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h

unassigned

../headers//usr/include/c++/4.9/bits/locale_facets.h ./unit_tests/gtest/gtest.h

test_offsets_key_value.cc

../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h ./include/jellyfish/divisor.hpp ../headers//usr/include/c++/4.9/ostream ../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/bits/stl_construct.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/sstream ../headers//usr/include/c++/4.9/streambuf ../headers//usr/include/c++/4.9/bits/char_traits.h ./include/jellyfish/offsets_key_value.hpp ../headers//usr/include/x86_64-linux-gnu/bits/string3.h ./include/jellyfish/misc.hpp ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/c++/4.9/bits/stl_uninitialized.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/typeinfo ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/bits/basic_ios.h ../headers//usr/include/c++/4.9/istream ../headers//usr/include/c++/4.9/tuple ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/type_traits ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/new ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/ostream.tcc ../headers//usr/include/c++/4.9/bits/uses_allocator.h ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/ctime ../headers//usr/include/c++/4.9/bits/ptr_traits.h ../headers//usr/include/c++/4.9/bits/alloc_traits.h ../headers//usr/include/c++/4.9/cmath ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/random.h ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/bits/move.h ../headers//usr/include/c++/4.9/bits/ostream_insert.h ../headers//usr/include/c++/4.9/bits/postypes.h ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/wchar.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/time.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/stdint.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/bits/pthreadtypes.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ../headers//usr/include/x86_64-linux-gnu/bits/mathdef.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ../headers//usr/include/assert.h ../headers//usr/include/pthread.h ../headers//usr/include/c++/4.9/cxxabi.h

unassigned

./unit_tests/gtest/gtest.h

test_simple_circular_buffer.cc

../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/c++/4.9/bits/basic_ios.h ../headers//usr/include/c++/4.9/istream ../headers//usr/include/c++/4.9/ostream ../headers//usr/include/c++/4.9/streambuf ../headers//usr/include/c++/4.9/sstream ./include/jellyfish/simple_circular_buffer.hpp ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/type_traits ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/new ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/ostream.tcc ../headers//usr/include/c++/4.9/bits/uses_allocator.h ../headers//usr/include/c++/4.9/tuple ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/ctime ../headers//usr/include/c++/4.9/bits/ptr_traits.h ../headers//usr/include/c++/4.9/bits/alloc_traits.h ../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/bits/shared_ptr_base.h ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/c++/4.9/bits/ostream_insert.h ../headers//usr/include/c++/4.9/bits/postypes.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/wchar.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/time.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/concurrence.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/stdint.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/bits/pthreadtypes.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ../headers//usr/include/c++/4.9/cxxabi.h

unassigned

../headers//usr/include/c++/4.9/bits/locale_facets.h ./unit_tests/gtest/gtest.h

test_rectangular_binary_matrix.cc

./include/jellyfish/rectangular_binary_matrix.hpp ./unit_tests/test_main.hpp ./include/jellyfish/misc.hpp ../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h ../headers//usr/include/c++/4.9/ostream ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/c++/4.9/bits/stl_uninitialized.h ../headers//usr/include/c++/4.9/bits/stl_construct.h ../headers//usr/include/c++/4.9/bits/move.h ../headers//usr/include/c++/4.9/sstream ../headers//usr/include/c++/4.9/streambuf ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/x86_64-linux-gnu/bits/string3.h ./include/jellyfish/mer_dna.hpp ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/typeinfo ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/bits/basic_ios.h ../headers//usr/include/c++/4.9/istream ../headers//usr/include/c++/4.9/tuple ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/c++/4.9/limits ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/c++/4.9/type_traits ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/new ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/ostream.tcc ../headers//usr/include/c++/4.9/bits/uses_allocator.h ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/ctime ../headers//usr/include/c++/4.9/bits/ptr_traits.h ../headers//usr/include/c++/4.9/bits/alloc_traits.h ../headers//usr/include/c++/4.9/cmath ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/random.h ../headers//usr/include/c++/4.9/cstring ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/bits/ostream_insert.h ../headers//usr/include/c++/4.9/bits/postypes.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/wchar.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/time.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/stdint.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/bits/pthreadtypes.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ../headers//usr/include/x86_64-linux-gnu/bits/mathdef.h ../headers//usr/include/string.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ./include/jellyfish/int128.hpp ../headers//usr/include/assert.h ../headers//usr/include/pthread.h ../headers//usr/include/c++/4.9/cxxabi.h

unassigned

../headers//usr/include/c++/4.9/bits/locale_facets.h ./unit_tests/gtest/gtest.h

test_mer_dna.cc

../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h ../headers//usr/include/string.h ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/c++/4.9/sstream ../headers//usr/include/c++/4.9/streambuf ./include/jellyfish/mer_dna.hpp ../headers//usr/include/x86_64-linux-gnu/bits/string3.h ../headers//usr/include/c++/4.9/ostream ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/bits/basic_ios.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ./include/jellyfish/int128.hpp ../headers//usr/include/c++/4.9/bits/stl_tree.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/c++/4.9/bits/stl_function.h ../headers//usr/include/c++/4.9/ext/aligned_buffer.h ../headers//usr/include/c++/4.9/tuple ../headers//usr/include/c++/4.9/bits/stl_map.h ../headers//usr/include/c++/4.9/istream ../headers//usr/include/c++/4.9/bits/move.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/include/wchar.h ../headers//usr/include/_G_config.h ../headers//usr/include/c++/4.9/type_traits ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/typeinfo ../headers//usr/include/c++/4.9/new ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/utility ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/postypes.h ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/bits/uses_allocator.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/ostream.tcc ../headers//usr/include/c++/4.9/limits ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/ctime ../headers//usr/include/c++/4.9/bits/ptr_traits.h ../headers//usr/include/c++/4.9/bits/alloc_traits.h ../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/cmath ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/random.h ../headers//usr/include/c++/4.9/cstring ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/c++/4.9/bits/ostream_insert.h ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/time.h ../headers//usr/include/stdint.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/bits/pthreadtypes.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ../headers//usr/include/c++/4.9/cxxabi.h ../headers//usr/include/x86_64-linux-gnu/bits/mathdef.h ./include/jellyfish/misc.hpp ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ./unit_tests/test_main.hpp ../headers//usr/include/ctype.h

unassigned

../headers//usr/include/c++/4.9/bits/locale_facets.h ./unit_tests/gtest/gtest.h

test_large_hash_array.cc

../headers//usr/include/c++/4.9/bits/move.h ./include/jellyfish/misc.hpp ./include/jellyfish/large_hash_array.hpp ../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h ./include/jellyfish/atomic_gcc.hpp ./include/jellyfish/divisor.hpp ./include/jellyfish/rectangular_binary_matrix.hpp ./include/jellyfish/allocators_mmap.hpp ../headers//usr/include/c++/4.9/ostream ../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/bits/stl_construct.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/c++/4.9/bits/stl_uninitialized.h ./include/jellyfish/mer_dna.hpp ../headers//usr/include/c++/4.9/sstream ../headers//usr/include/c++/4.9/streambuf ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/x86_64-linux-gnu/bits/string3.h ./include/jellyfish/large_hash_iterator.hpp ../headers//usr/include/c++/4.9/bits/stl_tree.h ../headers//usr/include/c++/4.9/bits/unique_ptr.h ../headers//usr/include/c++/4.9/bits/stl_map.h ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/bits/basic_ios.h ./include/jellyfish/offsets_key_value.hpp ../headers//usr/include/c++/4.9/bits/stl_function.h ../headers//usr/include/c++/4.9/ext/aligned_buffer.h ../headers//usr/include/c++/4.9/tuple ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/typeinfo ./include/jellyfish/simple_circular_buffer.hpp ../headers//usr/include/c++/4.9/istream ./include/jellyfish/err.hpp ../headers//usr/include/c++/4.9/bits/stl_set.h ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/sys/types.h ../headers//usr/include/time.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/pthreadtypes.h ../headers//usr/include/unistd.h ../headers//usr/include/c++/4.9/type_traits ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/new ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/utility ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/bits/uses_allocator.h ../headers//usr/include/c++/4.9/limits ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/ostream.tcc ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/ctime ../headers//usr/include/c++/4.9/bits/ptr_traits.h ../headers//usr/include/c++/4.9/bits/alloc_traits.h ../headers//usr/include/c++/4.9/cmath ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/random.h ../headers//usr/include/c++/4.9/cstring ../headers//usr/include/c++/4.9/bits/shared_ptr_base.h ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/bits/ostream_insert.h ../headers//usr/include/c++/4.9/bits/postypes.h ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/concurrence.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/include/wchar.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/stdint.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ../headers//usr/include/x86_64-linux-gnu/bits/mathdef.h ../headers//usr/include/string.h ./include/jellyfish/storage.hpp ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ./include/jellyfish/int128.hpp ../headers//usr/include/assert.h ../headers//usr/include/pthread.h ./unit_tests/test_main.hpp ../headers//usr/include/c++/4.9/cxxabi.h

unassigned

../headers//usr/include/c++/4.9/bits/locale_facets.h ./unit_tests/gtest/gtest.h

test_mer_overlap_sequence_parser.cc

./include/jellyfish/circular_buffer.hpp ../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h ./include/jellyfish/divisor.hpp ./include/jellyfish/cpp_array.hpp ../headers//usr/include/c++/4.9/bits/unique_ptr.h ../headers//usr/include/c++/4.9/bits/stl_tempbuf.h ./include/jellyfish/cooperative_pool2.hpp ./include/jellyfish/mer_overlap_sequence_parser.hpp ./include/jellyfish/locks_pthread.hpp ../headers//usr/include/c++/4.9/ostream ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/c++/4.9/bits/move.h ./unit_tests/test_main.hpp ../headers//usr/include/c++/4.9/sstream ../headers//usr/include/c++/4.9/streambuf ./include/jellyfish/atomic_field.hpp ./include/jellyfish/compare_and_swap.hpp ../headers//usr/include/c++/4.9/istream ../headers//usr/include/c++/4.9/bits/basic_ios.h ../headers//usr/include/x86_64-linux-gnu/bits/string3.h ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/fstream ../headers//usr/include/c++/4.9/tuple ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/new ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/c++/4.9/type_traits ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/ostream.tcc ../headers//usr/include/c++/4.9/bits/postypes.h ../headers//usr/include/c++/4.9/limits ../headers//usr/include/c++/4.9/bits/uses_allocator.h ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/ctime ../headers//usr/include/c++/4.9/bits/ptr_traits.h ../headers//usr/include/c++/4.9/bits/alloc_traits.h ../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/bits/shared_ptr_base.h ../headers//usr/include/c++/4.9/cstring ../headers//usr/include/c++/4.9/exception ../headers//usr/include/c++/4.9/cstddef ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/c++/4.9/bits/fstream.tcc ../headers//usr/include/c++/4.9/bits/ostream_insert.h ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/concurrence.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/wchar.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/time.h ../headers//usr/include/stdint.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/bits/pthreadtypes.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ../headers//usr/include/string.h ./include/jellyfish/err.hpp ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ../headers//usr/include/pthread.h ../headers//usr/include/unistd.h ../headers//usr/include/c++/4.9/cxxabi.h

