glam2 - amd64

alphabet.c

Gimple

./alphabet.c.004t.gimple

GKD

./alphabet.o.gkd

OBJ

obj: ./alphabet.o

args.c

Gimple

./args.c.004t.gimple

GKD

./args.o.gkd

OBJ

obj: ./args.o

column_sample.c

Gimple

./column_sample.c.004t.gimple

GKD

./column_sample.o.gkd

OBJ

obj: ./column_sample.o

dirichlet.c

Gimple

./dirichlet.c.004t.gimple

GKD

./dirichlet.o.gkd

OBJ

obj: ./dirichlet.o

dna_prior.c

Gimple

./dna_prior.c.004t.gimple

GKD

./dna_prior.o.gkd

OBJ

obj: ./dna_prior.o

fasta.c

Gimple

./fasta.c.004t.gimple

GKD

./fasta.o.gkd

OBJ

obj: ./fasta.o

glam2.c

Gimple

./glam2.c.004t.gimple

GKD

./glam2.o.gkd

OBJ

obj: ./glam2.o

glam2_aln.c

Gimple

./glam2_aln.c.004t.gimple

GKD

./glam2_aln.o.gkd

OBJ

obj: ./glam2_aln.o

init.c

Gimple

./init.c.004t.gimple

GKD

./init.o.gkd

OBJ

obj: ./init.o

output.c

Gimple

./output.c.004t.gimple

GKD

./output.o.gkd

OBJ

obj: ./output.o

recode3_20comp.c

Gimple

./recode3_20comp.c.004t.gimple

GKD

./recode3_20comp.o.gkd

OBJ

obj: ./recode3_20comp.o

site_sample.c

Gimple

./site_sample.c.004t.gimple

GKD

./site_sample.o.gkd

OBJ

obj: ./site_sample.o

util.c

Gimple

./util.c.004t.gimple

GKD

./util.o.gkd

OBJ

obj: ./util.o

includes

alphabet.c

../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./alphabet.h ./util.h ../headers//usr/include/ctype.h ../headers//usr/include/x86_64-linux-gnu/bits/errno.h ../headers//usr/include/string.h ../headers//usr/include/stdlib.h ../headers//usr/include/assert.h

args.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./args.h ../headers//usr/include/getopt.h ./util.h

column_sample.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./alphabet.h ./fasta.h ./dirichlet.h ./args.h ./glam2_aln.h ./glam2.h ../headers//usr/include/assert.h ./util.h

dirichlet.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./dirichlet.h ./util.h ../headers//usr/include/assert.h ../headers//usr/include/stdlib.h ../headers//usr/include/string.h ../headers//usr/include/x86_64-linux-gnu/bits/errno.h

dna_prior.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/libio.h ./dirichlet.h ../headers//usr/include/stdio.h

fasta.c

../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./fasta.h ./util.h ../headers//usr/include/string.h ../headers//usr/include/assert.h ../headers//usr/include/ctype.h ../headers//usr/include/x86_64-linux-gnu/bits/errno.h ../headers//usr/include/stdlib.h

glam2.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/include/stdlib.h ./alphabet.h ./fasta.h ./dirichlet.h ./args.h ./glam2_aln.h ./glam2.h ./util.h ../headers//usr/include/assert.h ./site_sample.h ./column_sample.h ./output.h ./init.h

glam2_aln.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/libio.h ./glam2_aln.h ../headers//usr/include/stdio.h ./util.h ../headers//usr/include/assert.h

init.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./dirichlet.h ./alphabet.h ./fasta.h ./args.h ./glam2_aln.h ./glam2.h ./util.h ../headers//usr/include/assert.h ./dna_prior.h ./recode3_20comp.h ../headers//usr/include/stdlib.h

output.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./alphabet.h ./fasta.h ./dirichlet.h ./args.h ./glam2_aln.h ./glam2.h ./util.h ../headers//usr/include/stdlib.h

recode3_20comp.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/libio.h ./dirichlet.h ../headers//usr/include/stdio.h

site_sample.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./alphabet.h ./fasta.h ./dirichlet.h ./args.h ./glam2_aln.h ./glam2.h ./util.h ../headers//usr/include/assert.h

