garlic - amd64

Documentation

Binaries

garlic

compile units

includes

garlic.c

print_usage.c

print_help.c

print_version.c

register.c

alloc_gui.c

alloc_config.c

alloc_mol_complex.c

free_memory.c

display_init.c

disp_color_cap.c

color_shifts.c

calc_params.c

errmsg.c

warnmsg.c

openfile_r.c

read_config.c

open_config_file.c

extract_int.c

ex2ints.c

extract_double.c

ex2doubles.c

extract_phrase.c

extract_index.c

ex_rot_steps.c

ex_trans_steps.c

ex_slab_steps.c

ex_fading_steps.c

extract_args.c

parse_options.c

parse_color.c

load_font.c

prepare_cursor.c

print_config.c

create_windows.c

garlic.xpm

control.xpm

small_arrows.xpm

make_pixmap.c

make_pixmap2.c

rgbs_from_xcolor.c

pixel_from_rgbs.c

size_hints.c

wmhints.c

select_events.c

hide_control.c

load_complex.c

read_file.c

fileformat.c

is_pdb.c

read_pdb.c

init_header.c

pdb_atom.c

extract_field.c

copypur.c

realloc_pdb.c

headerline.c

geomcenter.c

init_slab.c

init_fading.c

flip_vector.c

translate_complex.c

extent.c

stereo_data.c

strong_bonds.c

pseudo_bonds.c

check_dist.c

add_bond.c

event_loop.c

alloc_nearest.c

init_nearest.c

main_refresh.c

key_press.c

rotation_angle.c

rotate.c

translation_shift.c

translate.c

slab_shift.c

move_back_slab.c

move_front_slab.c

fading_shift.c

move_back_fading.c

move_front_fading.c

key_release.c

refresh_pixmap.c

slab.c

no_slab.c

planar_slab.c

sphere_slab.c

half_sphere_slab.c

cylin_slab.c

half_cylin_slab.c

project_atoms.c

fading.c

prepare_color.c

no_fading.c

planar_fading.c

sphere_fading.c

half_sphere_fading.c

cylin_fading.c

half_cylin_fading.c

reset_pos_flag.c

atoms_style1.c

atoms_style2.c

atoms_style3.c

atoms_style4.c

atoms_style5.c

atoms_style6.c

atoms_style7.c

bonds_style1.c

bond_style1_quad1.c

bond_style1_quad2.c

bond_style1_quad3.c

bond_style1_quad4.c

bonds_style2.c

bond_style2_quad1.c

bond_style2_quad2.c

bond_style2_quad3.c

bond_style2_quad4.c

bonds_style3.c

interpolate_color.c

bond_style3_quad1.c

bond_style3_quad2.c

bond_style3_quad3.c

bond_style3_quad4.c

bonds_style4.c

add_two_colors.c

bond_style4_quad1.c

bond_style4_quad2.c

bond_style4_quad3.c

bond_style4_quad4.c

bonds_style5.c

add_three_colors.c

bond_style5_quad1.c

bond_style5_quad2.c

bond_style5_quad3.c

bond_style5_quad4.c

draw_system.c

system.xpm

motion_notify.c

assign_hyphob.c

control_refresh.c

print_cursor_names.c

main_resize.c

init_runtime.c

add_char.c

input_refresh.c

eat_left_char.c

eat_right_char.c

execute_command1.c

execute_command2.c

truncate_comm.c

create_log_file.c

load.c

catch.c

discard.c

select.c

full_select.c

include.c

chains.c

residue_ranges.c

extract_token.c

extract_serials.c

residue_names.c

atom_names.c

exclude.c

skip_keyword.c

apply_selection.c

show.c

hide.c

color_schemes.c

init_colors.c

color.c

special_select.c

select_hetero.c

select_element.c

select_atoms.c

quick_select.c

replace_command.c

atoms.c

bonds.c

execute_script.c

comm_rotate.c

comm_translate.c

comm_slab.c

comm_fading.c

log.c

prepare_backbone.c

background.c

text_background.c

text_foreground.c

change_slab.c

change_fading.c

full_colors.c

is_old.c

font.c

cpk.c

zebra.c

chain.c

color_hyphob.c

mix_colors.c

comm_backbone.c

hide_no_refresh.c

show_no_refresh.c

backbone.c

hybonds.c

generate_hybonds.c

hybond_style.c

show_backbone.c

hide_backbone.c

pdb_id.c

generate_plane.c

stereo.c

mono.c

position.c

copy_doubles.c

title.c

free_runtime.c

draw_titles.c

foreground.c

prepare_oc.c

select_complement.c

labels.c

draw_labels.c

assign_radii.c

spacefill.c

spacefill_color.c

draw_balls.c

center.c

save.c

write_line.c

big_spheres.c

tag.c

draw_tags.c

tag_position.c

button_press.c

control_click.c

identify_button.c

init_buttons.c

write_hints.c

extract_sequence.c

count_residues.c

sequence.c

parse_sequence.c

sequence_from.c

load_sequence.c

select_sequence.c

compare_sequences.c

dihedral_angles.c