unassigned

../headers//usr/include/c++/4.9/bits/locale_facets.h ./unit_tests/gtest/gtest.h

test_file_header.cc

../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h ./include/jellyfish/json.h ./include/jellyfish/generic_file_header.hpp ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/bits/basic_ios.h ../headers//usr/include/c++/4.9/bits/stl_deque.h ../headers//usr/include/c++/4.9/bits/deque.tcc ../headers//usr/include/c++/4.9/bits/stl_construct.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/x86_64-linux-gnu/bits/unistd.h ../headers//usr/include/c++/4.9/sstream ../headers//usr/include/c++/4.9/streambuf ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/c++/4.9/ext/string_conversions.h ../headers//usr/include/c++/4.9/istream ../headers//usr/include/c++/4.9/ostream ./include/jellyfish/rectangular_binary_matrix.hpp ./unit_tests/test_main.hpp ./include/jellyfish/file_header.hpp ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/c++/4.9/iomanip ../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/x86_64-linux-gnu/bits/string3.h ../headers//usr/include/stdlib.h ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/libio.h ../headers//usr/include/stdio.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/wchar.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/type_traits ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/bits/postypes.h ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/new ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/ostream.tcc ../headers//usr/include/c++/4.9/limits ../headers//usr/include/c++/4.9/bits/stl_uninitialized.h ../headers//usr/include/c++/4.9/bits/uses_allocator.h ../headers//usr/include/c++/4.9/tuple ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/ctime ../headers//usr/include/c++/4.9/bits/stl_tree.h ../headers//usr/include/c++/4.9/bits/ptr_traits.h ../headers//usr/include/c++/4.9/bits/alloc_traits.h ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/bits/stl_map.h ../headers//usr/include/c++/4.9/bits/stl_function.h ../headers//usr/include/c++/4.9/bits/stl_stack.h ../headers//usr/include/c++/4.9/cmath ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/random.h ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/bits/sstream.tcc ../headers//usr/include/c++/4.9/bits/move.h ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/c++/4.9/bits/ostream_insert.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/time.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/stdint.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/bits/pthreadtypes.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/x86_64-linux-gnu/sys/types.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ../headers//usr/include/x86_64-linux-gnu/sys/utsname.h ./include/jellyfish/storage.hpp ../headers//usr/include/x86_64-linux-gnu/bits/mathdef.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ../headers//usr/include/string.h ../headers//usr/include/c++/4.9/cxxabi.h

unassigned

../headers//usr/include/c++/4.9/bits/locale_facets.h ./unit_tests/gtest/gtest.h

test_mer_iterator.cc

./include/jellyfish/circular_buffer.hpp ../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h ./include/jellyfish/divisor.hpp ../headers//usr/include/c++/4.9/bits/char_traits.h ./include/jellyfish/mer_iterator.hpp ./include/jellyfish/mer_dna.hpp ../headers//usr/include/x86_64-linux-gnu/bits/string3.h ./include/jellyfish/mer_overlap_sequence_parser.hpp ./include/jellyfish/cpp_array.hpp ../headers//usr/include/c++/4.9/bits/unique_ptr.h ../headers//usr/include/c++/4.9/bits/stl_tempbuf.h ./include/jellyfish/locks_pthread.hpp ./include/jellyfish/cooperative_pool2.hpp ../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/bits/stl_construct.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ./include/jellyfish/whole_sequence_parser.hpp ../headers//usr/include/c++/4.9/bits/move.h ./unit_tests/test_main.hpp ../headers//usr/include/c++/4.9/sstream ../headers//usr/include/c++/4.9/streambuf ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/c++/4.9/bits/stl_uninitialized.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ./include/jellyfish/atomic_field.hpp ./include/jellyfish/compare_and_swap.hpp ./include/jellyfish/mer_qual_iterator.hpp ../headers//usr/include/c++/4.9/tuple ../headers//usr/include/c++/4.9/new ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/bits/basic_ios.h ../headers//usr/include/c++/4.9/istream ../headers//usr/include/c++/4.9/ostream ../headers//usr/include/c++/4.9/fstream ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/libio.h ../headers//usr/include/stdio.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/wchar.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/type_traits ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/ostream.tcc ../headers//usr/include/c++/4.9/bits/postypes.h ../headers//usr/include/c++/4.9/limits ../headers//usr/include/c++/4.9/bits/uses_allocator.h ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/ctime ../headers//usr/include/c++/4.9/bits/ptr_traits.h ../headers//usr/include/c++/4.9/bits/alloc_traits.h ../headers//usr/include/c++/4.9/bits/shared_ptr_base.h ../headers//usr/include/c++/4.9/cstring ../headers//usr/include/c++/4.9/exception ../headers//usr/include/c++/4.9/cstddef ../headers//usr/include/c++/4.9/cmath ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/random.h ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/bits/fstream.tcc ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/c++/4.9/bits/ostream_insert.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/time.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/concurrence.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/stdint.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/bits/pthreadtypes.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ../headers//usr/include/string.h ./include/jellyfish/err.hpp ../headers//usr/include/x86_64-linux-gnu/bits/mathdef.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ./include/jellyfish/int128.hpp ../headers//usr/include/pthread.h ../headers//usr/include/unistd.h ../headers//usr/include/c++/4.9/cxxabi.h

unassigned

./unit_tests/gtest/gtest.h

test_hash_counter.cc

./include/jellyfish/misc.hpp ./include/jellyfish/large_hash_array.hpp ../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h ./include/jellyfish/divisor.hpp ../headers//usr/include/c++/4.9/sstream ../headers//usr/include/c++/4.9/streambuf ./include/jellyfish/hash_counter.hpp ./include/jellyfish/rectangular_binary_matrix.hpp ./include/jellyfish/allocators_mmap.hpp ./include/jellyfish/locks_pthread.hpp ./include/jellyfish/mer_dna.hpp ./include/jellyfish/offsets_key_value.hpp ./include/jellyfish/atomic_gcc.hpp ../headers//usr/include/c++/4.9/bits/stl_tree.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/ext/aligned_buffer.h ../headers//usr/include/c++/4.9/tuple ../headers//usr/include/x86_64-linux-gnu/bits/string3.h ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/c++/4.9/bits/basic_ios.h ../headers//usr/include/c++/4.9/istream ../headers//usr/include/c++/4.9/ostream ./include/jellyfish/err.hpp ./include/jellyfish/large_hash_iterator.hpp ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/c++/4.9/stdexcept ../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/bits/stl_map.h ./include/jellyfish/time.hpp ./include/jellyfish/dumper.hpp ../headers//usr/include/c++/4.9/bits/stl_construct.h ./include/jellyfish/thread_exec.hpp ../headers//usr/include/c++/4.9/bits/move.h ../headers//usr/include/c++/4.9/bits/stl_uninitialized.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/bits/stl_function.h ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/c++/4.9/limits ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/c++/4.9/type_traits ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/new ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/ostream.tcc ../headers//usr/include/c++/4.9/bits/stl_bvector.h ../headers//usr/include/c++/4.9/utility ../headers//usr/include/c++/4.9/bits/uses_allocator.h ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/ctime ../headers//usr/include/c++/4.9/bits/ptr_traits.h ../headers//usr/include/c++/4.9/bits/alloc_traits.h ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/cmath ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/random.h ../headers//usr/include/c++/4.9/cstring ../headers//usr/include/c++/4.9/bits/shared_ptr_base.h ../headers//usr/include/c++/4.9/bits/postypes.h ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/c++/4.9/bits/ostream_insert.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/wchar.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/time.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/concurrence.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/stdint.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/bits/time.h ../headers//usr/include/x86_64-linux-gnu/bits/pthreadtypes.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/sys/types.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ../headers//usr/include/x86_64-linux-gnu/bits/mathdef.h ../headers//usr/include/string.h ./include/jellyfish/simple_circular_buffer.hpp ./include/jellyfish/storage.hpp ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ../headers//usr/include/c++/4.9/exception ./include/jellyfish/int128.hpp ../headers//usr/include/assert.h ../headers//usr/include/pthread.h ../headers//usr/include/c++/4.9/cxxabi.h

unassigned

../headers//usr/include/c++/4.9/bits/locale_facets.h ./unit_tests/gtest/gtest.h

test_mer_heap.cc

./include/jellyfish/misc.hpp ./include/jellyfish/large_hash_array.hpp ../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h ./include/jellyfish/rectangular_binary_matrix.hpp ./include/jellyfish/allocators_mmap.hpp ./include/jellyfish/divisor.hpp ../headers//usr/include/c++/4.9/ostream ../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/bits/stl_construct.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/bits/stl_heap.h ./include/jellyfish/mer_dna.hpp ./include/jellyfish/mer_heap.hpp ../headers//usr/include/c++/4.9/sstream ../headers//usr/include/c++/4.9/streambuf ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/c++/4.9/bits/stl_uninitialized.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/typeinfo ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/c++/4.9/bits/basic_ios.h ../headers//usr/include/c++/4.9/istream ./include/jellyfish/offsets_key_value.hpp ../headers//usr/include/x86_64-linux-gnu/bits/string3.h ./include/jellyfish/err.hpp ../headers//usr/include/c++/4.9/bits/move.h ./include/jellyfish/atomic_gcc.hpp ./include/jellyfish/large_hash_iterator.hpp ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/c++/4.9/limits ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/c++/4.9/type_traits ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/new ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/ostream.tcc ../headers//usr/include/c++/4.9/bits/uses_allocator.h ../headers//usr/include/c++/4.9/tuple ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/ctime ../headers//usr/include/c++/4.9/bits/ptr_traits.h ../headers//usr/include/c++/4.9/bits/alloc_traits.h ../headers//usr/include/c++/4.9/cmath ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/random.h ../headers//usr/include/c++/4.9/cstring ../headers//usr/include/c++/4.9/bits/shared_ptr_base.h ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/bits/ostream_insert.h ../headers//usr/include/c++/4.9/bits/postypes.h ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/wchar.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/time.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/concurrence.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/stdint.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/bits/pthreadtypes.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ../headers//usr/include/x86_64-linux-gnu/bits/mathdef.h ../headers//usr/include/string.h ./include/jellyfish/simple_circular_buffer.hpp ./include/jellyfish/storage.hpp ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ./include/jellyfish/int128.hpp ../headers//usr/include/assert.h ../headers//usr/include/pthread.h ../headers//usr/include/c++/4.9/cxxabi.h

unassigned

../headers//usr/include/c++/4.9/bits/locale_facets.h ./unit_tests/gtest/gtest.h ../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/ext/new_allocator.h

test_stream_iterator.cc

../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h ./include/jellyfish/err.hpp ../headers//usr/include/c++/4.9/ostream ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/bits/basic_ios.h ../headers//usr/include/c++/4.9/sstream ../headers//usr/include/c++/4.9/streambuf ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/c++/4.9/bits/stl_uninitialized.h ../headers//usr/include/c++/4.9/bits/stl_construct.h ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/fstream ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/istream ./include/jellyfish/stream_iterator.hpp ../headers//usr/include/c++/4.9/iostream ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdlib.h ../headers//usr/include/time.h ../headers//usr/include/x86_64-linux-gnu/sys/types.h ../headers//usr/include/x86_64-linux-gnu/bits/pthreadtypes.h ../headers//usr/include/unistd.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/type_traits ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/new ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/ostream.tcc ../headers//usr/include/c++/4.9/bits/uses_allocator.h ../headers//usr/include/c++/4.9/tuple ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/ctime ../headers//usr/include/c++/4.9/bits/ptr_traits.h ../headers//usr/include/c++/4.9/bits/alloc_traits.h ../headers//usr/include/c++/4.9/bits/postypes.h ../headers//usr/include/c++/4.9/cstring ../headers//usr/include/c++/4.9/cmath ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/random.h ../headers//usr/include/c++/4.9/bits/shared_ptr_base.h ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/bits/move.h ../headers//usr/include/c++/4.9/bits/fstream.tcc ../headers//usr/include/c++/4.9/bits/ostream_insert.h ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/include/wchar.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/concurrence.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/stdint.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ../headers//usr/include/string.h ./include/jellyfish/misc.hpp ../headers//usr/include/x86_64-linux-gnu/bits/mathdef.h ../headers//usr/include/c++/4.9/cxxabi.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ../headers//usr/include/x86_64-linux-gnu/bits/errno.h

unassigned

./unit_tests/gtest/gtest.h

test_token_ring.cc

../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h ../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/bits/stl_construct.h ./include/jellyfish/locks_pthread.hpp ../headers//usr/include/c++/4.9/ext/new_allocator.h ./include/jellyfish/thread_exec.hpp ./include/jellyfish/token_ring.hpp ../headers//usr/include/c++/4.9/ostream ../headers//usr/include/c++/4.9/sstream ../headers//usr/include/c++/4.9/streambuf ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/c++/4.9/bits/basic_ios.h ../headers//usr/include/c++/4.9/istream ../headers//usr/include/c++/4.9/bits/stl_uninitialized.h ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/libio.h ../headers//usr/include/stdio.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/wchar.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/type_traits ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/new ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/ostream.tcc ../headers//usr/include/c++/4.9/bits/uses_allocator.h ../headers//usr/include/c++/4.9/tuple ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/ctime ../headers//usr/include/c++/4.9/bits/ptr_traits.h ../headers//usr/include/c++/4.9/bits/alloc_traits.h ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/cstring ../headers//usr/include/c++/4.9/cmath ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/random.h ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/bits/move.h ../headers//usr/include/c++/4.9/bits/ostream_insert.h ../headers//usr/include/c++/4.9/bits/postypes.h ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/time.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/stdint.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/bits/pthreadtypes.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ../headers//usr/include/string.h ../headers//usr/include/x86_64-linux-gnu/bits/mathdef.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ../headers//usr/include/pthread.h ../headers//usr/include/c++/4.9/cxxabi.h ./include/jellyfish/err.hpp