util.c

../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stdarg.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/stdlib.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/include/assert.h ../headers//usr/include/x86_64-linux-gnu/bits/errno.h ../headers//usr/include/string.h ../headers//usr/include/x86_64-linux-gnu/bits/mathcalls.h ../headers//usr/include/ctype.h

alphabet.c

Gimple

./alphabet.c.004t.gimple

GKD

./alphabet.o.gkd

OBJ

obj: ./alphabet.o

args.c

Gimple

./args.c.004t.gimple

GKD

./args.o.gkd

OBJ

obj: ./args.o

column_sample.c

Gimple

./column_sample.c.004t.gimple

GKD

./column_sample.o.gkd

OBJ

obj: ./column_sample.o

dirichlet.c

Gimple

./dirichlet.c.004t.gimple

GKD

./dirichlet.o.gkd

OBJ

obj: ./dirichlet.o

dna_prior.c

Gimple

./dna_prior.c.004t.gimple

GKD

./dna_prior.o.gkd

OBJ

obj: ./dna_prior.o

fasta.c

Gimple

./fasta.c.004t.gimple

GKD

./fasta.o.gkd

OBJ

obj: ./fasta.o

glam2.c

Gimple

./glam2.c.004t.gimple

GKD

./glam2.o.gkd

OBJ

obj: ./glam2.o

glam2_aln.c

Gimple

./glam2_aln.c.004t.gimple

GKD

./glam2_aln.o.gkd

OBJ

obj: ./glam2_aln.o

init.c

Gimple

./init.c.004t.gimple

GKD

./init.o.gkd

OBJ

obj: ./init.o

output.c

Gimple

./output.c.004t.gimple

GKD

./output.o.gkd

OBJ

obj: ./output.o

recode3_20comp.c

Gimple

./recode3_20comp.c.004t.gimple

GKD

./recode3_20comp.o.gkd

OBJ

obj: ./recode3_20comp.o

site_sample.c

Gimple

./site_sample.c.004t.gimple

GKD

./site_sample.o.gkd

OBJ

obj: ./site_sample.o

util.c

Gimple

./util.c.004t.gimple

GKD

./util.o.gkd

OBJ

obj: ./util.o

convolve.c

Gimple

./convolve.c.004t.gimple

GKD

./convolve.o.gkd

OBJ

obj: ./convolve.o

includes

alphabet.c

../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./alphabet.h ./util.h ../headers//usr/include/ctype.h ../headers//usr/include/x86_64-linux-gnu/bits/errno.h ../headers//usr/include/string.h ../headers//usr/include/stdlib.h ../headers//usr/include/assert.h

args.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./args.h ../headers//usr/include/getopt.h ./util.h

column_sample.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./alphabet.h ./fasta.h ./dirichlet.h ./args.h ./glam2_aln.h ../headers//usr/include/fftw3.h ./convolve.h ./glam2.h ../headers//usr/include/assert.h ./util.h

dirichlet.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./dirichlet.h ./util.h ../headers//usr/include/assert.h ../headers//usr/include/stdlib.h ../headers//usr/include/string.h ../headers//usr/include/x86_64-linux-gnu/bits/errno.h

dna_prior.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/libio.h ./dirichlet.h ../headers//usr/include/stdio.h

fasta.c

../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./fasta.h ./util.h ../headers//usr/include/string.h ../headers//usr/include/assert.h ../headers//usr/include/ctype.h ../headers//usr/include/x86_64-linux-gnu/bits/errno.h ../headers//usr/include/stdlib.h

glam2.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/include/stdlib.h ./alphabet.h ./fasta.h ./dirichlet.h ./args.h ./glam2_aln.h ../headers//usr/include/fftw3.h ./convolve.h ./glam2.h ./util.h ../headers//usr/include/assert.h ./site_sample.h ./column_sample.h ./output.h ./init.h

glam2_aln.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/libio.h ./glam2_aln.h ../headers//usr/include/stdio.h ./util.h ../headers//usr/include/assert.h