extract_ncaco.c

phi_from_cncac.c

psi_from_ncaco.c

vector_product.c

absolute_value.c

scalar_product.c

omega_from_cacnca.c

select_cis_trans.c

ramachandran.c

draw_ramachandran.c

rama_frame.c

rama_mouse.c

read_fasta.c

save_sequence.c

wheel.c

wheel_top_view.c

wheel_bottom_view.c

hydrophobicity.c

weight_colors.c

angle.c

radius.c

select_sphere.c

disulfide_bonds.c

venn.c

draw_venn.c

spacefill2.c

sp2_color.c

save_seq_w_numbers.c

ssb.c

select_alternate.c

select_model.c

color_model.c

window.c

plot.c

draw_plots.c

weighted_hydrophobicity.c

average_hydrophobicity.c

init_hyphob.c

plot_mouse.c

project_planes.c

draw_planes.c

plane_extent.c

rotate_plane.c

translate_plane.c

comm_move.c

plane.c

select_above.c

select_below.c

big2.c

scale.c

pattern.c

dock.c

align_normal.c

align_complexes.c

docking_window.c

docking.xpm

docking_resize.c

docking_refresh.c

docking_project.c

list_exposed_polar.c

is_polar.c

representative_atoms.c

exclude_distant.c

draw_bottom.c

draw_top.c

copy_sequence.c

compare.c

draw_comparison.c

neighborhood.c

draw_balls2.c

comparison_mouse.c

structure.c

parse_sec_structure.c

copy_sec_structure.c

load_sec_structure.c

save_sec_structure.c

alloc_sec_structure.c

sec_structure_from.c

create.c

open_template_file.c

read_template_file.c

ex_template_residues.c

count_template_res.c

create_structure.c

required_atoms.c

copy_template_atoms.c

fix_chain.c

reset_phi.c

extract_hncac.c

phi_from_hncac.c

rotate_atom.c

parallel_part.c

reset_psi.c

build_chain.c

extract_ncac.c

translate_range.c

rotate_range.c

apply_structure.c

generate_phi_psi.c

extract_nca.c

extract_c.c

replace.c

extract_n.c

refresh_backbone.c

edit.c

draw_edit_symbol.c

draw_squid.c

squid.xpm

draw_seahorse.c

seahorse.xpm

are_atoms_bound.c

bond_partners.c

edit_phi.c

edit_psi.c

extract_cac.c

small_ramachandran.c

edit_omega.c

small_omega.c

extract_h.c

extract_o.c

psi_from_ncacn.c

is_standard.c

extract_four_atoms.c

chi1_from_ncacbcg.c

chi1_from_ncacbsg.c

chi1_from_ncacbcg1.c

chi1_from_ncacbog.c

chi1_from_ncacbog1.c

chi2_from_cacbcgcd.c

chi2_from_cacbcgod1.c

chi2_from_cacbcgnd1.c

chi2_from_cacbcg1cd.c

chi2_from_cacbcgcd1.c

chi2_from_cacbcgsd.c

chi3_from_cbcgcdne.c

chi3_from_cbcgcdoe1.c

chi3_from_cbcgcdce.c

chi3_from_cbcgsdce.c

chi4_from_cgcdnecz.c

chi4_from_cgcdcenz.c

chi5_from_cdnecznh1.c

is_part_of_ring.c

edit_bond.c

edit_chi2.c

extract_cacb.c

edit_chi1.c

extract_cbxg.c

resize_complex.c

membrane.c

inform_user.c

alpha_membrane.c

extract_ca.c

extract_vector.c

alpha_membrane_center.c

init_membrane.c

alpha_normal.c

project_membranes.c

draw_membranes.c

rotate_membrane.c

translate_membrane.c

select_triplet.c

set.c

set_phi.c

set_psi.c

set_omega.c

set_chi1.c

set_chi2.c

set_chi3.c

extract_cgxd.c

set_chi4.c

extract_cdxe.c

set_chi5.c

extract_necz.c

pick_bond.c

nice_bonds.c

covalent.c

covalent2.c

half_nice_bond.c

probe.c

small_atoms.c

small_atoms2.c

draw_sticks.c

half_stick.c

command_refresh.c

acceptor_dipole.c

donor_dipole.c

sticks.c

balls.c

blur.c

blur_main_window.c

group.c

beta_membrane.c

extract_cg.c

select_tm.c

parse_pattern.c

select_pattern.c

hyphob_function1.c

hyphob_function2.c

hyphob_function3.c

hyphob_function4.c

hyphob_function5.c

hyphob_function6.c

hyphob_function7.c

color_size.c

command_dump.c

is_aromatic.c

select_2c3.c

select_2cz3.c

select_2nz3.c

select_3c4.c

select_3cz4.c

select_3nz4.c

select_3c5.c

select_3cz5.c

select_3nz5.c

select_3p5.c

select_4c5.c

select_4cz5.c

select_4nz5.c

select_3c6.c

select_3cz6.c

select_3nz6.c

select_4c6.c

select_4cz6.c

select_4nz6.c

select_4p6.c

select_5c6.c

select_5cz6.c

select_5nz6.c

select_4c7.c

select_4cz7.c

select_4nz7.c

select_5c7.c

select_5cz7.c

select_5nz7.c

select_5p7.c

select_6p7.c

select_4c9.c

select_4cz9.c

select_4nz9.c

select_5c9.c

select_5cz9.c

select_5nz9.c

color_weighted.c

libraries


manual