unassigned

../headers//usr/include/c++/4.9/bits/locale_facets.h ./unit_tests/gtest/gtest.h

test_text_dumper.cc

./include/jellyfish/misc.hpp ./include/jellyfish/large_hash_array.hpp ./include/jellyfish/dumper.hpp ../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h ./include/jellyfish/divisor.hpp ./include/jellyfish/text_dumper.hpp ../headers//usr/include/c++/4.9/fstream ./include/jellyfish/sorted_dumper.hpp ../headers//usr/include/c++/4.9/streambuf ../headers//usr/include/c++/4.9/ostream ../headers//usr/include/c++/4.9/bits/basic_ios.h ../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/bits/stl_construct.h ./include/jellyfish/locks_pthread.hpp ../headers//usr/include/c++/4.9/ext/new_allocator.h ./include/jellyfish/thread_exec.hpp ../headers//usr/include/c++/4.9/bits/stl_heap.h ./include/jellyfish/mer_dna.hpp ./include/jellyfish/mer_heap.hpp ./include/jellyfish/json.h ./include/jellyfish/generic_file_header.hpp ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/sstream ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/c++/4.9/bits/stl_uninitialized.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ./include/jellyfish/offsets_key_value.hpp ./include/jellyfish/atomic_gcc.hpp ../headers//usr/include/c++/4.9/bits/stl_tree.h ../headers//usr/include/c++/4.9/bits/stl_function.h ../headers//usr/include/c++/4.9/ext/aligned_buffer.h ../headers//usr/include/c++/4.9/tuple ../headers//usr/include/x86_64-linux-gnu/bits/string3.h ./include/jellyfish/rectangular_binary_matrix.hpp ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/c++/4.9/ext/string_conversions.h ../headers//usr/include/c++/4.9/istream ./include/jellyfish/allocators_mmap.hpp ./include/jellyfish/err.hpp ./include/jellyfish/hash_counter.hpp ./include/jellyfish/large_hash_iterator.hpp ../headers//usr/include/c++/4.9/stdexcept ../headers//usr/include/c++/4.9/bits/stl_map.h ./include/jellyfish/time.hpp ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/iomanip ./include/jellyfish/token_ring.hpp ./unit_tests/test_main.hpp ../headers//usr/include/c++/4.9/bits/move.h ./include/jellyfish/simple_circular_buffer.hpp ./include/jellyfish/file_header.hpp ../headers//usr/include/stdlib.h ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/c++/4.9/type_traits ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/new ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/utility ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/postypes.h ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/bits/uses_allocator.h ../headers//usr/include/c++/4.9/limits ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/ostream.tcc ../headers//usr/include/c++/4.9/bits/stl_bvector.h ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/ctime ../headers//usr/include/c++/4.9/bits/ptr_traits.h ../headers//usr/include/c++/4.9/bits/alloc_traits.h ../headers//usr/include/c++/4.9/cstring ../headers//usr/include/c++/4.9/cmath ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/random.h ../headers//usr/include/c++/4.9/bits/shared_ptr_base.h ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/bits/fstream.tcc ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/c++/4.9/bits/ostream_insert.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/concurrence.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/wchar.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/time.h ../headers//usr/include/stdint.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/bits/time.h ../headers//usr/include/x86_64-linux-gnu/bits/pthreadtypes.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/x86_64-linux-gnu/sys/types.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ../headers//usr/include/string.h ./include/jellyfish/storage.hpp ../headers//usr/include/x86_64-linux-gnu/sys/time.h ../headers//usr/include/x86_64-linux-gnu/bits/mathdef.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ../headers//usr/include/c++/4.9/exception ../headers//usr/include/pthread.h ../headers//usr/include/x86_64-linux-gnu/bits/errno.h ../headers//usr/include/unistd.h ../headers//usr/include/c++/4.9/cxxabi.h

unassigned

../headers//usr/include/c++/4.9/bits/locale_facets.h ./unit_tests/gtest/gtest.h

test_dumpers.cc

./include/jellyfish/misc.hpp ./include/jellyfish/large_hash_array.hpp ./include/jellyfish/dumper.hpp ./include/jellyfish/mapped_file.hpp ../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h ./include/jellyfish/divisor.hpp ./include/jellyfish/sorted_dumper.hpp ../headers//usr/include/c++/4.9/fstream ../headers//usr/include/c++/4.9/streambuf ../headers//usr/include/c++/4.9/ostream ../headers//usr/include/c++/4.9/bits/basic_ios.h ../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/bits/stl_construct.h ./include/jellyfish/locks_pthread.hpp ../headers//usr/include/c++/4.9/ext/new_allocator.h ./include/jellyfish/thread_exec.hpp ./include/jellyfish/text_dumper.hpp ./include/jellyfish/binary_dumper.hpp ./unit_tests/test_main.hpp ./include/jellyfish/err.hpp ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/c++/4.9/bits/ios_base.h ./include/jellyfish/generic_file_header.hpp ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/c++/4.9/iomanip ./include/jellyfish/json.h ../headers//usr/include/x86_64-linux-gnu/bits/string3.h ../headers//usr/include/c++/4.9/bits/stl_deque.h ../headers//usr/include/c++/4.9/bits/deque.tcc ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/bits/unistd.h ../headers//usr/include/x86_64-linux-gnu/bits/fcntl2.h ../headers//usr/include/x86_64-linux-gnu/sys/stat.h ../headers//usr/include/c++/4.9/sstream ./include/jellyfish/rectangular_binary_matrix.hpp ./include/jellyfish/mer_dna.hpp ../headers//usr/include/c++/4.9/ext/string_conversions.h ../headers//usr/include/c++/4.9/bits/basic_string.tcc ./include/jellyfish/file_header.hpp ./include/jellyfish/hash_counter.hpp ./include/jellyfish/allocators_mmap.hpp ./include/jellyfish/time.hpp ../headers//usr/include/c++/4.9/bits/stl_heap.h ./include/jellyfish/mer_heap.hpp ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/bits/stl_uninitialized.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ./include/jellyfish/offsets_key_value.hpp ./include/jellyfish/large_hash_iterator.hpp ./include/jellyfish/atomic_gcc.hpp ../headers//usr/include/c++/4.9/istream ../headers//usr/include/c++/4.9/stdexcept ../headers//usr/include/c++/4.9/bits/move.h ./include/jellyfish/simple_circular_buffer.hpp ./include/jellyfish/token_ring.hpp ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/c++/4.9/limits ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/type_traits ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/bits/postypes.h ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/new ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/ostream.tcc ../headers//usr/include/c++/4.9/bits/stl_bvector.h ../headers//usr/include/c++/4.9/bits/istream.tcc ../headers//usr/include/c++/4.9/bits/uses_allocator.h ../headers//usr/include/c++/4.9/tuple ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/ctime ../headers//usr/include/c++/4.9/bits/stl_tree.h ../headers//usr/include/c++/4.9/bits/ptr_traits.h ../headers//usr/include/c++/4.9/bits/alloc_traits.h ../headers//usr/include/c++/4.9/cmath ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/random.h ../headers//usr/include/c++/4.9/cstring ../headers//usr/include/c++/4.9/bits/shared_ptr_base.h ../headers//usr/include/c++/4.9/bits/stl_map.h ../headers//usr/include/c++/4.9/bits/stl_function.h ../headers//usr/include/c++/4.9/bits/stl_stack.h ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/bits/fstream.tcc ../headers//usr/include/c++/4.9/bits/ostream_insert.h ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/wchar.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/time.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/concurrence.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/stdint.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/bits/time.h ../headers//usr/include/x86_64-linux-gnu/bits/pthreadtypes.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/x86_64-linux-gnu/sys/types.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ../headers//usr/include/x86_64-linux-gnu/bits/stat.h ../headers//usr/include/x86_64-linux-gnu/bits/mathdef.h ../headers//usr/include/string.h ./include/jellyfish/storage.hpp ../headers//usr/include/x86_64-linux-gnu/sys/time.h ../headers//usr/include/x86_64-linux-gnu/sys/utsname.h ../headers//usr/include/x86_64-linux-gnu/bits/fcntl-linux.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ../headers//usr/include/c++/4.9/exception ../headers//usr/include/pthread.h ../headers//usr/include/unistd.h ../headers//usr/include/x86_64-linux-gnu/bits/errno.h ../headers//usr/include/x86_64-linux-gnu/sys/mman.h ../headers//usr/include/x86_64-linux-gnu/bits/mathcalls.h ../headers//usr/include/assert.h ../headers//usr/include/ctype.h ../headers//usr/include/c++/4.9/cxxabi.h

unassigned

./unit_tests/gtest/gtest.h

test_mapped_file.cc

./include/jellyfish/mapped_file.hpp ../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h ./include/jellyfish/err.hpp ../headers//usr/include/c++/4.9/ostream ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/bits/basic_ios.h ../headers//usr/include/c++/4.9/sstream ../headers//usr/include/c++/4.9/streambuf ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/istream ./unit_tests/test_main.hpp ../headers//usr/include/c++/4.9/fstream ../headers//usr/include/x86_64-linux-gnu/bits/fcntl2.h ../headers//usr/include/x86_64-linux-gnu/sys/stat.h ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/libio.h ../headers//usr/include/stdio.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/wchar.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/type_traits ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/ostream.tcc ../headers//usr/include/c++/4.9/bits/postypes.h ../headers//usr/include/c++/4.9/bits/uses_allocator.h ../headers//usr/include/c++/4.9/tuple ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/ctime ../headers//usr/include/c++/4.9/bits/ptr_traits.h ../headers//usr/include/c++/4.9/bits/alloc_traits.h ../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/cstring ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/bits/move.h ../headers//usr/include/c++/4.9/bits/fstream.tcc ../headers//usr/include/c++/4.9/bits/ostream_insert.h ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/time.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/stdint.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/bits/pthreadtypes.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ../headers//usr/include/x86_64-linux-gnu/bits/stat.h ../headers//usr/include/x86_64-linux-gnu/bits/fcntl-linux.h ../headers//usr/include/string.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ../headers//usr/include/c++/4.9/new ../headers//usr/include/x86_64-linux-gnu/bits/errno.h ../headers//usr/include/x86_64-linux-gnu/sys/mman.h ../headers//usr/include/unistd.h ../headers//usr/include/c++/4.9/cxxabi.h

unassigned

./unit_tests/gtest/gtest.h

test_int128.cc

../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/c++/4.9/bits/basic_ios.h ../headers//usr/include/c++/4.9/istream ../headers//usr/include/c++/4.9/ostream ../headers//usr/include/c++/4.9/streambuf ../headers//usr/include/c++/4.9/sstream ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/c++/4.9/limits ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/type_traits ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/ostream.tcc ../headers//usr/include/c++/4.9/bits/uses_allocator.h ../headers//usr/include/c++/4.9/tuple ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/ctime ../headers//usr/include/c++/4.9/bits/ptr_traits.h ../headers//usr/include/c++/4.9/bits/alloc_traits.h ../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/cstring ./include/jellyfish/int128.hpp ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/wchar.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/time.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/stdint.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/bits/pthreadtypes.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ../headers//usr/include/string.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ../headers//usr/include/c++/4.9/new ../headers//usr/include/c++/4.9/cxxabi.h