init.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./dirichlet.h ./alphabet.h ./fasta.h ./args.h ./glam2_aln.h ../headers//usr/include/fftw3.h ./convolve.h ./glam2.h ./util.h ../headers//usr/include/assert.h ./dna_prior.h ./recode3_20comp.h ../headers//usr/include/stdlib.h

output.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./alphabet.h ./fasta.h ./dirichlet.h ./args.h ./glam2_aln.h ../headers//usr/include/fftw3.h ./convolve.h ./glam2.h ./util.h ../headers//usr/include/stdlib.h

recode3_20comp.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/libio.h ./dirichlet.h ../headers//usr/include/stdio.h

site_sample.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./alphabet.h ./fasta.h ./dirichlet.h ./args.h ./glam2_aln.h ../headers//usr/include/fftw3.h ./convolve.h ./glam2.h ./util.h ../headers//usr/include/assert.h

util.c

../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stdarg.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/stdlib.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/include/assert.h ../headers//usr/include/x86_64-linux-gnu/bits/errno.h ../headers//usr/include/string.h ../headers//usr/include/x86_64-linux-gnu/bits/mathcalls.h ../headers//usr/include/ctype.h

convolve.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/libio.h ../headers//usr/include/fftw3.h ./convolve.h ../headers//usr/include/stdio.h ./util.h ../headers//usr/include/string.h ../headers//usr/include/assert.h ../headers//usr/include/x86_64-linux-gnu/bits/errno.h

glam2mask.c

Gimple

./glam2mask.c.004t.gimple

GKD

./glam2mask.o.gkd

OBJ

obj: ./glam2mask.o

alignment.c

Gimple

./alignment.c.004t.gimple

GKD

./alignment.o.gkd

OBJ

obj: ./alignment.o

fasta.c

Gimple

./fasta.c.004t.gimple

GKD

./fasta.o.gkd

OBJ

obj: ./fasta.o

util.c

Gimple

./util.c.004t.gimple

GKD

./util.o.gkd

OBJ

obj: ./util.o

includes

glam2mask.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./fasta.h ./alignment.h ../headers//usr/include/getopt.h ./util.h ../headers//usr/include/stdlib.h

alignment.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./alignment.h ../headers//usr/include/string.h ./util.h ../headers//usr/include/stdlib.h

fasta.c

../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./fasta.h ./util.h ../headers//usr/include/string.h ../headers//usr/include/assert.h ../headers//usr/include/ctype.h ../headers//usr/include/x86_64-linux-gnu/bits/errno.h ../headers//usr/include/stdlib.h

util.c

../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stdarg.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/stdlib.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/include/assert.h ../headers//usr/include/x86_64-linux-gnu/bits/errno.h ../headers//usr/include/string.h ../headers//usr/include/x86_64-linux-gnu/bits/mathcalls.h ../headers//usr/include/ctype.h