unassigned

./unit_tests/gtest/gtest.h ./include/jellyfish/mapped_file.hpp

test_mer_dna_bloom_counter.cc

../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h ./include/jellyfish/divisor.hpp ../headers//usr/include/string.h ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/bits/char_traits.h ./unit_tests/test_main.hpp ./include/jellyfish/err.hpp ../headers//usr/include/c++/4.9/ostream ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/bits/basic_ios.h ../headers//usr/include/x86_64-linux-gnu/bits/fcntl2.h ../headers//usr/include/x86_64-linux-gnu/sys/stat.h ../headers//usr/include/c++/4.9/sstream ./include/jellyfish/mer_dna_bloom_counter.hpp ./include/jellyfish/rectangular_binary_matrix.hpp ./include/jellyfish/misc.hpp ../headers//usr/include/c++/4.9/streambuf ./include/jellyfish/mer_dna.hpp ./include/jellyfish/bloom_filter.hpp ./include/jellyfish/allocators_mmap.hpp ./include/jellyfish/bloom_counter2.hpp ./include/jellyfish/bloom_common.hpp ../headers//usr/include/x86_64-linux-gnu/bits/string3.h ../headers//usr/include/c++/4.9/bits/stl_tree.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/istream ../headers//usr/include/c++/4.9/bits/move.h ../headers//usr/include/c++/4.9/bits/stl_set.h ./include/jellyfish/atomic_field.hpp ./include/jellyfish/atomic_gcc.hpp ../headers//usr/include/c++/4.9/ext/aligned_buffer.h ../headers//usr/include/c++/4.9/fstream ../headers//usr/include/c++/4.9/iostream ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/sys/types.h ../headers//usr/include/time.h ../headers//usr/include/x86_64-linux-gnu/bits/pthreadtypes.h ../headers//usr/include/c++/4.9/type_traits ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/typeinfo ../headers//usr/include/c++/4.9/new ../headers//usr/include/c++/4.9/cmath ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/postypes.h ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/limits ../headers//usr/include/c++/4.9/bits/stl_bvector.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/random.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/ostream.tcc ../headers//usr/include/c++/4.9/bits/uses_allocator.h ../headers//usr/include/c++/4.9/tuple ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/ctime ../headers//usr/include/c++/4.9/bits/ptr_traits.h ../headers//usr/include/c++/4.9/bits/alloc_traits.h ../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/cstring ../headers//usr/include/c++/4.9/bits/stl_function.h ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/bits/fstream.tcc ../headers//usr/include/c++/4.9/bits/ostream_insert.h ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/x86_64-linux-gnu/bits/mathdef.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/include/wchar.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/stdint.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ../headers//usr/include/x86_64-linux-gnu/bits/stat.h ../headers//usr/include/c++/4.9/cxxabi.h ../headers//usr/include/x86_64-linux-gnu/bits/fcntl-linux.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ./include/jellyfish/int128.hpp ../headers//usr/include/unistd.h ../headers//usr/include/x86_64-linux-gnu/bits/errno.h ../headers//usr/include/x86_64-linux-gnu/sys/mman.h ../headers//usr/include/x86_64-linux-gnu/bits/mathcalls.h

unassigned

../headers//usr/include/c++/4.9/bits/locale_facets.h ./unit_tests/gtest/gtest.h

test_whole_sequence_parser.cc

./include/jellyfish/circular_buffer.hpp ../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h ./include/jellyfish/divisor.hpp ./include/jellyfish/cooperative_pool2.hpp ../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/bits/stl_construct.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ./include/jellyfish/cpp_array.hpp ../headers//usr/include/c++/4.9/bits/unique_ptr.h ../headers//usr/include/c++/4.9/bits/stl_tempbuf.h ./include/jellyfish/whole_sequence_parser.hpp ../headers//usr/include/c++/4.9/bits/move.h ./unit_tests/test_main.hpp ../headers//usr/include/c++/4.9/sstream ../headers//usr/include/c++/4.9/streambuf ./include/jellyfish/atomic_field.hpp ./include/jellyfish/compare_and_swap.hpp ../headers//usr/include/x86_64-linux-gnu/bits/string3.h ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/tuple ../headers//usr/include/c++/4.9/bits/stl_uninitialized.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/new ../headers//usr/include/c++/4.9/bits/basic_ios.h ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/c++/4.9/istream ../headers//usr/include/c++/4.9/ostream ../headers//usr/include/c++/4.9/fstream ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/stdlib.h ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/libio.h ../headers//usr/include/stdio.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/wchar.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/type_traits ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/ostream.tcc ../headers//usr/include/c++/4.9/bits/postypes.h ../headers//usr/include/c++/4.9/limits ../headers//usr/include/c++/4.9/bits/uses_allocator.h ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/ctime ../headers//usr/include/c++/4.9/bits/ptr_traits.h ../headers//usr/include/c++/4.9/bits/alloc_traits.h ../headers//usr/include/c++/4.9/bits/shared_ptr_base.h ../headers//usr/include/c++/4.9/cstring ../headers//usr/include/c++/4.9/exception ../headers//usr/include/c++/4.9/cstddef ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/c++/4.9/bits/fstream.tcc ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/c++/4.9/bits/ostream_insert.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/time.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/concurrence.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/stdint.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/bits/pthreadtypes.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ../headers//usr/include/string.h ./include/jellyfish/err.hpp ./include/jellyfish/locks_pthread.hpp ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ../headers//usr/include/unistd.h ../headers//usr/include/c++/4.9/cxxabi.h

unassigned

./unit_tests/gtest/gtest.h

test_allocators_mmap.cc

../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h ../headers//usr/include/c++/4.9/sstream ../headers//usr/include/c++/4.9/streambuf ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/c++/4.9/bits/basic_ios.h ../headers//usr/include/c++/4.9/istream ../headers//usr/include/c++/4.9/ostream ./include/jellyfish/allocators_mmap.hpp ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/type_traits ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/new ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/ostream.tcc ../headers//usr/include/c++/4.9/bits/uses_allocator.h ../headers//usr/include/c++/4.9/tuple ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/ctime ../headers//usr/include/c++/4.9/bits/ptr_traits.h ../headers//usr/include/c++/4.9/bits/alloc_traits.h ../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/cmath ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/random.h ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/c++/4.9/bits/ostream_insert.h ../headers//usr/include/c++/4.9/bits/postypes.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/wchar.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/time.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/stdint.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/bits/pthreadtypes.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ../headers//usr/include/x86_64-linux-gnu/bits/mathdef.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ../headers//usr/include/c++/4.9/cxxabi.h

unassigned

../headers//usr/include/c++/4.9/bits/locale_facets.h ./unit_tests/gtest/gtest.h

test_cooperative_pool2.cc

./include/jellyfish/circular_buffer.hpp ../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h ./include/jellyfish/divisor.hpp ../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ./include/jellyfish/cooperative_pool2.hpp ./include/jellyfish/thread_exec.hpp ../headers//usr/include/c++/4.9/ostream ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/c++/4.9/bits/stl_construct.h ./include/jellyfish/atomic_field.hpp ./include/jellyfish/compare_and_swap.hpp ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/bits/stl_uninitialized.h ../headers//usr/include/c++/4.9/typeinfo ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/c++/4.9/bits/basic_ios.h ../headers//usr/include/c++/4.9/sstream ../headers//usr/include/c++/4.9/streambuf ../headers//usr/include/c++/4.9/istream ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/type_traits ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/new ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/ostream.tcc ../headers//usr/include/c++/4.9/bits/uses_allocator.h ../headers//usr/include/c++/4.9/tuple ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/ctime ../headers//usr/include/c++/4.9/bits/ptr_traits.h ../headers//usr/include/c++/4.9/bits/alloc_traits.h ../headers//usr/include/c++/4.9/cstring ../headers//usr/include/c++/4.9/cmath ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/random.h ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/bits/move.h ../headers//usr/include/c++/4.9/bits/ostream_insert.h ../headers//usr/include/c++/4.9/bits/postypes.h ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/wchar.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/time.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/stdint.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/bits/pthreadtypes.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ./include/jellyfish/locks_pthread.hpp ../headers//usr/include/string.h ../headers//usr/include/x86_64-linux-gnu/bits/mathdef.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ../headers//usr/include/assert.h ../headers//usr/include/pthread.h ../headers//usr/include/unistd.h ../headers//usr/include/c++/4.9/cxxabi.h ./include/jellyfish/err.hpp

unassigned

../headers//usr/include/c++/4.9/bits/locale_facets.h ./unit_tests/gtest/gtest.h

test_generator_manager.cc

./include/jellyfish/generator_manager.hpp ../headers//usr/include/c++/4.9/bits/basic_ios.h ../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h ../headers//usr/include/c++/4.9/ext/stdio_filebuf.h ../headers//usr/include/c++/4.9/fstream ../headers//usr/include/c++/4.9/streambuf ../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/bits/stl_construct.h ../headers//usr/include/c++/4.9/sstream ../headers//usr/include/c++/4.9/bits/stl_tree.h ../headers//usr/include/c++/4.9/bits/stl_map.h ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/c++/4.9/bits/stl_uninitialized.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/c++/4.9/istream ../headers//usr/include/c++/4.9/ostream ../headers//usr/include/x86_64-linux-gnu/sys/stat.h ./unit_tests/test_main.hpp ../headers//usr/include/c++/4.9/bits/ios_base.h ./include/jellyfish/err.hpp ../headers//usr/include/x86_64-linux-gnu/bits/fcntl2.h ../headers//usr/include/x86_64-linux-gnu/bits/unistd.h ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/sys/types.h ../headers//usr/include/time.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/pthreadtypes.h ../headers//usr/include/x86_64-linux-gnu/bits/stat.h ../headers//usr/include/unistd.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/include/wchar.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/type_traits ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/bits/postypes.h ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/ostream.tcc ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/basic_file.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++io.h ../headers//usr/include/c++/4.9/bits/uses_allocator.h ../headers//usr/include/c++/4.9/tuple ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/ctime ../headers//usr/include/c++/4.9/bits/ptr_traits.h ../headers//usr/include/c++/4.9/bits/alloc_traits.h ../headers//usr/include/c++/4.9/cstring ../headers//usr/include/c++/4.9/bits/stl_function.h ../headers//usr/include/c++/4.9/bits/fstream.tcc ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/bits/move.h ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/c++/4.9/bits/ostream_insert.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/aligned_buffer.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/stdint.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ../headers//usr/include/string.h ../headers//usr/include/c++/4.9/new ../headers//usr/include/c++/4.9/cxxabi.h

unassigned

./unit_tests/gtest/gtest.h

test_atomic_bits_array.cc

../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h ./include/jellyfish/divisor.hpp ../headers//usr/include/c++/4.9/sstream ../headers//usr/include/c++/4.9/streambuf ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/c++/4.9/bits/basic_ios.h ../headers//usr/include/c++/4.9/istream ../headers//usr/include/c++/4.9/ostream ./include/jellyfish/atomic_bits_array.hpp ./include/jellyfish/allocators_mmap.hpp ./include/jellyfish/atomic_gcc.hpp ../headers//usr/include/c++/4.9/bits/unique_ptr.h ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/c++/4.9/type_traits ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/new ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/uses_allocator.h ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/tuple ../headers//usr/include/c++/4.9/bits/shared_ptr_base.h ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/ctime ../headers//usr/include/c++/4.9/bits/ptr_traits.h ../headers//usr/include/c++/4.9/bits/alloc_traits.h ../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/cmath ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/random.h ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/bits/move.h ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/c++/4.9/bits/ostream_insert.h ../headers//usr/include/c++/4.9/bits/postypes.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/ext/concurrence.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/wchar.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/time.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/bits/pthreadtypes.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/stdint.h ../headers//usr/include/locale.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ../headers//usr/include/x86_64-linux-gnu/bits/mathdef.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ./unit_tests/test_main.hpp ../headers//usr/include/c++/4.9/cxxabi.h

unassigned

./unit_tests/gtest/gtest.h

test_stdio_filebuf.cc

./include/jellyfish/stdio_filebuf.hpp ../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/x86_64-linux-gnu/bits/unistd.h ../headers//usr/include/c++/4.9/streambuf ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/string3.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h ../headers//usr/include/c++/4.9/sstream ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/bits/basic_ios.h ../headers//usr/include/c++/4.9/istream ../headers//usr/include/c++/4.9/ostream ./unit_tests/test_main.hpp ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/c++/4.9/fstream ../headers//usr/include/x86_64-linux-gnu/bits/fcntl2.h ../headers//usr/include/c++/4.9/bits/unique_ptr.h ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/sys/types.h ../headers//usr/include/time.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/pthreadtypes.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/include/wchar.h ../headers//usr/include/_G_config.h ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/type_traits ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/bits/postypes.h ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/new ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/ostream.tcc ../headers//usr/include/c++/4.9/bits/stl_construct.h ../headers//usr/include/c++/4.9/bits/stl_uninitialized.h ../headers//usr/include/c++/4.9/bits/uses_allocator.h ../headers//usr/include/c++/4.9/tuple ../headers//usr/include/c++/4.9/bits/shared_ptr_base.h ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/ctime ../headers//usr/include/c++/4.9/bits/ptr_traits.h ../headers//usr/include/c++/4.9/bits/alloc_traits.h ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/cstring ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/bits/move.h ../headers//usr/include/c++/4.9/bits/fstream.tcc ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/c++/4.9/bits/ostream_insert.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/ext/concurrence.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/stdint.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/wctype.h ../headers//usr/include/string.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ../headers//usr/include/unistd.h ../headers//usr/include/c++/4.9/cxxabi.h

backtrace.cc

../headers//usr/include/c++/4.9/typeinfo ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/libio.h ../headers//usr/include/stdio.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/wchar.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/basic_ios.h ../headers//usr/include/c++/4.9/ostream ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/exception ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/time.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/stdint.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ../headers//usr/include/c++/4.9/cxxabi.h ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/execinfo.h

unassigned

../headers//usr/include/c++/4.9/bits/locale_facets.h ./unit_tests/gtest/gtest.h

gtest-all.cc

../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/bits/stl_algo.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h ../headers//usr/include/c++/4.9/bits/stl_construct.h ../headers//usr/include/c++/4.9/ostream ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/string.h ../headers//usr/include/c++/4.9/sstream ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/x86_64-linux-gnu/sys/stat.h ../headers//usr/include/x86_64-linux-gnu/bits/string3.h ../headers//usr/include/x86_64-linux-gnu/bits/unistd.h ../headers//usr/include/c++/4.9/bits/basic_ios.h ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/streambuf ../headers//usr/include/c++/4.9/istream ../headers//usr/include/c++/4.9/iomanip ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/bits/move.h ../headers//usr/include/c++/4.9/bits/stl_uninitialized.h ../headers//usr/include/c++/4.9/bits/stl_tree.h ../headers//usr/include/c++/4.9/ext/aligned_buffer.h ../headers//usr/include/c++/4.9/typeinfo ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/bits/stl_set.h ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/type_traits ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/new ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/ostream.tcc ../headers//usr/include/c++/4.9/bits/stl_bvector.h ../headers//usr/include/c++/4.9/bits/uses_allocator.h ../headers//usr/include/c++/4.9/tuple ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/ctime ../headers//usr/include/c++/4.9/bits/ptr_traits.h ../headers//usr/include/c++/4.9/bits/alloc_traits.h ../headers//usr/include/c++/4.9/bits/stl_function.h ../headers//usr/include/c++/4.9/cmath ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/random.h ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/bits/postypes.h ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/c++/4.9/bits/ostream_insert.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stdarg.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/wchar.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/time.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/stdint.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/sched.h ../headers//usr/include/x86_64-linux-gnu/bits/time.h ../headers//usr/include/x86_64-linux-gnu/bits/pthreadtypes.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/sys/types.h ../headers//usr/include/x86_64-linux-gnu/bits/sigset.h ../headers//usr/include/x86_64-linux-gnu/sys/select.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ../headers//usr/include/x86_64-linux-gnu/bits/stat.h ../headers//usr/include/unistd.h ../headers//usr/include/regex.h ../headers//usr/include/x86_64-linux-gnu/bits/siginfo.h ../headers//usr/include/signal.h ../headers//usr/include/x86_64-linux-gnu/bits/sigaction.h ../headers//usr/include/x86_64-linux-gnu/bits/mathdef.h ../headers//usr/include/x86_64-linux-gnu/bits/fcntl-linux.h ../headers//usr/include/x86_64-linux-gnu/sys/time.h ../headers//usr/include/x86_64-linux-gnu/bits/socket_type.h ../headers//usr/include/x86_64-linux-gnu/bits/sockaddr.h ../headers//usr/include/x86_64-linux-gnu/bits/socket.h ../headers//usr/include/netdb.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ../headers//usr/include/x86_64-linux-gnu/bits/errno.h ../headers//usr/include/ctype.h ../headers//usr/include/pthread.h ../headers//usr/include/x86_64-linux-gnu/sys/socket.h ../headers//usr/include/x86_64-linux-gnu/sys/wait.h ../headers//usr/include/x86_64-linux-gnu/sys/mman.h ../headers//usr/include/x86_64-linux-gnu/bits/sched.h ../headers//usr/include/fcntl.h ../headers//usr/include/c++/4.9/cxxabi.h

unassigned

generate_sequence.cc

mersenne.cpp

backtrace.cc

dbg.cc

includes

unassigned

../headers//usr/include/c++/4.9/bits/locale_facets.h ./jellyfish/generate_sequence_cmdline.hpp ../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h ./include/jellyfish/err.hpp ../headers//usr/include/c++/4.9/ostream ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/bits/basic_ios.h

generate_sequence.cc

../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/c++/4.9/sstream ../headers//usr/include/c++/4.9/fstream ../headers//usr/include/c++/4.9/streambuf ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/c++/4.9/bits/stl_uninitialized.h ../headers//usr/include/c++/4.9/bits/stl_construct.h ./jellyfish/randomc.h ../headers//usr/include/c++/4.9/iostream ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdlib.h ../headers//usr/include/time.h ../headers//usr/include/x86_64-linux-gnu/sys/types.h ../headers//usr/include/c++/4.9/type_traits ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/new ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/ostream.tcc ../headers//usr/include/c++/4.9/bits/postypes.h ../headers//usr/include/c++/4.9/ctime ../headers//usr/include/c++/4.9/cstring ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/cmath ../headers//usr/include/c++/4.9/limits ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/random.h ../headers//usr/include/c++/4.9/bits/ptr_traits.h ../headers//usr/include/c++/4.9/bits/alloc_traits.h ../headers//usr/include/c++/4.9/bits/uses_allocator.h ../headers//usr/include/c++/4.9/tuple ../headers//usr/include/c++/4.9/bits/shared_ptr_base.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/bits/move.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/bits/fstream.tcc ../headers//usr/include/c++/4.9/bits/ostream_insert.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/concurrence.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/include/wchar.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/stdint.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ../headers//usr/include/string.h ../headers//usr/include/x86_64-linux-gnu/bits/mathdef.h ../headers//usr/include/getopt.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ../headers//usr/include/x86_64-linux-gnu/bits/errno.h ../headers//usr/include/ctype.h

mersenne.cpp

../headers//usr/include/stdint.h ./jellyfish/randomc.h

backtrace.cc

../headers//usr/include/c++/4.9/typeinfo ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/libio.h ../headers//usr/include/stdio.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/wchar.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/basic_ios.h ../headers//usr/include/c++/4.9/ostream ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/exception ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/time.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/stdint.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ../headers//usr/include/c++/4.9/cxxabi.h ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/execinfo.h

dbg.cc

../headers//usr/include/x86_64-linux-gnu/bits/string3.h ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/libio.h ../headers//usr/include/stdio.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/wchar.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/ctime ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/time.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/stdint.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/sched.h ../headers//usr/include/x86_64-linux-gnu/bits/time.h ../headers//usr/include/x86_64-linux-gnu/bits/pthreadtypes.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/sys/types.h ../headers//usr/include/x86_64-linux-gnu/bits/sigset.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ../headers//usr/include/x86_64-linux-gnu/bits/siginfo.h ../headers//usr/include/signal.h ../headers//usr/include/x86_64-linux-gnu/bits/sigaction.h ./include/jellyfish/time.hpp ./jellyfish/dbg.hpp ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/unistd.h

unassigned

jellyfish.cc

unassigned

count_main.cc

unassigned

info_main.cc

unassigned

dump_main.cc

unassigned

histo_main.cc

unassigned

stats_main.cc

unassigned

merge_main.cc

unassigned

bc_main.cc

unassigned

query_main.cc

unassigned

cite_main.cc

unassigned

mem_main.cc

unassigned

merge_files.cc

includes

unassigned

../headers//usr/include/c++/4.9/bits/locale_facets.h ../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h

jellyfish.cc

../headers//usr/include/c++/4.9/ostream ../headers//usr/include/c++/4.9/bits/basic_ios.h ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/libio.h ../headers//usr/include/stdio.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/wchar.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/type_traits ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/new ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/ostream.tcc ../headers//usr/include/c++/4.9/cmath ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/random.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/bits/ostream_insert.h ../headers//usr/include/c++/4.9/bits/postypes.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/time.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/stdint.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ../headers//usr/include/x86_64-linux-gnu/bits/mathdef.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ../headers//usr/include/string.h

unassigned

../headers//usr/include/c++/4.9/bits/locale_facets.h

count_main.cc

./include/jellyfish/circular_buffer.hpp ./include/jellyfish/generator_manager.hpp ../headers//usr/include/c++/4.9/bits/basic_ios.h ./include/jellyfish/misc.hpp ./include/jellyfish/large_hash_array.hpp ./include/jellyfish/dumper.hpp ./jellyfish/merge_files.hpp ../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h ./sub_commands/count_main_cmdline.hpp ../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ./include/jellyfish/atomic_gcc.hpp ./include/jellyfish/divisor.hpp ../headers//usr/include/c++/4.9/ext/stdio_filebuf.h ../headers//usr/include/c++/4.9/fstream ../headers//usr/include/c++/4.9/streambuf ./include/jellyfish/stream_manager.hpp ./include/jellyfish/locks_pthread.hpp ./include/jellyfish/binary_dumper.hpp ./include/jellyfish/sorted_dumper.hpp ../headers//usr/include/c++/4.9/ostream ../headers//usr/include/c++/4.9/bits/stl_construct.h ./include/jellyfish/thread_exec.hpp ./include/jellyfish/text_dumper.hpp ./include/jellyfish/err.hpp ./include/jellyfish/generic_file_header.hpp ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/c++/4.9/iomanip ./include/jellyfish/json.h ../headers//usr/include/x86_64-linux-gnu/bits/string3.h ../headers//usr/include/c++/4.9/bits/stl_deque.h ../headers//usr/include/c++/4.9/bits/deque.tcc ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/bits/unistd.h ../headers//usr/include/c++/4.9/sstream ../headers//usr/include/c++/4.9/ext/string_conversions.h ../headers//usr/include/c++/4.9/bits/basic_string.tcc ./include/jellyfish/file_header.hpp ./include/jellyfish/rectangular_binary_matrix.hpp ./include/jellyfish/cooperative_pool2.hpp ./include/jellyfish/cpp_array.hpp ../headers//usr/include/c++/4.9/bits/unique_ptr.h ../headers//usr/include/c++/4.9/bits/stl_tempbuf.h ./include/jellyfish/bloom_counter2.hpp ./include/jellyfish/allocators_mmap.hpp ./include/jellyfish/bloom_common.hpp ../headers//usr/include/c++/4.9/istream ./include/jellyfish/bloom_filter.hpp ./include/jellyfish/time.hpp ./include/jellyfish/mer_dna.hpp ./include/jellyfish/mer_dna_bloom_counter.hpp ./include/jellyfish/atomic_field.hpp ../headers//usr/include/c++/4.9/bits/stl_tree.h ../headers//usr/include/c++/4.9/bits/stl_map.h ./include/jellyfish/mer_qual_iterator.hpp ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/bits/stl_uninitialized.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ./include/jellyfish/compare_and_swap.hpp ../headers//usr/include/c++/4.9/bits/stl_set.h ../headers//usr/include/c++/4.9/bits/list.tcc ../headers//usr/include/c++/4.9/bits/stl_list.h ./include/jellyfish/whole_sequence_parser.hpp ./include/jellyfish/mer_overlap_sequence_parser.hpp ../headers//usr/include/c++/4.9/bits/move.h ./include/jellyfish/token_ring.hpp ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/tuple ../headers//usr/include/c++/4.9/new ./include/jellyfish/offsets_key_value.hpp ./include/jellyfish/hash_counter.hpp ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/backward/auto_ptr.h ../headers//usr/include/c++/4.9/chrono ../headers//usr/include/c++/4.9/stdexcept ./include/jellyfish/mer_iterator.hpp ./include/jellyfish/mer_heap.hpp ./include/jellyfish/large_hash_iterator.hpp ./include/jellyfish/simple_circular_buffer.hpp ../headers//usr/include/c++/4.9/bits/stl_heap.h ../headers//usr/include/c++/4.9/iostream ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/sys/types.h ../headers//usr/include/time.h ../headers//usr/include/x86_64-linux-gnu/bits/sigset.h ../headers//usr/include/x86_64-linux-gnu/bits/time.h ../headers//usr/include/x86_64-linux-gnu/bits/pthreadtypes.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/type_traits ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/bits/postypes.h ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/ostream.tcc ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/basic_file.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++io.h ../headers//usr/include/c++/4.9/bits/uses_allocator.h ../headers//usr/include/c++/4.9/bits/shared_ptr_base.h ../headers//usr/include/c++/4.9/limits ../headers//usr/include/c++/4.9/ctime ../headers//usr/include/c++/4.9/ratio ../headers//usr/include/c++/4.9/cstring ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/exception ../headers//usr/include/c++/4.9/cmath ../headers//usr/include/c++/4.9/bits/random.h ../headers//usr/include/c++/4.9/bits/ptr_traits.h ../headers//usr/include/c++/4.9/bits/alloc_traits.h ../headers//usr/include/c++/4.9/bits/stl_function.h ../headers//usr/include/c++/4.9/cstddef ../headers//usr/include/c++/4.9/bits/stl_stack.h ../headers//usr/include/c++/4.9/bits/fstream.tcc ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/bits/ostream_insert.h ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/ext/concurrence.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/aligned_buffer.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/unistd.h ../headers//usr/include/x86_64-linux-gnu/bits/siginfo.h ../headers//usr/include/signal.h ../headers//usr/include/x86_64-linux-gnu/bits/sigaction.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/include/wchar.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/stdint.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ../headers//usr/include/string.h ./include/jellyfish/storage.hpp ../headers//usr/include/x86_64-linux-gnu/bits/mathdef.h ../headers//usr/include/x86_64-linux-gnu/sys/time.h ../headers//usr/include/x86_64-linux-gnu/sys/utsname.h ./include/jellyfish/jellyfish.hpp ../headers//usr/include/getopt.h ../headers//usr/include/pthread.h ../headers//usr/include/x86_64-linux-gnu/bits/mathcalls.h ../headers//usr/include/x86_64-linux-gnu/bits/errno.h ../headers//usr/include/ctype.h ../headers//usr/include/assert.h