afnio.c

Gimple

./afnio.c.004t.gimple

GKD

./afnio.o.gkd

OBJ

obj: ./afnio.o

alphabet.c

Gimple

./alphabet.c.004t.gimple

GKD

./alphabet.o.gkd

OBJ

obj: ./alphabet.o

block.c

Gimple

./block.c.004t.gimple

GKD

./block.o.gkd

OBJ

obj: ./block.o

dheap.c

Gimple

./dheap.c.004t.gimple

GKD

./dheap.o.gkd

OBJ

obj: ./dheap.o

gblast.c

Gimple

./gblast.c.004t.gimple

GKD

./gblast.o.gkd

OBJ

obj: ./gblast.o

karlin.c

Gimple

./karlin.c.004t.gimple

GKD

./karlin.o.gkd

OBJ

obj: ./karlin.o

mheap.c

Gimple

./mheap.c.004t.gimple

GKD

./mheap.o.gkd

OBJ

obj: ./mheap.o

mlist.c

Gimple

./mlist.c.004t.gimple

GKD

./mlist.o.gkd

OBJ

obj: ./mlist.o

pairaln.c

Gimple

./pairaln.c.004t.gimple

GKD

./pairaln.o.gkd

OBJ

obj: ./pairaln.o

pmain.c

Gimple

./pmain.c.004t.gimple

GKD

./pmain.o.gkd

OBJ

obj: ./pmain.o

purge.c

Gimple

./purge.c.004t.gimple

GKD

./purge.o.gkd

OBJ

obj: ./purge.o

random.c

Gimple

./random.c.004t.gimple

GKD

./random.o.gkd

OBJ

obj: ./random.o

seqset.c

Gimple

./seqset.c.004t.gimple

GKD

./seqset.o.gkd

OBJ

obj: ./seqset.o

sequence.c

Gimple

./sequence.c.004t.gimple

GKD

./sequence.o.gkd

OBJ

obj: ./sequence.o

includes

afnio.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/include/string.h ../headers//usr/include/stdlib.h ../headers//usr/include/ctype.h

alphabet.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./alphabet.h ../headers//usr/include/string.h ../headers//usr/include/stdlib.h ../headers//usr/include/ctype.h

block.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./block.h ../headers//usr/include/stdlib.h

dheap.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./dheap.h ../headers//usr/include/stdlib.h

gblast.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/time.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./alphabet.h ./dheap.h ./sequence.h ./mlist.h ./gblast.h ../headers//usr/include/stdlib.h

karlin.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./alphabet.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/bits/mathcalls.h

mheap.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/libio.h ./dheap.h ./mheap.h ../headers//usr/include/stdio.h ../headers//usr/include/stdlib.h

mlist.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./mlist.h ../headers//usr/include/stdlib.h

pairaln.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./alphabet.h ./dheap.h ./sequence.h ./mheap.h ../headers//usr/include/stdlib.h ./pairaln.h

pmain.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./alphabet.h ./sequence.h ./seqset.h ./purge.h ../headers//usr/include/stdlib.h

purge.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./block.h ./alphabet.h ./dheap.h ./sequence.h ./seqset.h ./mlist.h ./gblast.h ../headers//usr/include/stdlib.h ./pairaln.h ./afnio.h

random.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/libio.h ../headers//usr/include/stdio.h

seqset.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./alphabet.h ./dheap.h ./sequence.h ./seqset.h ../headers//usr/include/stdlib.h ./afnio.h ./karlin.h ../headers//usr/include/string.h ../headers//usr/include/ctype.h ./random.h ../headers//usr/include/x86_64-linux-gnu/bits/mathcalls.h

sequence.c

../headers//usr/include/ctype.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./alphabet.h ./dheap.h ./sequence.h ../headers//usr/include/stdlib.h ./random.h ../headers//usr/include/string.h

afnio.c

Gimple

./afnio.c.004t.gimple

GKD

./afnio.o.gkd

OBJ

obj: ./afnio.o

alphabet.c

Gimple

./alphabet.c.004t.gimple

GKD

./alphabet.o.gkd

OBJ

obj: ./alphabet.o

block.c

Gimple

./block.c.004t.gimple

GKD

./block.o.gkd

OBJ

obj: ./block.o

dheap.c

Gimple

./dheap.c.004t.gimple

GKD

./dheap.o.gkd

OBJ

obj: ./dheap.o

gblast.c

Gimple

./gblast.c.004t.gimple

GKD

./gblast.o.gkd

OBJ

obj: ./gblast.o

karlin.c

Gimple

./karlin.c.004t.gimple

GKD

./karlin.o.gkd

OBJ

obj: ./karlin.o

mheap.c

Gimple

./mheap.c.004t.gimple

GKD

./mheap.o.gkd

OBJ

obj: ./mheap.o

mlist.c

Gimple

./mlist.c.004t.gimple

GKD

./mlist.o.gkd

OBJ

obj: ./mlist.o

pairaln.c

Gimple

./pairaln.c.004t.gimple

GKD

./pairaln.o.gkd

OBJ

obj: ./pairaln.o

pmain.c

Gimple

./pmain.c.004t.gimple

GKD

./pmain.o.gkd

OBJ

obj: ./pmain.o

purge.c

Gimple

./purge.c.004t.gimple

GKD

./purge.o.gkd

OBJ

obj: ./purge.o

random.c

Gimple

./random.c.004t.gimple

GKD

./random.o.gkd

OBJ

obj: ./random.o

seqset.c

Gimple

./seqset.c.004t.gimple

GKD

./seqset.o.gkd

OBJ

obj: ./seqset.o

sequence.c

Gimple

./sequence.c.004t.gimple

GKD

./sequence.o.gkd

OBJ

obj: ./sequence.o

includes

afnio.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/include/string.h ../headers//usr/include/stdlib.h ../headers//usr/include/ctype.h