unassigned

../headers//usr/include/c++/4.9/bits/locale_facets.h ../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h ../headers//usr/include/c++/4.9/bits/deque.tcc ../headers//usr/include/c++/4.9/bits/stl_construct.h ./include/jellyfish/err.hpp ../headers//usr/include/c++/4.9/ostream ./include/jellyfish/json.h ../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/ext/new_allocator.h

info_main.cc

./include/jellyfish/generic_file_header.hpp ../headers//usr/include/c++/4.9/sstream ../headers//usr/include/c++/4.9/streambuf ../headers//usr/include/c++/4.9/bits/stl_deque.h ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/c++/4.9/bits/stl_uninitialized.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ./sub_commands/info_main_cmdline.hpp ../headers//usr/include/c++/4.9/bits/basic_ios.h ../headers//usr/include/c++/4.9/istream ../headers//usr/include/c++/4.9/fstream ../headers//usr/include/c++/4.9/bits/char_traits.h ./include/jellyfish/file_header.hpp ../headers//usr/include/stdlib.h ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/libio.h ../headers//usr/include/stdio.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/wchar.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/type_traits ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/new ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/ostream.tcc ../headers//usr/include/c++/4.9/bits/postypes.h ../headers//usr/include/c++/4.9/ctime ../headers//usr/include/c++/4.9/cstring ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/bits/stl_tree.h ../headers//usr/include/c++/4.9/bits/uses_allocator.h ../headers//usr/include/c++/4.9/tuple ../headers//usr/include/c++/4.9/bits/stl_map.h ../headers//usr/include/c++/4.9/bits/ptr_traits.h ../headers//usr/include/c++/4.9/bits/alloc_traits.h ../headers//usr/include/c++/4.9/bits/stl_function.h ../headers//usr/include/c++/4.9/bits/stl_stack.h ../headers//usr/include/c++/4.9/cmath ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/random.h ../headers//usr/include/c++/4.9/bits/shared_ptr_base.h ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/bits/move.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/bits/fstream.tcc ../headers//usr/include/c++/4.9/bits/ostream_insert.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/time.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/concurrence.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/stdint.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ../headers//usr/include/string.h ./include/jellyfish/rectangular_binary_matrix.hpp ./include/jellyfish/misc.hpp ../headers//usr/include/x86_64-linux-gnu/bits/mathdef.h ../headers//usr/include/getopt.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h

unassigned

../headers//usr/include/c++/4.9/bits/locale_facets.h ./jellyfish/fstream_default.hpp ../headers//usr/include/c++/4.9/bits/basic_ios.h ../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h ../headers//usr/include/c++/4.9/bits/deque.tcc ../headers//usr/include/c++/4.9/bits/stl_construct.h ./include/jellyfish/err.hpp ../headers//usr/include/c++/4.9/ostream ./sub_commands/dump_main_cmdline.hpp ../headers//usr/include/c++/4.9/streambuf ../headers//usr/include/c++/4.9/sstream ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/c++/4.9/ext/string_conversions.h ../headers//usr/include/c++/4.9/bits/basic_string.tcc

dump_main.cc

./include/jellyfish/mer_dna.hpp ./include/jellyfish/binary_dumper.hpp ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/istream ./include/jellyfish/text_dumper.hpp ../headers//usr/include/c++/4.9/bits/stl_deque.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ./include/jellyfish/json.h ../headers//usr/include/c++/4.9/fstream ./include/jellyfish/generic_file_header.hpp ./include/jellyfish/file_header.hpp ../headers//usr/include/x86_64-linux-gnu/bits/string3.h ../headers//usr/include/c++/4.9/bits/stl_vector.h ./include/jellyfish/rectangular_binary_matrix.hpp ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/stdlib.h ../headers//usr/include/c++/4.9/iostream ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/time.h ../headers//usr/include/x86_64-linux-gnu/sys/types.h ../headers//usr/include/stdint.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/include/wchar.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/type_traits ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/new ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/ostream.tcc ../headers//usr/include/c++/4.9/bits/istream.tcc ../headers//usr/include/c++/4.9/bits/postypes.h ../headers//usr/include/c++/4.9/limits ../headers//usr/include/c++/4.9/ctime ../headers//usr/include/c++/4.9/cstring ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/cmath ../headers//usr/include/c++/4.9/bits/stl_uninitialized.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/random.h ../headers//usr/include/c++/4.9/bits/uses_allocator.h ../headers//usr/include/c++/4.9/tuple ../headers//usr/include/c++/4.9/bits/shared_ptr_base.h ../headers//usr/include/c++/4.9/bits/ptr_traits.h ../headers//usr/include/c++/4.9/bits/alloc_traits.h ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/bits/stl_tree.h ../headers//usr/include/c++/4.9/bits/stl_map.h ../headers//usr/include/c++/4.9/bits/stl_function.h ../headers//usr/include/c++/4.9/bits/stl_stack.h ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/bits/move.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/bits/fstream.tcc ../headers//usr/include/c++/4.9/bits/ostream_insert.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/ext/concurrence.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ../headers//usr/include/string.h ./include/jellyfish/large_hash_iterator.hpp ./include/jellyfish/large_hash_array.hpp ./include/jellyfish/misc.hpp ./include/jellyfish/locks_pthread.hpp ./include/jellyfish/hash_counter.hpp ./include/jellyfish/offsets_key_value.hpp ./include/jellyfish/simple_circular_buffer.hpp ./include/jellyfish/mer_heap.hpp ./include/jellyfish/storage.hpp ../headers//usr/include/x86_64-linux-gnu/bits/mathdef.h ./include/jellyfish/atomic_gcc.hpp ./include/jellyfish/allocators_mmap.hpp ./include/jellyfish/divisor.hpp ./include/jellyfish/jellyfish.hpp ../headers//usr/include/getopt.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ../headers//usr/include/x86_64-linux-gnu/bits/errno.h ../headers//usr/include/ctype.h

unassigned

../headers//usr/include/c++/4.9/bits/locale_facets.h ./jellyfish/fstream_default.hpp ../headers//usr/include/c++/4.9/bits/basic_ios.h ../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h ../headers//usr/include/c++/4.9/bits/deque.tcc ../headers//usr/include/c++/4.9/bits/stl_construct.h ./include/jellyfish/err.hpp ../headers//usr/include/c++/4.9/ostream ../headers//usr/include/c++/4.9/ext/string_conversions.h ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/c++/4.9/sstream ../headers//usr/include/c++/4.9/streambuf ./sub_commands/histo_main_cmdline.hpp

histo_main.cc

./include/jellyfish/mer_dna.hpp ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/istream ./include/jellyfish/text_dumper.hpp ../headers//usr/include/c++/4.9/bits/stl_deque.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ./include/jellyfish/json.h ../headers//usr/include/c++/4.9/fstream ./include/jellyfish/generic_file_header.hpp ./include/jellyfish/file_header.hpp ../headers//usr/include/x86_64-linux-gnu/bits/string3.h ./include/jellyfish/binary_dumper.hpp ../headers//usr/include/c++/4.9/bits/stl_vector.h ./include/jellyfish/rectangular_binary_matrix.hpp ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/stdlib.h ../headers//usr/include/c++/4.9/iostream ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/time.h ../headers//usr/include/x86_64-linux-gnu/sys/types.h ../headers//usr/include/stdint.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/include/wchar.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/type_traits ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/new ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/ostream.tcc ../headers//usr/include/c++/4.9/bits/istream.tcc ../headers//usr/include/c++/4.9/bits/postypes.h ../headers//usr/include/c++/4.9/bits/stl_uninitialized.h ../headers//usr/include/c++/4.9/ctime ../headers//usr/include/c++/4.9/cstring ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/cmath ../headers//usr/include/c++/4.9/limits ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/random.h ../headers//usr/include/c++/4.9/bits/uses_allocator.h ../headers//usr/include/c++/4.9/tuple ../headers//usr/include/c++/4.9/bits/shared_ptr_base.h ../headers//usr/include/c++/4.9/bits/ptr_traits.h ../headers//usr/include/c++/4.9/bits/alloc_traits.h ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/bits/stl_tree.h ../headers//usr/include/c++/4.9/bits/stl_map.h ../headers//usr/include/c++/4.9/bits/stl_function.h ../headers//usr/include/c++/4.9/bits/stl_stack.h ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/bits/move.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/bits/fstream.tcc ../headers//usr/include/c++/4.9/bits/ostream_insert.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/ext/concurrence.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ../headers//usr/include/string.h ./include/jellyfish/large_hash_iterator.hpp ./include/jellyfish/large_hash_array.hpp ./include/jellyfish/misc.hpp ./include/jellyfish/locks_pthread.hpp ./include/jellyfish/hash_counter.hpp ./include/jellyfish/offsets_key_value.hpp ./include/jellyfish/simple_circular_buffer.hpp ./include/jellyfish/mer_heap.hpp ./include/jellyfish/storage.hpp ../headers//usr/include/x86_64-linux-gnu/bits/mathdef.h ./include/jellyfish/atomic_gcc.hpp ./include/jellyfish/allocators_mmap.hpp ./include/jellyfish/divisor.hpp ./include/jellyfish/jellyfish.hpp ../headers//usr/include/getopt.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ../headers//usr/include/x86_64-linux-gnu/bits/errno.h ../headers//usr/include/ctype.h

unassigned

../headers//usr/include/c++/4.9/bits/locale_facets.h ./jellyfish/fstream_default.hpp ../headers//usr/include/c++/4.9/bits/basic_ios.h ../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h ../headers//usr/include/c++/4.9/bits/deque.tcc ../headers//usr/include/c++/4.9/bits/stl_construct.h ./include/jellyfish/err.hpp ../headers//usr/include/c++/4.9/ostream ./sub_commands/stats_main_cmdline.hpp ../headers//usr/include/c++/4.9/streambuf ../headers//usr/include/c++/4.9/sstream ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/c++/4.9/ext/string_conversions.h ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/bits/stl_deque.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ./include/jellyfish/json.h