alphabet.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./alphabet.h ../headers//usr/include/string.h ../headers//usr/include/stdlib.h ../headers//usr/include/ctype.h

block.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./block.h ../headers//usr/include/stdlib.h

dheap.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./dheap.h ../headers//usr/include/stdlib.h

gblast.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/time.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./alphabet.h ./dheap.h ./sequence.h ./mlist.h ./gblast.h ../headers//usr/include/stdlib.h

karlin.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./alphabet.h ../headers//usr/include/stdlib.h ../headers//usr/include/x86_64-linux-gnu/bits/mathcalls.h

mheap.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/libio.h ./dheap.h ./mheap.h ../headers//usr/include/stdio.h ../headers//usr/include/stdlib.h

mlist.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./mlist.h ../headers//usr/include/stdlib.h

pairaln.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./alphabet.h ./dheap.h ./sequence.h ./mheap.h ../headers//usr/include/stdlib.h ./pairaln.h

pmain.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./alphabet.h ./sequence.h ./seqset.h ./purge.h ../headers//usr/include/stdlib.h

purge.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./block.h ./alphabet.h ./dheap.h ./sequence.h ./seqset.h ./mlist.h ./gblast.h ../headers//usr/include/stdlib.h ./pairaln.h ./afnio.h

random.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/libio.h ../headers//usr/include/stdio.h

seqset.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./alphabet.h ./dheap.h ./sequence.h ./seqset.h ../headers//usr/include/stdlib.h ./afnio.h ./karlin.h ../headers//usr/include/string.h ../headers//usr/include/ctype.h ./random.h ../headers//usr/include/x86_64-linux-gnu/bits/mathcalls.h

sequence.c

../headers//usr/include/ctype.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./alphabet.h ./dheap.h ./sequence.h ../headers//usr/include/stdlib.h ./random.h ../headers//usr/include/string.h

glam2format.c

Gimple

./glam2format.c.004t.gimple

GKD

./glam2format.o.gkd

OBJ

obj: ./glam2format.o

alignment.c

Gimple

./alignment.c.004t.gimple

GKD

./alignment.o.gkd

OBJ

obj: ./alignment.o

fasta.c

Gimple

./fasta.c.004t.gimple

GKD

./fasta.o.gkd

OBJ

obj: ./fasta.o

util.c

Gimple

./util.c.004t.gimple

GKD

./util.o.gkd

OBJ

obj: ./util.o

includes

glam2format.c

../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./fasta.h ./alignment.h ../headers//usr/include/getopt.h ./util.h ../headers//usr/include/assert.h ../headers//usr/include/string.h ../headers//usr/include/stdlib.h ../headers//usr/include/ctype.h

alignment.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./alignment.h ../headers//usr/include/string.h ./util.h ../headers//usr/include/stdlib.h

fasta.c

../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./fasta.h ./util.h ../headers//usr/include/string.h ../headers//usr/include/assert.h ../headers//usr/include/ctype.h ../headers//usr/include/x86_64-linux-gnu/bits/errno.h ../headers//usr/include/stdlib.h

util.c

../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stdarg.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/stdlib.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/include/assert.h ../headers//usr/include/x86_64-linux-gnu/bits/errno.h ../headers//usr/include/string.h ../headers//usr/include/x86_64-linux-gnu/bits/mathcalls.h ../headers//usr/include/ctype.h