stats_main.cc

../headers//usr/include/c++/4.9/istream ../headers//usr/include/c++/4.9/fstream ./include/jellyfish/generic_file_header.hpp ./include/jellyfish/file_header.hpp ./include/jellyfish/binary_dumper.hpp ./include/jellyfish/mer_dna.hpp ../headers//usr/include/x86_64-linux-gnu/bits/string3.h ../headers//usr/include/c++/4.9/bits/stl_vector.h ./include/jellyfish/rectangular_binary_matrix.hpp ./include/jellyfish/text_dumper.hpp ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/stdlib.h ../headers//usr/include/c++/4.9/iostream ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/time.h ../headers//usr/include/x86_64-linux-gnu/sys/types.h ../headers//usr/include/stdint.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/include/wchar.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/type_traits ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/new ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/ostream.tcc ../headers//usr/include/c++/4.9/bits/istream.tcc ../headers//usr/include/c++/4.9/bits/postypes.h ../headers//usr/include/c++/4.9/ctime ../headers//usr/include/c++/4.9/cstring ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/cmath ../headers//usr/include/c++/4.9/limits ../headers//usr/include/c++/4.9/bits/stl_uninitialized.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/random.h ../headers//usr/include/c++/4.9/bits/uses_allocator.h ../headers//usr/include/c++/4.9/tuple ../headers//usr/include/c++/4.9/bits/shared_ptr_base.h ../headers//usr/include/c++/4.9/bits/ptr_traits.h ../headers//usr/include/c++/4.9/bits/alloc_traits.h ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/bits/stl_tree.h ../headers//usr/include/c++/4.9/bits/stl_map.h ../headers//usr/include/c++/4.9/bits/stl_function.h ../headers//usr/include/c++/4.9/bits/stl_stack.h ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/bits/move.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/bits/fstream.tcc ../headers//usr/include/c++/4.9/bits/ostream_insert.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/ext/concurrence.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ../headers//usr/include/string.h ./include/jellyfish/large_hash_iterator.hpp ./include/jellyfish/large_hash_array.hpp ./include/jellyfish/misc.hpp ./include/jellyfish/locks_pthread.hpp ./include/jellyfish/hash_counter.hpp ./include/jellyfish/offsets_key_value.hpp ./include/jellyfish/simple_circular_buffer.hpp ./include/jellyfish/mer_heap.hpp ./include/jellyfish/storage.hpp ../headers//usr/include/x86_64-linux-gnu/bits/mathdef.h ./include/jellyfish/atomic_gcc.hpp ./include/jellyfish/allocators_mmap.hpp ./include/jellyfish/divisor.hpp ./include/jellyfish/jellyfish.hpp ../headers//usr/include/getopt.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ../headers//usr/include/x86_64-linux-gnu/bits/errno.h ../headers//usr/include/ctype.h

unassigned

../headers//usr/include/c++/4.9/bits/locale_facets.h ./jellyfish/merge_files.hpp ../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h ./include/jellyfish/err.hpp ../headers//usr/include/c++/4.9/ostream ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/bits/stl_uninitialized.h ../headers//usr/include/c++/4.9/bits/stl_construct.h ./sub_commands/merge_main_cmdline.hpp ../headers//usr/include/c++/4.9/bits/basic_ios.h ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/c++/4.9/streambuf ../headers//usr/include/c++/4.9/sstream

merge_main.cc

./include/jellyfish/generic_file_header.hpp ../headers//usr/include/x86_64-linux-gnu/bits/unistd.h ../headers//usr/include/c++/4.9/stdexcept ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/type_traits ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/c++/4.9/new ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/ostream.tcc ../headers//usr/include/c++/4.9/ctime ../headers//usr/include/c++/4.9/bits/stl_tree.h ../headers//usr/include/c++/4.9/bits/uses_allocator.h ../headers//usr/include/c++/4.9/tuple ../headers//usr/include/c++/4.9/bits/stl_map.h ../headers//usr/include/c++/4.9/bits/ptr_traits.h ../headers//usr/include/c++/4.9/bits/alloc_traits.h ../headers//usr/include/c++/4.9/bits/stl_function.h ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/bits/postypes.h ../headers//usr/include/c++/4.9/cmath ../headers//usr/include/c++/4.9/limits ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/random.h ../headers//usr/include/c++/4.9/cstring ../headers//usr/include/c++/4.9/bits/shared_ptr_base.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/bits/move.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/bits/ostream_insert.h ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/concurrence.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/wchar.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/time.h ../headers//usr/include/stdint.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/sys/types.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/x86_64-linux-gnu/sys/utsname.h ../headers//usr/include/wctype.h ./include/jellyfish/json.h ./include/jellyfish/rectangular_binary_matrix.hpp ./include/jellyfish/file_header.hpp ../headers//usr/include/x86_64-linux-gnu/bits/mathdef.h ../headers//usr/include/string.h ../headers//usr/include/getopt.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ../headers//usr/include/c++/4.9/exception ../headers//usr/include/x86_64-linux-gnu/bits/errno.h ../headers//usr/include/ctype.h

unassigned

../headers//usr/include/c++/4.9/bits/locale_facets.h ./sub_commands/bc_main_cmdline.hpp ../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/ext/new_allocator.h

bc_main.cc

./include/jellyfish/generator_manager.hpp ../headers//usr/include/c++/4.9/bits/basic_ios.h ./include/jellyfish/circular_buffer.hpp ../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h ./include/jellyfish/divisor.hpp ../headers//usr/include/c++/4.9/ext/stdio_filebuf.h ../headers//usr/include/c++/4.9/fstream ../headers//usr/include/c++/4.9/streambuf ./include/jellyfish/stream_manager.hpp ./include/jellyfish/locks_pthread.hpp ./include/jellyfish/err.hpp ../headers//usr/include/c++/4.9/ostream ../headers//usr/include/c++/4.9/bits/stl_construct.h ./include/jellyfish/json.h ./include/jellyfish/generic_file_header.hpp ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/x86_64-linux-gnu/bits/unistd.h ../headers//usr/include/c++/4.9/sstream ./include/jellyfish/bloom_counter2.hpp ./include/jellyfish/rectangular_binary_matrix.hpp ./include/jellyfish/allocators_mmap.hpp ../headers//usr/include/c++/4.9/ext/string_conversions.h ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/c++/4.9/bits/stl_tree.h ../headers//usr/include/c++/4.9/bits/unique_ptr.h ../headers//usr/include/c++/4.9/bits/stl_map.h ./include/jellyfish/mer_dna.hpp ./include/jellyfish/bloom_common.hpp ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/c++/4.9/bits/stl_uninitialized.h ../headers//usr/include/c++/4.9/bits/stl_set.h ../headers//usr/include/c++/4.9/bits/list.tcc ./include/jellyfish/mer_overlap_sequence_parser.hpp ./include/jellyfish/cpp_array.hpp ../headers//usr/include/c++/4.9/bits/stl_tempbuf.h ./include/jellyfish/cooperative_pool2.hpp ./include/jellyfish/thread_exec.hpp ../headers//usr/include/c++/4.9/bits/stl_list.h ./include/jellyfish/atomic_field.hpp ./include/jellyfish/compare_and_swap.hpp ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/istream ../headers//usr/include/c++/4.9/bits/move.h ../headers//usr/include/x86_64-linux-gnu/bits/string3.h ./include/jellyfish/file_header.hpp ./include/jellyfish/mer_dna_bloom_counter.hpp ./include/jellyfish/misc.hpp ../headers//usr/include/c++/4.9/iomanip ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/tuple ../headers//usr/include/c++/4.9/chrono ../headers//usr/include/c++/4.9/new ./include/jellyfish/mer_iterator.hpp ./include/jellyfish/atomic_gcc.hpp ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/x86_64-linux-gnu/bits/sigset.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/signal.h ../headers//usr/include/x86_64-linux-gnu/bits/siginfo.h ../headers//usr/include/x86_64-linux-gnu/bits/sigaction.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/pthreadtypes.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/include/wchar.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/type_traits ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/bits/postypes.h ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/ostream.tcc ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/basic_file.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++io.h ../headers//usr/include/c++/4.9/limits ../headers//usr/include/c++/4.9/ctime ../headers//usr/include/c++/4.9/ratio ../headers//usr/include/c++/4.9/cstring ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/exception ../headers//usr/include/c++/4.9/bits/uses_allocator.h ../headers//usr/include/c++/4.9/bits/shared_ptr_base.h ../headers//usr/include/c++/4.9/cstddef ../headers//usr/include/c++/4.9/cmath ../headers//usr/include/c++/4.9/bits/random.h ../headers//usr/include/c++/4.9/bits/ptr_traits.h ../headers//usr/include/c++/4.9/bits/alloc_traits.h ../headers//usr/include/c++/4.9/bits/stl_function.h ../headers//usr/include/c++/4.9/bits/fstream.tcc ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/bits/ostream_insert.h ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/time.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/ext/concurrence.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/aligned_buffer.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/stdint.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/sys/types.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ../headers//usr/include/string.h ../headers//usr/include/x86_64-linux-gnu/bits/mathdef.h ../headers//usr/include/x86_64-linux-gnu/bits/fcntl-linux.h ../headers//usr/include/x86_64-linux-gnu/sys/utsname.h ../headers//usr/include/getopt.h ../headers//usr/include/unistd.h ../headers//usr/include/pthread.h ../headers//usr/include/x86_64-linux-gnu/bits/mathcalls.h ../headers//usr/include/x86_64-linux-gnu/bits/errno.h ../headers//usr/include/ctype.h ../headers//usr/include/assert.h

unassigned

../headers//usr/include/c++/4.9/bits/locale_facets.h ./sub_commands/query_main_cmdline.hpp ../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ./include/jellyfish/circular_buffer.hpp ./include/jellyfish/mapped_file.hpp ./jellyfish/fstream_default.hpp ../headers//usr/include/c++/4.9/bits/basic_ios.h ../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h ./include/jellyfish/divisor.hpp ./include/jellyfish/stream_manager.hpp ./include/jellyfish/locks_pthread.hpp ../headers//usr/include/c++/4.9/fstream ../headers//usr/include/c++/4.9/streambuf ./include/jellyfish/err.hpp ../headers//usr/include/c++/4.9/ostream ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/c++/4.9/bits/ios_base.h ./include/jellyfish/json.h ../headers//usr/include/c++/4.9/bits/stl_deque.h ../headers//usr/include/c++/4.9/bits/deque.tcc ../headers//usr/include/c++/4.9/bits/stl_construct.h ../headers//usr/include/c++/4.9/stdexcept ../headers//usr/include/c++/4.9/ext/string_conversions.h ../headers//usr/include/c++/4.9/bits/basic_string.tcc ./include/jellyfish/file_header.hpp ./include/jellyfish/rectangular_binary_matrix.hpp ../headers//usr/include/c++/4.9/bits/stl_algobase.h ./include/jellyfish/mer_dna.hpp

query_main.cc

../headers//usr/include/x86_64-linux-gnu/bits/string3.h ./include/jellyfish/mer_dna_bloom_counter.hpp ./include/jellyfish/bloom_counter2.hpp ./include/jellyfish/atomic_field.hpp ./include/jellyfish/mer_overlap_sequence_parser.hpp ./include/jellyfish/cpp_array.hpp ../headers//usr/include/c++/4.9/bits/unique_ptr.h ../headers//usr/include/c++/4.9/bits/stl_tempbuf.h ./include/jellyfish/cooperative_pool2.hpp ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/bits/stl_uninitialized.h ../headers//usr/include/c++/4.9/bits/stl_tree.h ../headers//usr/include/c++/4.9/bits/stl_set.h ../headers//usr/include/c++/4.9/bits/list.tcc ../headers//usr/include/c++/4.9/bits/stl_list.h ./include/jellyfish/compare_and_swap.hpp ./include/jellyfish/mer_iterator.hpp ../headers//usr/include/c++/4.9/istream ../headers//usr/include/c++/4.9/bits/move.h ../headers//usr/include/c++/4.9/sstream ./include/jellyfish/binary_dumper.hpp ../headers//usr/include/c++/4.9/tuple ../headers//usr/include/c++/4.9/new ./include/jellyfish/generic_file_header.hpp ./include/jellyfish/allocators_mmap.hpp ./include/jellyfish/bloom_common.hpp ../headers//usr/include/x86_64-linux-gnu/bits/fcntl2.h ../headers//usr/include/x86_64-linux-gnu/sys/stat.h ../headers//usr/include/stdlib.h ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/type_traits ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/ostream.tcc ../headers//usr/include/c++/4.9/ctime ../headers//usr/include/c++/4.9/cstring ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/exception ../headers//usr/include/c++/4.9/cmath ../headers//usr/include/c++/4.9/limits ../headers//usr/include/c++/4.9/bits/random.h ../headers//usr/include/c++/4.9/bits/uses_allocator.h ../headers//usr/include/c++/4.9/bits/stl_map.h ../headers//usr/include/c++/4.9/bits/ptr_traits.h ../headers//usr/include/c++/4.9/bits/alloc_traits.h ../headers//usr/include/c++/4.9/bits/stl_function.h ../headers//usr/include/c++/4.9/bits/stl_stack.h ../headers//usr/include/c++/4.9/bits/postypes.h ../headers//usr/include/c++/4.9/bits/shared_ptr_base.h ../headers//usr/include/c++/4.9/cstddef ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/bits/fstream.tcc ../headers//usr/include/c++/4.9/bits/ostream_insert.h ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/concurrence.h ../headers//usr/include/c++/4.9/ext/aligned_buffer.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/wchar.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/time.h ../headers//usr/include/stdint.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/bits/pthreadtypes.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ../headers//usr/include/string.h ./include/jellyfish/large_hash_iterator.hpp ./include/jellyfish/large_hash_array.hpp ./include/jellyfish/misc.hpp ./include/jellyfish/hash_counter.hpp ./include/jellyfish/offsets_key_value.hpp ./include/jellyfish/simple_circular_buffer.hpp ./include/jellyfish/mer_heap.hpp ./include/jellyfish/storage.hpp ../headers//usr/include/x86_64-linux-gnu/bits/mathdef.h ../headers//usr/include/x86_64-linux-gnu/bits/confname.h ./include/jellyfish/atomic_gcc.hpp ../headers//usr/include/x86_64-linux-gnu/bits/stat.h ../headers//usr/include/x86_64-linux-gnu/bits/fcntl-linux.h ./include/jellyfish/jellyfish.hpp ../headers//usr/include/getopt.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ../headers//usr/include/pthread.h ../headers//usr/include/x86_64-linux-gnu/bits/errno.h ../headers//usr/include/x86_64-linux-gnu/sys/mman.h ../headers//usr/include/x86_64-linux-gnu/bits/mathcalls.h ../headers//usr/include/unistd.h

unassigned

../headers//usr/include/c++/4.9/bits/locale_facets.h ./jellyfish/fstream_default.hpp ../headers//usr/include/c++/4.9/bits/basic_ios.h ../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h ./include/jellyfish/err.hpp ../headers//usr/include/c++/4.9/ostream

cite_main.cc

./sub_commands/cite_main_cmdline.hpp ../headers//usr/include/c++/4.9/streambuf ../headers//usr/include/c++/4.9/sstream ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/libio.h ../headers//usr/include/stdio.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/wchar.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/type_traits ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/new ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/ostream.tcc ../headers//usr/include/c++/4.9/bits/postypes.h ../headers//usr/include/c++/4.9/ctime ../headers//usr/include/c++/4.9/cstring ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/cmath ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/random.h ../headers//usr/include/c++/4.9/bits/uses_allocator.h ../headers//usr/include/c++/4.9/tuple ../headers//usr/include/c++/4.9/bits/shared_ptr_base.h ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/bits/fstream.tcc ../headers//usr/include/c++/4.9/fstream ../headers//usr/include/c++/4.9/bits/ostream_insert.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/time.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/ext/concurrence.h ../headers//usr/include/stdint.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ../headers//usr/include/string.h ../headers//usr/include/x86_64-linux-gnu/bits/mathdef.h ../headers//usr/include/getopt.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h

unassigned

../headers//usr/include/c++/4.9/bits/locale_facets.h ../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h ./include/jellyfish/divisor.hpp ../headers//usr/include/c++/4.9/sstream ../headers//usr/include/c++/4.9/streambuf ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/bits/stl_algobase.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/bits/stl_uninitialized.h ../headers//usr/include/c++/4.9/bits/stl_construct.h ./sub_commands/mem_main_cmdline.hpp ../headers//usr/include/c++/4.9/ostream ../headers//usr/include/c++/4.9/bits/basic_ios.h ../headers//usr/include/c++/4.9/bits/char_traits.h ./include/jellyfish/offsets_key_value.hpp ../headers//usr/include/x86_64-linux-gnu/bits/string3.h ./include/jellyfish/large_hash_array.hpp ./include/jellyfish/misc.hpp ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h

mem_main.cc

../headers//usr/include/c++/4.9/iostream ../headers//usr/include/libio.h ../headers//usr/include/stdio.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/wchar.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/type_traits ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/new ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/ostream.tcc ../headers//usr/include/c++/4.9/limits ../headers//usr/include/c++/4.9/cmath ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/random.h ../headers//usr/include/c++/4.9/cstring ../headers//usr/include/c++/4.9/ctime ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/bits/uses_allocator.h ../headers//usr/include/c++/4.9/tuple ../headers//usr/include/c++/4.9/bits/shared_ptr_base.h ../headers//usr/include/c++/4.9/bits/ptr_traits.h ../headers//usr/include/c++/4.9/bits/alloc_traits.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/bits/move.h ../headers//usr/include/c++/4.9/bits/ostream_insert.h ../headers//usr/include/c++/4.9/bits/postypes.h ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/time.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/ext/concurrence.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/stdint.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ../headers//usr/include/x86_64-linux-gnu/bits/mathdef.h ../headers//usr/include/string.h ./include/jellyfish/mer_dna.hpp ./include/jellyfish/rectangular_binary_matrix.hpp ./include/jellyfish/large_hash_iterator.hpp ./include/jellyfish/simple_circular_buffer.hpp ./include/jellyfish/storage.hpp ./include/jellyfish/atomic_gcc.hpp ./include/jellyfish/allocators_mmap.hpp ../headers//usr/include/getopt.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ../headers//usr/include/x86_64-linux-gnu/bits/errno.h ../headers//usr/include/ctype.h ./include/jellyfish/err.hpp

unassigned

../headers//usr/include/c++/4.9/bits/locale_facets.h ./jellyfish/merge_files.hpp ../headers//usr/include/c++/4.9/bits/basic_string.h ../headers//usr/include/c++/4.9/ext/atomicity.h ../headers//usr/include/c++/4.9/bits/deque.tcc ../headers//usr/include/c++/4.9/bits/stl_construct.h ../headers//usr/include/c++/4.9/bits/stl_heap.h ./include/jellyfish/mer_dna.hpp ./include/jellyfish/mer_heap.hpp ./include/jellyfish/json.h ./include/jellyfish/generic_file_header.hpp ../headers//usr/include/c++/4.9/bits/ios_base.h ../headers//usr/include/c++/4.9/bits/basic_ios.h ../headers//usr/include/c++/4.9/sstream ../headers//usr/include/c++/4.9/streambuf ./include/jellyfish/cpp_array.hpp ../headers//usr/include/c++/4.9/istream ../headers//usr/include/c++/4.9/fstream ../headers//usr/include/c++/4.9/bits/stl_tempbuf.h ../headers//usr/include/c++/4.9/bits/stl_deque.h ../headers//usr/include/c++/4.9/ext/new_allocator.h ../headers//usr/include/c++/4.9/bits/basic_string.tcc ../headers//usr/include/c++/4.9/bits/stl_iterator_base_funcs.h ../headers//usr/include/c++/4.9/bits/char_traits.h ../headers//usr/include/c++/4.9/ext/string_conversions.h ./include/jellyfish/rectangular_binary_matrix.hpp

merge_files.cc

../headers//usr/include/x86_64-linux-gnu/bits/string3.h ./include/jellyfish/binary_dumper.hpp ./include/jellyfish/file_header.hpp ../headers//usr/include/c++/4.9/bits/stl_vector.h ../headers//usr/include/c++/4.9/new ../headers//usr/include/c++/4.9/bits/stl_algobase.h ./include/jellyfish/text_dumper.hpp ../headers//usr/include/c++/4.9/ostream ../headers//usr/include/c++/4.9/backward/auto_ptr.h ../headers//usr/include/c++/4.9/bits/move.h ../headers//usr/include/c++/4.9/iomanip ./include/jellyfish/err.hpp ../headers//usr/include/stdlib.h ../headers//usr/include/c++/4.9/iostream ../headers//usr/include/c++/4.9/bits/cpp_type_traits.h ../headers//usr/include/c++/4.9/type_traits ../headers//usr/include/c++/4.9/bits/stl_pair.h ../headers//usr/include/c++/4.9/bits/stl_iterator_base_types.h ../headers//usr/include/c++/4.9/bits/exception_ptr.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/c++config.h ../headers//usr/include/c++/4.9/bits/allocator.h ../headers//usr/include/c++/4.9/bits/stl_uninitialized.h ../headers//usr/include/c++/4.9/cwchar ../headers//usr/include/c++/4.9/cstdint ../headers//usr/include/c++/4.9/clocale ../headers//usr/include/c++/4.9/cstdlib ../headers//usr/include/c++/4.9/cstdio ../headers//usr/include/c++/4.9/initializer_list ../headers//usr/include/c++/4.9/bits/stringfwd.h ../headers//usr/include/c++/4.9/cwctype ../headers//usr/include/c++/4.9/bits/ostream.tcc ../headers//usr/include/c++/4.9/bits/istream.tcc ../headers//usr/include/c++/4.9/ctime ../headers//usr/include/c++/4.9/cstring ../headers//usr/include/c++/4.9/iosfwd ../headers//usr/include/c++/4.9/exception ../headers//usr/include/c++/4.9/bits/stl_tree.h ../headers//usr/include/c++/4.9/bits/uses_allocator.h ../headers//usr/include/c++/4.9/tuple ../headers//usr/include/c++/4.9/bits/stl_map.h ../headers//usr/include/c++/4.9/bits/vector.tcc ../headers//usr/include/c++/4.9/bits/ptr_traits.h ../headers//usr/include/c++/4.9/bits/alloc_traits.h ../headers//usr/include/c++/4.9/bits/stl_function.h ../headers//usr/include/c++/4.9/bits/stl_stack.h ../headers//usr/include/c++/4.9/bits/postypes.h ../headers//usr/include/c++/4.9/cmath ../headers//usr/include/c++/4.9/limits ../headers//usr/include/c++/4.9/debug/debug.h ../headers//usr/include/c++/4.9/bits/random.h ../headers//usr/include/c++/4.9/bits/shared_ptr_base.h ../headers//usr/include/c++/4.9/cstddef ../headers//usr/include/c++/4.9/bits/basic_ios.tcc ../headers//usr/include/c++/4.9/bits/fstream.tcc ../headers//usr/include/c++/4.9/bits/functexcept.h ../headers//usr/include/c++/4.9/bits/ostream_insert.h ../headers//usr/include/c++/4.9/bits/predefined_ops.h ../headers//usr/include/c++/4.9/ext/numeric_traits.h ../headers//usr/include/c++/4.9/bits/stl_iterator.h ../headers//usr/include/c++/4.9/ext/alloc_traits.h ../headers//usr/include/c++/4.9/ext/concurrence.h ../headers//usr/include/c++/4.9/ext/type_traits.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/wchar.h ../headers//usr/include/x86_64-linux-gnu/bits/wchar2.h ../headers//usr/include/time.h ../headers//usr/include/stdint.h ../headers//usr/include/locale.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/atomic_word.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-float.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h ../headers//usr/include/x86_64-linux-gnu/bits/stdlib.h ../headers//usr/include/_G_config.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio2.h ../headers//usr/include/x86_64-linux-gnu/bits/stdio.h ../headers//usr/include/wctype.h ../headers//usr/include/string.h ./include/jellyfish/large_hash_iterator.hpp ./include/jellyfish/large_hash_array.hpp ./include/jellyfish/misc.hpp ./include/jellyfish/locks_pthread.hpp ./include/jellyfish/hash_counter.hpp ./include/jellyfish/offsets_key_value.hpp ./include/jellyfish/simple_circular_buffer.hpp ./include/jellyfish/storage.hpp ../headers//usr/include/x86_64-linux-gnu/bits/mathdef.h ./include/jellyfish/atomic_gcc.hpp ./include/jellyfish/allocators_mmap.hpp ./include/jellyfish/divisor.hpp ./include/jellyfish/jellyfish.hpp ../headers//usr/include/x86_64-linux-gnu/c++/4.9/bits/gthr-default.h ../headers//usr/include/ctype.h