alphabet.c

Gimple

./alphabet.c.004t.gimple

GKD

./alphabet.o.gkd

OBJ

obj: ./alphabet.o

scan_args.c

Gimple

./scan_args.c.004t.gimple

GKD

./scan_args.o.gkd

OBJ

obj: ./scan_args.o

dirichlet.c

Gimple

./dirichlet.c.004t.gimple

GKD

./dirichlet.o.gkd

OBJ

obj: ./dirichlet.o

dna_prior.c

Gimple

./dna_prior.c.004t.gimple

GKD

./dna_prior.o.gkd

OBJ

obj: ./dna_prior.o

fasta.c

Gimple

./fasta.c.004t.gimple

GKD

./fasta.o.gkd

OBJ

obj: ./fasta.o

scan.c

Gimple

./scan.c.004t.gimple

GKD

./scan.o.gkd

OBJ

obj: ./scan.o

scan_init.c

Gimple

./scan_init.c.004t.gimple

GKD

./scan_init.o.gkd

OBJ

obj: ./scan_init.o

scan_output.c

Gimple

./scan_output.c.004t.gimple

GKD

./scan_output.o.gkd

OBJ

obj: ./scan_output.o

recode3_20comp.c

Gimple

./recode3_20comp.c.004t.gimple

GKD

./recode3_20comp.o.gkd

OBJ

obj: ./recode3_20comp.o

util.c

Gimple

./util.c.004t.gimple

GKD

./util.o.gkd

OBJ

obj: ./util.o

heap.c

Gimple

./heap.c.004t.gimple

GKD

./heap.o.gkd

OBJ

obj: ./heap.o

motif.c

Gimple

./motif.c.004t.gimple

GKD

./motif.o.gkd

OBJ

obj: ./motif.o

alignment.c

Gimple

./alignment.c.004t.gimple

GKD

./alignment.o.gkd

OBJ

obj: ./alignment.o

includes

alphabet.c

../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./alphabet.h ./util.h ../headers//usr/include/ctype.h ../headers//usr/include/x86_64-linux-gnu/bits/errno.h ../headers//usr/include/string.h ../headers//usr/include/stdlib.h ../headers//usr/include/assert.h

scan_args.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./scan_args.h ../headers//usr/include/getopt.h ./util.h

dirichlet.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./dirichlet.h ./util.h ../headers//usr/include/assert.h ../headers//usr/include/stdlib.h ../headers//usr/include/string.h ../headers//usr/include/x86_64-linux-gnu/bits/errno.h

dna_prior.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/libio.h ./dirichlet.h ../headers//usr/include/stdio.h

fasta.c

../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./fasta.h ./util.h ../headers//usr/include/string.h ../headers//usr/include/assert.h ../headers//usr/include/ctype.h ../headers//usr/include/x86_64-linux-gnu/bits/errno.h ../headers//usr/include/stdlib.h

scan.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdlib.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./alphabet.h ./fasta.h ./dirichlet.h ./motif.h ./scan_args.h ./scan.h ./util.h ../headers//usr/include/assert.h ./heap.h ./scan_init.h ./scan_output.h

scan_init.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./dirichlet.h ./alphabet.h ./fasta.h ./motif.h ./scan_args.h ./scan.h ./util.h ../headers//usr/include/assert.h ./dna_prior.h ./recode3_20comp.h

scan_output.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./alphabet.h ./fasta.h ./dirichlet.h ./motif.h ./scan_args.h ./scan.h ./util.h

recode3_20comp.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/libio.h ./dirichlet.h ../headers//usr/include/stdio.h

util.c

../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stdarg.h ../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/stdlib.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ../headers//usr/include/assert.h ../headers//usr/include/x86_64-linux-gnu/bits/errno.h ../headers//usr/include/string.h ../headers//usr/include/x86_64-linux-gnu/bits/mathcalls.h ../headers//usr/include/ctype.h

heap.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/libio.h ../headers//usr/include/stdio.h ./util.h

motif.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./alignment.h ./motif.h ./util.h ../headers//usr/include/string.h ../headers//usr/include/assert.h

alignment.c

../headers//usr/lib/gcc/x86_64-linux-gnu/4.9/include/stddef.h ../headers//usr/include/x86_64-linux-gnu/bits/types.h ../headers//usr/include/stdio.h ../headers//usr/include/libio.h ./alignment.h ../headers//usr/include/string.h ./util.h ../headers//usr/include/stdlib.h